Basic Information

Insect: Dromius quadrimaculatus
Gene Symbol: -
Assembly: GCA_963989225.1
Location: OZ022329.1:50649359-50653081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.064 12 8.5 0.3 1 23 8 30 8 30 0.97

2 32 0.027 5 9.7 3.8 1 23 38 60 38 60 0.96

3 32 0.00019 0.035 16.5 0.1 3 23 68 88 66 88 0.96

4 32 3.4e-07 6.3e-05 25.1 1.9 2 23 95 116 94 116 0.97

5 32 6.1e-07 0.00011 24.3 0.6 1 23 122 144 122 144 0.98

6 32 3.4e-05 0.0061 18.8 0.2 1 23 150 172 150 172 0.97

7 32 0.00042 0.077 15.4 5.0 1 23 178 200 178 200 0.99

8 32 0.032 5.8 9.5 0.5 1 23 206 228 206 228 0.95

9 32 2.5 4.5e+02 3.5 0.7 1 9 234 242 234 245 0.90

10 32 0.003 0.54 12.7 1.1 1 20 275 294 275 296 0.89

11 32 0.0011 0.2 14.1 0.5 2 23 304 326 303 326 0.96

12 32 2.5 4.6e+02 3.5 0.3 1 23 330 352 330 352 0.96

13 32 0.00028 0.051 15.9 1.3 1 23 360 382 360 382 0.98

14 32 1.6e-05 0.0028 19.9 0.2 3 23 390 410 388 410 0.97

15 32 3.6e-07 6.6e-05 25.0 0.6 2 23 417 438 416 438 0.97

16 32 2.7e-06 0.00049 22.3 0.6 1 23 444 466 444 466 0.97

17 32 2.4e-05 0.0043 19.3 1.8 1 23 472 494 472 494 0.96

18 32 0.34 61 6.2 7.5 1 23 500 522 500 522 0.96

19 32 5.6e-05 0.01 18.1 2.4 1 23 528 550 528 550 0.97

20 32 0.0011 0.2 14.1 5.1 1 23 556 578 556 578 0.98

21 32 1.6e-05 0.0029 19.9 2.9 1 23 584 606 584 606 0.96

22 32 0.034 6.2 9.4 0.6 1 23 612 634 612 634 0.96

23 32 0.001 0.18 14.2 2.5 1 23 641 663 641 663 0.99

24 32 5.4e-05 0.0099 18.2 1.5 2 23 670 691 669 691 0.96

25 32 1.3e-07 2.4e-05 26.4 0.5 2 23 697 718 697 718 0.97

26 32 5.9e-05 0.011 18.1 4.9 1 23 724 747 724 747 0.97

27 32 2.7e-05 0.005 19.1 1.5 1 23 753 775 753 775 0.96

28 32 0.024 4.4 9.8 5.6 1 23 781 803 781 803 0.97

29 32 0.00022 0.04 16.3 2.4 1 23 809 831 809 831 0.95

30 32 0.00043 0.078 15.3 4.7 1 23 837 859 837 859 0.98

31 32 5.8e-05 0.011 18.1 1.3 1 23 865 887 865 887 0.96

32 32 2.2e-05 0.0041 19.4 6.1 1 23 892 914 892 915 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.064	12	8.5	0.3	1	23	8	30	8	30	0.97
2	32	0.027	5	9.7	3.8	1	23	38	60	38	60	0.96
3	32	0.00019	0.035	16.5	0.1	3	23	68	88	66	88	0.96
4	32	3.4e-07	6.3e-05	25.1	1.9	2	23	95	116	94	116	0.97
5	32	6.1e-07	0.00011	24.3	0.6	1	23	122	144	122	144	0.98
6	32	3.4e-05	0.0061	18.8	0.2	1	23	150	172	150	172	0.97
7	32	0.00042	0.077	15.4	5.0	1	23	178	200	178	200	0.99
8	32	0.032	5.8	9.5	0.5	1	23	206	228	206	228	0.95
9	32	2.5	4.5e+02	3.5	0.7	1	9	234	242	234	245	0.90
10	32	0.003	0.54	12.7	1.1	1	20	275	294	275	296	0.89
11	32	0.0011	0.2	14.1	0.5	2	23	304	326	303	326	0.96
12	32	2.5	4.6e+02	3.5	0.3	1	23	330	352	330	352	0.96
13	32	0.00028	0.051	15.9	1.3	1	23	360	382	360	382	0.98
14	32	1.6e-05	0.0028	19.9	0.2	3	23	390	410	388	410	0.97
15	32	3.6e-07	6.6e-05	25.0	0.6	2	23	417	438	416	438	0.97
16	32	2.7e-06	0.00049	22.3	0.6	1	23	444	466	444	466	0.97
17	32	2.4e-05	0.0043	19.3	1.8	1	23	472	494	472	494	0.96
18	32	0.34	61	6.2	7.5	1	23	500	522	500	522	0.96
19	32	5.6e-05	0.01	18.1	2.4	1	23	528	550	528	550	0.97
20	32	0.0011	0.2	14.1	5.1	1	23	556	578	556	578	0.98
21	32	1.6e-05	0.0029	19.9	2.9	1	23	584	606	584	606	0.96
22	32	0.034	6.2	9.4	0.6	1	23	612	634	612	634	0.96
23	32	0.001	0.18	14.2	2.5	1	23	641	663	641	663	0.99
24	32	5.4e-05	0.0099	18.2	1.5	2	23	670	691	669	691	0.96
25	32	1.3e-07	2.4e-05	26.4	0.5	2	23	697	718	697	718	0.97
26	32	5.9e-05	0.011	18.1	4.9	1	23	724	747	724	747	0.97
27	32	2.7e-05	0.005	19.1	1.5	1	23	753	775	753	775	0.96
28	32	0.024	4.4	9.8	5.6	1	23	781	803	781	803	0.97
29	32	0.00022	0.04	16.3	2.4	1	23	809	831	809	831	0.95
30	32	0.00043	0.078	15.3	4.7	1	23	837	859	837	859	0.98
31	32	5.8e-05	0.011	18.1	1.3	1	23	865	887	865	887	0.96
32	32	2.2e-05	0.0041	19.4	6.1	1	23	892	914	892	915	0.94

Sequence Information

Coding Sequence: ATGAGAGATCATGACAAGAATTTCAAGTGTTACAGTTGCGGGCAAGAATTCGAAAATGGAAACGACATAAAGAATCATGCAAATATTCACAATACAGATCCAGCTGCAAGATTTCAATGCGAATTTTGTGGAAGAAAATTTGTTACTAAACAAGCTTCTCATACACATCGTAAGATACATTTAGGtgtacgttcaataatttgtgaAGTTTGTGGAAAAAAAATAGCTAGTAAAGATAAACTAGTTCTGCACATGCGCATACATAGCGGCGAGAAGCCTGTGTCTTGTGAACACTGCGGAAGAAGTTTTACTACACCTTATTCGTTAACGGTTCATAAGAGAACCCATACTGGCGAAAAACCATATGCTTGTAGTGTTTGCGGAAGAAATTTCAGTCAGAAAAGTGCTTTAAATACTCATCTTAATAGACATACTGGGGAGAAACCATTTTCTTGTTCGCTTTGTGATAAAAGGTTCACTATTCGTGGGGAGCTTAAAGCTCATTTAATTGTTCATAGCGGGGAGCTACTTTACACTTGTACTCATTGTGATAGAAAATTTAGTACTAATAAAAGTCGGCTTATACATGAACGTACTCATACGGGAGAAAAACCATTTTCTTGTAAAACTTGTGGTGAAAAATTTGTTGCTAAAGAATACGCAAAAATGCATGAAATTAGACATAAAGATAGTAAACCGTTTCACTGTCCACATTGCGATAAAAAAGCGGATGAACATTATAAAAACTCCAAAGGAGCTGAATCAAAGCACTGCgcattttcattcaaaaaaataatgctCAAATTACCAAAAGGCAAATCATTTAAATGTAAGATTTGTAATAAAGAATTTACAAACAGACGATCTTCTGAAAAACACGTTGAACGATTTCCGCCAGAAATTATTGTCCCTTGCCAAAGATGCGACAGAAAATTCCACAACCAAGAGGCATTATTGGTACACGTAATGACGGATCATGATAAGAGTTTCAAATGTTACAGCTGTGCACAAAAGTTTGAAAGTGGGAATGAAGTAAAAGAACATGCAAATATTCACAATTCAGATTCAGCAGCAAGATTTCAATGTGAATTTTGTGGGAAACGATTTTCTGTGAGGCAATCTGCATTTATACATCGCCGTATACATTTAGATATGCGTTCAATCATATGTGATATTTGTGGAAAGAAATTATCTAGTAAAGATAAGTTGGTTTTACACATGCGCATTCATAAAGGCGAGAAACCTTTATCTTGTGAGCAATGTGGAAGAAATTTTACAACATCTTATTCATTGAATGTTCATATGAGAGTTCATACTGGCGAGAAACCATATGTTTGTAATTTGTGCGGCAAACGGTTTAGTCAGAAAAGCGCTTTAAATGGTCACGTCTACAGACATACTGGAGAAAAACCATTTTCTTGTTCACTgtgcaataaaaaattcagcagCCGAGGTGATCTAAAAGCTCACTTGTTTTATCACAGAGGAGAACAAACTTTTTGTTGTTCACATTGtgataaaaaatttgtttgcaATAAAAGTCTTGTGATACATGAACGTCTGCATACAGGAGAAAAGCCGTTTTCATGtaatatttgtggagaaaaaTTCAGATCTAAAGATCATGCGAAAAAACATGAAATTCGACATGTAGATAGCAAGCCATATCACTGTCCTCATTGTGAGAAAAAATATAGCTCAAAAAAAATCCTCAATATTCATATTAGAAAACATACTGGAGAAAAACCTTTCAGTTGTGAAGTTTGtgataaaaagtttatttcCAGGACTCATCTTAAAACACATATGTATGGACATACAGACGAAAAGCCTCATGCCTGTTCTGTttgttcaaaaatttttaatgatgGAACTAGCGTAAAGGAGCATGCTAAAATGCACTCTGTTGATTTTACGAATTATCAGTGTGAATTATGTGGAGAATATTTTCACAGTAAACAATCCGTATTTGTTCATCAACGATCACATTTGGATTTGTTATCACTAATGTGTGatatttgtgaagaaaagtTTTGTAGtaaagataaattattgaaacataTGCTTATTCATAAAGAAAAGAAACCAGTATGTGAACAATGTGGAAAGAAGTTCTCAACAGCAAGCTCTTTAACTCTTCATATGAGAGTtcatactggtgaaaaaccgTATGCTTGTCATCATTGTGAAAAACGTTTTAGCCAGAAAAACGTATTGACTATTCATATCAGACGACGTCATACAGGAGAGAAGCCATTTTCTTGTTCATTgtgcaataaaaaattcagcagCCGAGGTGAACTAACAGCTCATTTGTTCTATCATAAAGGAGAAAAAACTTTTTGTTGTTCATACtgtgataaaaaatttatttgtaaaagcaGTCTTGTGATACATGAACGTCTGCATACGGGGCAAAAGCCTTTTTCGTGTAATATTTGTGGAGAGAAATTCAGATCTAAAAATCATGCGAAAAGACATGAAATTCAACATGCAGATAGCAAGCCATACCATTGTCCTCATTGTGAGAAAAAATATAGCTCAAAAAAAATCCTCAATATTCATATTAGGACACATACTGGAGAAAAGCCTTACAGTTGTGAAGTTtgtgatgaaaaatttatttctaggaTTCATCTTAAAACACATATGTATGGACATACTGAAAAACCTCATGCCTGTTCTGTATGCGGAAAATGTTACACTAGATCGGCATCTTTGAAAAGACATGAACAAACTCATCATAACAATCTTGAATGA
Protein Sequence: MRDHDKNFKCYSCGQEFENGNDIKNHANIHNTDPAARFQCEFCGRKFVTKQASHTHRKIHLGVRSIICEVCGKKIASKDKLVLHMRIHSGEKPVSCEHCGRSFTTPYSLTVHKRTHTGEKPYACSVCGRNFSQKSALNTHLNRHTGEKPFSCSLCDKRFTIRGELKAHLIVHSGELLYTCTHCDRKFSTNKSRLIHERTHTGEKPFSCKTCGEKFVAKEYAKMHEIRHKDSKPFHCPHCDKKADEHYKNSKGAESKHCAFSFKKIMLKLPKGKSFKCKICNKEFTNRRSSEKHVERFPPEIIVPCQRCDRKFHNQEALLVHVMTDHDKSFKCYSCAQKFESGNEVKEHANIHNSDSAARFQCEFCGKRFSVRQSAFIHRRIHLDMRSIICDICGKKLSSKDKLVLHMRIHKGEKPLSCEQCGRNFTTSYSLNVHMRVHTGEKPYVCNLCGKRFSQKSALNGHVYRHTGEKPFSCSLCNKKFSSRGDLKAHLFYHRGEQTFCCSHCDKKFVCNKSLVIHERLHTGEKPFSCNICGEKFRSKDHAKKHEIRHVDSKPYHCPHCEKKYSSKKILNIHIRKHTGEKPFSCEVCDKKFISRTHLKTHMYGHTDEKPHACSVCSKIFNDGTSVKEHAKMHSVDFTNYQCELCGEYFHSKQSVFVHQRSHLDLLSLMCDICEEKFCSKDKLLKHMLIHKEKKPVCEQCGKKFSTASSLTLHMRVHTGEKPYACHHCEKRFSQKNVLTIHIRRRHTGEKPFSCSLCNKKFSSRGELTAHLFYHKGEKTFCCSYCDKKFICKSSLVIHERLHTGQKPFSCNICGEKFRSKNHAKRHEIQHADSKPYHCPHCEKKYSSKKILNIHIRTHTGEKPYSCEVCDEKFISRIHLKTHMYGHTEKPHACSVCGKCYTRSASLKRHEQTHHNNLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -