Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:50604320-50606768[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0018 0.32 13.4 1.9 3 23 29 49 27 49 0.96

2 17 0.00012 0.022 17.1 0.6 2 23 55 76 54 76 0.94

3 17 0.00048 0.087 15.2 2.0 1 23 82 105 82 105 0.97

4 17 0.0011 0.21 14.0 1.9 2 23 112 134 111 134 0.90

5 17 1.4e-06 0.00026 23.2 1.1 1 23 139 161 139 161 0.98

6 17 5.2e-07 9.5e-05 24.5 0.8 1 23 170 193 170 193 0.96

7 17 3.8e-05 0.0069 18.7 0.3 1 23 201 223 201 223 0.98

8 17 5.5e-07 0.0001 24.4 1.3 1 23 229 251 229 251 0.99

9 17 4e-07 7.2e-05 24.9 1.3 1 23 257 279 257 279 0.98

10 17 2.1e-05 0.0037 19.5 0.7 2 23 300 321 299 321 0.96

11 17 0.00012 0.021 17.1 0.1 1 23 327 350 327 350 0.96

12 17 2e-06 0.00037 22.7 0.2 1 23 355 377 355 377 0.98

13 17 0.0014 0.26 13.7 0.2 1 23 384 407 384 407 0.93

14 17 0.00015 0.027 16.8 1.0 1 22 412 433 412 435 0.89

15 17 6e-06 0.0011 21.2 0.2 2 23 442 463 441 463 0.98

16 17 0.0003 0.054 15.8 6.2 1 23 469 491 469 491 0.98

17 17 4.1e-06 0.00075 21.7 1.9 1 23 497 519 497 519 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0018	0.32	13.4	1.9	3	23	29	49	27	49	0.96
2	17	0.00012	0.022	17.1	0.6	2	23	55	76	54	76	0.94
3	17	0.00048	0.087	15.2	2.0	1	23	82	105	82	105	0.97
4	17	0.0011	0.21	14.0	1.9	2	23	112	134	111	134	0.90
5	17	1.4e-06	0.00026	23.2	1.1	1	23	139	161	139	161	0.98
6	17	5.2e-07	9.5e-05	24.5	0.8	1	23	170	193	170	193	0.96
7	17	3.8e-05	0.0069	18.7	0.3	1	23	201	223	201	223	0.98
8	17	5.5e-07	0.0001	24.4	1.3	1	23	229	251	229	251	0.99
9	17	4e-07	7.2e-05	24.9	1.3	1	23	257	279	257	279	0.98
10	17	2.1e-05	0.0037	19.5	0.7	2	23	300	321	299	321	0.96
11	17	0.00012	0.021	17.1	0.1	1	23	327	350	327	350	0.96
12	17	2e-06	0.00037	22.7	0.2	1	23	355	377	355	377	0.98
13	17	0.0014	0.26	13.7	0.2	1	23	384	407	384	407	0.93
14	17	0.00015	0.027	16.8	1.0	1	22	412	433	412	435	0.89
15	17	6e-06	0.0011	21.2	0.2	2	23	442	463	441	463	0.98
16	17	0.0003	0.054	15.8	6.2	1	23	469	491	469	491	0.98
17	17	4.1e-06	0.00075	21.7	1.9	1	23	497	519	497	519	0.98

Sequence Information

Coding Sequence: ATGTCCTGGTGTCAAGTTCCAATAAAAGTTGAGCCCACCTCAAACAACATTGAGCCTCAGCCTAAAACTCAGTCAGACACGATTTGTCGACTTTGTAATAAAGGATTTACTACTAGACGTATGTATATACTTCACAGAAGGAATCATaaagaaagaaatatgaaatgCGAAAAATGTGGACAAAAATTTCGGTATTTATATCAACTAAAAGTTCATGAAGGTGTGCATGGAGCAACTCGTAAATTTACTTGcgatttttgtaataaattatttactacTAAAGGACTACTAGATTCACATAAGAAAAGAATACATAATAGAGATTATCGAATACGTTGCGATGAATGTGGTAAAGGATTCTTTTTCACTTCCCAATTGAACCATCACAAATTTTTAATACATCTTGGAAAAAGATATATCTGCACTGTCTGCCAGAAGGAATACAGAACATCTggatatttaaaaattcatatgaaGACTCATACTACCGACTATGTAAAGAAACAATATAAATGTGAATACTGCGGAAAAGTATACGAATCGCAAAAAAACTTTTTACGCCATATTAAGGCAGTACATGAACAAAAACCACTAGATATTTACATGTGCGATGTTTGTGGCAAAAGAGTTACTTCAGCAAACAGTTTAAGAGACCACAAAATGATGCACTCGGGTGATAAACCTTTCCAATGTCCCACTTGTAGAAAAGCATTTAAcactcaaaaatatctcacCGTTCATTTGCGTGTTCATACGAAGGAGAAGCCATATGTGTGCGATGAATGTGGAAAATGTTTTACGCAAGCAAGTCCTTTAAAACTGCACAGGAGACTGCATACAGGGGAAAAACCCTATAATTCTAGAGAGCACGAAATAAGTCATGATCAACCAGATATTAGTTGCTATTTATGTGGAAAGCGATTCGCACGACAACAATACTTGTTAATCCACTTGAAGCGACAcgaaaaattttttagattcaACTGTGAAGAATGCGAAAAGGGTTATATTTCCCAACAAGAATTAAGTAGACACATTGAAGTCGCACATCGCACTGTGCACTACCCTTGTGAAGTTTGTGGAAAAGATTTCAGAAGTCGTGCTTACCTAATGCTTCATGTAAAAACACATGTTATCAAGAAACCGGAATTTAAATGTGATAAATGCGACAAAATTTACACTTCTGTTAAAGGAGTACAAAGACATGCAGATATTGTTCAtggaaatcaacaatttatGTGTGACGAATGTGGTAAAACTCTTACAACAAATAGAAGCTTGAACACGCATAAATTCGCAACCCATAAAAGACTCAAACCTGTCAAGTGCCCCATTTGTGAAAAACGGTTCAGCTTACAAAAATATCTAGCTCTTCATATACGTGTACATACAAAAGAAAAGCCTTATGAATGTGAGGATTGTTGTAAATGTTTTACCCAAAAAAGTTCGCTATCGATTCATAGAAGATTGCATACAGGAGAAAGACCGTTCAGCTGTAATCTTTGTTATAAATCTTTTACTTCAAAAAGTGCACTAACCTTACATACCAAAGTACATGGTACTGCTTTGTATACCattaaaaagaaagaaatattataa
Protein Sequence: MSWCQVPIKVEPTSNNIEPQPKTQSDTICRLCNKGFTTRRMYILHRRNHKERNMKCEKCGQKFRYLYQLKVHEGVHGATRKFTCDFCNKLFTTKGLLDSHKKRIHNRDYRIRCDECGKGFFFTSQLNHHKFLIHLGKRYICTVCQKEYRTSGYLKIHMKTHTTDYVKKQYKCEYCGKVYESQKNFLRHIKAVHEQKPLDIYMCDVCGKRVTSANSLRDHKMMHSGDKPFQCPTCRKAFNTQKYLTVHLRVHTKEKPYVCDECGKCFTQASPLKLHRRLHTGEKPYNSREHEISHDQPDISCYLCGKRFARQQYLLIHLKRHEKFFRFNCEECEKGYISQQELSRHIEVAHRTVHYPCEVCGKDFRSRAYLMLHVKTHVIKKPEFKCDKCDKIYTSVKGVQRHADIVHGNQQFMCDECGKTLTTNRSLNTHKFATHKRLKPVKCPICEKRFSLQKYLALHIRVHTKEKPYECEDCCKCFTQKSSLSIHRRLHTGERPFSCNLCYKSFTSKSALTLHTKVHGTALYTIKKKEIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -