Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022328.1:61709706-61717194[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 6.9e-06 0.0012 21.0 0.9 1 23 68 91 68 91 0.97

2 17 2.5e-05 0.0045 19.3 5.5 1 23 96 118 96 118 0.99

3 17 1.5e-06 0.00028 23.1 3.8 1 23 124 146 124 146 0.98

4 17 1.2e-06 0.00022 23.3 0.7 1 23 152 174 152 174 0.97

5 17 1.6e-07 2.9e-05 26.2 2.5 1 23 180 202 180 202 0.99

6 17 1.1e-06 0.0002 23.5 2.6 1 23 208 230 208 230 0.97

7 17 2.9e-06 0.00053 22.2 0.2 1 23 236 258 236 258 0.98

8 17 0.017 3.1 10.3 2.0 1 23 264 286 264 287 0.96

9 17 3.6e-05 0.0066 18.7 1.4 1 23 292 314 292 314 0.98

10 17 2.5e-05 0.0045 19.3 4.3 3 23 322 342 320 342 0.96

11 17 0.18 32 7.1 4.2 1 23 348 370 348 370 0.97

12 17 2.5e-06 0.00046 22.4 1.7 1 23 376 398 376 398 0.98

13 17 0.00021 0.038 16.3 1.9 1 23 404 426 404 426 0.98

14 17 4.4e-05 0.008 18.5 1.9 1 23 432 454 432 454 0.98

15 17 0.00018 0.032 16.6 0.8 1 23 460 482 460 482 0.97

16 17 3.4e-06 0.00061 22.0 0.8 1 23 488 510 488 510 0.98

17 17 0.0011 0.19 14.1 0.7 1 20 516 535 516 538 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	6.9e-06	0.0012	21.0	0.9	1	23	68	91	68	91	0.97
2	17	2.5e-05	0.0045	19.3	5.5	1	23	96	118	96	118	0.99
3	17	1.5e-06	0.00028	23.1	3.8	1	23	124	146	124	146	0.98
4	17	1.2e-06	0.00022	23.3	0.7	1	23	152	174	152	174	0.97
5	17	1.6e-07	2.9e-05	26.2	2.5	1	23	180	202	180	202	0.99
6	17	1.1e-06	0.0002	23.5	2.6	1	23	208	230	208	230	0.97
7	17	2.9e-06	0.00053	22.2	0.2	1	23	236	258	236	258	0.98
8	17	0.017	3.1	10.3	2.0	1	23	264	286	264	287	0.96
9	17	3.6e-05	0.0066	18.7	1.4	1	23	292	314	292	314	0.98
10	17	2.5e-05	0.0045	19.3	4.3	3	23	322	342	320	342	0.96
11	17	0.18	32	7.1	4.2	1	23	348	370	348	370	0.97
12	17	2.5e-06	0.00046	22.4	1.7	1	23	376	398	376	398	0.98
13	17	0.00021	0.038	16.3	1.9	1	23	404	426	404	426	0.98
14	17	4.4e-05	0.008	18.5	1.9	1	23	432	454	432	454	0.98
15	17	0.00018	0.032	16.6	0.8	1	23	460	482	460	482	0.97
16	17	3.4e-06	0.00061	22.0	0.8	1	23	488	510	488	510	0.98
17	17	0.0011	0.19	14.1	0.7	1	20	516	535	516	538	0.94

Sequence Information

Coding Sequence: ATGGTGGGACGCTGGAGAACTCTGACTCGTCCAGGAAATCCAGGGTGGAAGTCAGACTTACTATCAACATCGGATGAACAGGGAAAGCATAGTCACTTCCATGATGTAGAACAATCATTTGAAAGTCAAACGTCCAGTCAAACATTAAAACAATTAGAAAATAGTAAAACATACAGATCTATACAACATGATAAGCAAAGACATTCGTGTGATGTGTGTCCAAAAACATTTATATCTTTAGACCTTCTTGAAAAACACAAACGCCGTCCCCATAAAGTTAGACCATATGTGTGTAATGTTTGTCAGAAATCATTTACTAAAAATTGTCATCTAGACAATCATCAGCGTGTCCATAGCGGAGTGAAACCATTCGAATGTAGTGTATGCAAGAAAACATTCTCACAAATTAGTCATCTAAAGAGACACGAACAGACTCACAGTGGCCAAAAACCATTCGCGTGCGATATTTGCCAAAAAAGATTCACTACGGTGGGAAATCTAAAATCACACCAACTAACACATAGTGACAAGAAACCGTATGAATGTGATGTTTGTCAGAAATCATTTACTCAAATTAGTCATCTGAAAAATCATCAGCGTGTCCATAGCGGAGTAAAACCATTCGAATGTAGTGTATGCAAGAAAACATTCACACAGAATGGTCATCTGAAGAGACACGAACTAATTCACACTGGCCGAAGACCATACGCGTGCGATGTTTGCCAAAAAGCTTTTTCTATTTTGGGTAATCTACAATCACACCAACGCACACATAGTAACGAAAAACCGTATGAATGTGACGTATGTCagataaaattcaaatggataCAAACCTTAAACAAACACAAGCGTATTCATCATGGCATTAGACCATACGTTTGTGATATATGCCAAGAAGCTTTTActcacaatatttatttattgagacACAAAAGTACTCATGGTTGTGAGAAACCTCTCGCATGTGATGTATGTGAAAAAAGATTTAACCATAGTAGTCATTTAAAGATACATAAACGAAGTCATAATGACATTAAGCCACATTCGTGTGATGTATGTCAGAAGAAATTAAGATGTGTTAAAAGTCTGAATGAACACATGCGCATTCATAGTGGGATTGAACCATTCTCGTGTGATGTCTGTCAAAAAGAATTCTTTCAGAAAGCAAATTTAAATAGACACAAACGAATACATAGTGGTGAAAAATTATTCCATTGTGATGTATgccaaaaaaaattcatttactCTGCTGACCTTGATAATCACAAACGGATACATAATAACGAGAAACCGTTTGAATGTGATGTCTGCTATAAGAAATTCACACaggttaataatttaaatacacACAAACGTCTCCACAGTGGCATAAAACCATTCGCGTGTGATGTATGTCAAAAAACATTCCCTCTAAATCAATATCTAATCAAACACAAAAGTACACATACTGGAGAAAAACCCTATGCTTGTGATGAAtgtgataaaaaattcaatcgaATGGAGTATCTGAATGCGCACAAGCGGATGCACACTGGAAGTAAACCATACGAATGTGAAATATGTCAGGAGAAATTTAGATACCGAAGAAGTCTAGATAGACACAAGCCAATCCACAGTGGTATTAAAGCAGTATGGATGTGA
Protein Sequence: MVGRWRTLTRPGNPGWKSDLLSTSDEQGKHSHFHDVEQSFESQTSSQTLKQLENSKTYRSIQHDKQRHSCDVCPKTFISLDLLEKHKRRPHKVRPYVCNVCQKSFTKNCHLDNHQRVHSGVKPFECSVCKKTFSQISHLKRHEQTHSGQKPFACDICQKRFTTVGNLKSHQLTHSDKKPYECDVCQKSFTQISHLKNHQRVHSGVKPFECSVCKKTFTQNGHLKRHELIHTGRRPYACDVCQKAFSILGNLQSHQRTHSNEKPYECDVCQIKFKWIQTLNKHKRIHHGIRPYVCDICQEAFTHNIYLLRHKSTHGCEKPLACDVCEKRFNHSSHLKIHKRSHNDIKPHSCDVCQKKLRCVKSLNEHMRIHSGIEPFSCDVCQKEFFQKANLNRHKRIHSGEKLFHCDVCQKKFIYSADLDNHKRIHNNEKPFECDVCYKKFTQVNNLNTHKRLHSGIKPFACDVCQKTFPLNQYLIKHKSTHTGEKPYACDECDKKFNRMEYLNAHKRMHTGSKPYECEICQEKFRYRRSLDRHKPIHSGIKAVWM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -