Basic Information

Gene Symbol
Trerf1
Assembly
GCA_963989225.1
Location
OZ022328.1:4154086-4181959[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-12 2.5e-08 35.8 0.1 3 46 1202 1245 1200 1245 0.96

Sequence Information

Coding Sequence
ATGGCGAAGTTCTTGAGTAAAGTGGAGATTGATCAGAACGTTTGCTTGCATGTTGCAGTGCTCGTTGCCGAAGAGCAGAAGAAGAACGGAAATGGGGCTGCAGAAGTGGTGAAACTCACGGTGAAGAGAGCACGGCCGAAGGCTACATCCCCCAACCGGCAGGGGCCCCAGCAGTGTcagGTGTGTGCCAAGGTGTTCGGAAACGCGTCAGCTTTAGCGAAACACAAATTGACCCATAGTGATGAACGAAAATACGTCTGCACCATGTGCGGAAAAGCTTTCAAACGGCAGGATCACCTAAACGGCCACATGCTGACCCACCGCAACAAGAAGCCGTACGAATGTAAAGCGGAGGGATGCGGCAAATCATACTGCGATGCCAGGTCTCTTCGGCGACACACGGAGAACCACCATAGCGCGGGTACCACCCCCCAAGCAGCTAACAGCACGTCTAGTAGTAACACGACGGTGAGTGCAACTACGAGTATGTCACCAGCACAAGGTGCTGCTGCAGGAGATGCTGCAAGTCCGCATGGGGCTAGTTGCATTCAATACGCGCCTGCGCCGACGACGACGGCTACGGCAACTACCACCACGACGACCGGAGGGAAGAGTCAGCTGCAGCAGCTGCTCGCCACCGAACCTGCCAAgGGAGGAGCAGGCGGAAATAATGACGGCCTAACGAAGCAACAATTAGACTTGATCCACCAAATCATGGAGCAAACCCAAAGGCAATCGCAACCTGTCTCAAAATCACCTACGAAAACCTCCTCGAAACCTGCCTCCAAGCAACCTACCAAAGTTCAACGGATTTGGACATCAACGTCACAACAAACGTCGTCTTCAAAAACGAACACAAATGGCAGTTCAAACTCAAACTCTGCAAAATCCTCGAATGTAGTATCCGGCTCTCCATCCTCGGCGTCGACTGGTTCGACTGCCGCATCAAATTCTACCTCTGCTACAGCTTCTGCAGCAGCAAAACCCGAGCTCAAACCCGTAGAATGTAACCTGTGccacagaaaattcaaaaatattcctgCCCTCAATGGACATATGCGTCTGCACGGGGGCTATTTCAAAAAAGatgcagaaaataaaaaatgtgaaaagaaaGAGAGCTCGGGACCGCCGTTGCAAACTGCAAGTGTCAGCGTGAGAGCTTTGATTGAAGAGAAAATAATAAGTAAAAGAACAACGAATTCGTCGGCTGTTCAGACGACGAGCACGGCTACCACGACGACGACGGCAGCCACGACTCCCACTGAGAGCACCGCTCCGCCATTATATCCTCTTTCCATGCATTCCACGGGCGATGCGGACGCCAAGGTGACGTCGTTCGTGGTACCCGCACCGCCTGCCCCTCAACCAACCTCTGCAGCCACCACCACCTCTGTACCAACTCCGGCCGCAGTCATTGCAGCACGCAGACATTCCGACGCTGAATTCACTGTCCCTCGGGCACCTTCCAATACGGCTTCTACCGCCGCCTCTGTGCAGCAAGAAGCCGAAGCTCTTGCGGACATGATCCTCAAACGAGGAGGCAAAGTATCTGTAAAACGAGCCATCTCTGATCCCGGAAGACCTTCCCAGCAAATACAACTCCAATTTCAACCTGGAGATGCGTTTGCTCTAGCTGGAGTGACGTACCAAGCAGAAGACGTCGGGTATTTATCGCCGAGTCTTCAAGACGATGTTTTCCATCATGTACCGGATACTATGTTACTACAGGGTGTTGATGCGCAGCAGCTAGTACAAATACAAGCCTCGTTATTACAAGAACAAGACGAGCAACTTCAAGATATTGCCTCCTTGGAGGATTATGCGACGGTAACAGCAGGTTTGCAAGAAACTGTGGTGGATTCTGCAACATATCAAGCCAGACAAGTGGTAAACCAAGAACTGCAAGCCGTACTAGATTCCCCCTTACCTGAAagtttggcagaattcagtacGTTCCACACAAGTAATTTGGACATGCCCTCTccttcataccaaactcaatcACCGGCGCAACAATTCACCAACTCGCCGCACACATCACTAGCAGCACAATCACCTTTGCAGTCACCTTTGATAAGACATGATTCACCAGGTTTTGCGTACCCTACACCCCCTGCCAGTCATGAGGGGCAAAGTCCTTCTTTTGTGCAAACATCCCTTTTACCAATGATATCACCGCAACAAACCACCGATTTTGTACAAAATGTCAATGCGACAAGAGATCTAGAAGAACCTCCCCAGGCATCGTCACCACTTTCAGCAGCGTTTTTTACTTCAACGATGTCAAGTGCAGCTGCAGTTGAGGAAGCCTTGGAAGAGGTATTACCTGGTGAAAGTATATCTCCTGACGATATTTACCCCTCTTTATCAAATTCACCTCCTCCCCAGTCACCTATTTCAGTGGCAATGACTCCAGTTCCCTCTCCTTTATCAAGTATACCCACTTCTACGTCAGTATCATCCCCGAGGCCTCCTGTATCGTTCACATCAGTTACAACAAACGTTACTTTCCCGATGTCACCTCATTACACATTACAATCTCAAATGATGCCCAACTCGGATGACCCTCTCCTTTCAAGCAGCCCCAAAGATTTCTCAACAAGAAAACGATTCGAATTTGGGGGGCTACAATCTTTGAAGATTGTTGGGAATGGATACATCGATTTTGGGAACCCCAATCTTGCTGGAATATTGGTAGACAATAATGGGGAGCTGAAATTCATTCAAACTTCCGGAGGTCCGATCCAGGCGAGAAATTTGATAGTTACTACAAATGTACCATCTCCTAACACAACGATAAGAGAGGATGTTAAAAATGTTCCTTTGCAGAGATTGCAGAAAATTAGCAAAACAACGCAGTGTACAATatcgaaaaataatattcaaaggCCTAAGCTTCACGTTGCTGTAGATAACGTCAAGTCCGAAGACTCTGATGATGTTTTTCTTAGCCCCACAACCATTCCGGCAAGTCCTAATAGACTATCCCGGAAAAGGCCGCGATCGGAACCCCTTCAACTTCCAGTTGTTCATCAGTCGCGTCTTCGGGCAGCCAGAGGACGACCTCCAGGTGCTGCACCCTACACCCCTTTACCAATGTTGAATCCTTCTCGACACGGGCCTGGATTATATTGGAATGCCAAATTGAAGACTACCCTACGTATGTTTTCTATTCCGCCTATGGTTCAGATTCTAATTGATTATTTTACAGATAATCAAGATGATAGTTCTATATCATCGACTTGTGAATCAATTCCAGAAAGTGATTCAACCCCTCATATAAACGTTGGTGCTCATTATCAATGCACAATACCTCCTTGTAAAGTACTGAGGGATAAAGATGACAGAGAACCAACGTACGAACATCTCCTTTGGGATCCTGGTATTAACAATTATTGCACAGATAATGAAGTTGATATGTATTTGGATTTCGCATGTTGCGCAGCCGTTCCAGGTGGCGGTCGAAATAAGGAATATGCCTTACATCTGCTTCATATGTGCGGGGGGAATATCCACGAAGCAATGTTGAAATTAATGCAACCAACTCCATGTTTGCCACCTGATCACCCGTTACTTCATTATCACTACTCCGAGAGCGATCAGTGGACGATATCAGAGACAGAAACCTTCCATCAAGCTATCCAGAAGCATGATAAAGACTTCTTTAGTATTGCGAAAGAAGTTGGTTCGAAAACCGTCAAACAATGTATACAGTTCTACTACGTCTGGAAAAAAGTTTGTGTGGATGAATACAGACGGCTGCGATCACATCGAGAACAAAGAGGACACCTGCATGGGAAATCGAACTCCAACATGGATTTTGAAGAAAAACCGTGCCTGGATGCCAAACTACTTGGAATTGCTGAAACGGAATCACCCATGTCCGTGACAGACCACCGGCACTTCAGTTGCGACTACTCGGATTGTTCGGCTAGTTTCAACTCTCGCGCGGCTCTAACAGGCCACATCCGCATCCACAGCGGAACCGGTGTACGACGGTCTCCCACCCCCACATCTCACCTTGAGAGGCGAGTTAACAATGTTACCCCCACGCCGGTGGCGATGGAGCTCCCGGAGGAGTTTCCTTGTAAAATATGCGGGAAGTAA
Protein Sequence
MAKFLSKVEIDQNVCLHVAVLVAEEQKKNGNGAAEVVKLTVKRARPKATSPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSAGTTPQAANSTSSSNTTVSATTSMSPAQGAAAGDAASPHGASCIQYAPAPTTTATATTTTTTGGKSQLQQLLATEPAKGGAGGNNDGLTKQQLDLIHQIMEQTQRQSQPVSKSPTKTSSKPASKQPTKVQRIWTSTSQQTSSSKTNTNGSSNSNSAKSSNVVSGSPSSASTGSTAASNSTSATASAAAKPELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESSGPPLQTASVSVRALIEEKIISKRTTNSSAVQTTSTATTTTTAATTPTESTAPPLYPLSMHSTGDADAKVTSFVVPAPPAPQPTSAATTTSVPTPAAVIAARRHSDAEFTVPRAPSNTASTAASVQQEAEALADMILKRGGKVSVKRAISDPGRPSQQIQLQFQPGDAFALAGVTYQAEDVGYLSPSLQDDVFHHVPDTMLLQGVDAQQLVQIQASLLQEQDEQLQDIASLEDYATVTAGLQETVVDSATYQARQVVNQELQAVLDSPLPESLAEFSTFHTSNLDMPSPSYQTQSPAQQFTNSPHTSLAAQSPLQSPLIRHDSPGFAYPTPPASHEGQSPSFVQTSLLPMISPQQTTDFVQNVNATRDLEEPPQASSPLSAAFFTSTMSSAAAVEEALEEVLPGESISPDDIYPSLSNSPPPQSPISVAMTPVPSPLSSIPTSTSVSSPRPPVSFTSVTTNVTFPMSPHYTLQSQMMPNSDDPLLSSSPKDFSTRKRFEFGGLQSLKIVGNGYIDFGNPNLAGILVDNNGELKFIQTSGGPIQARNLIVTTNVPSPNTTIREDVKNVPLQRLQKISKTTQCTISKNNIQRPKLHVAVDNVKSEDSDDVFLSPTTIPASPNRLSRKRPRSEPLQLPVVHQSRLRAARGRPPGAAPYTPLPMLNPSRHGPGLYWNAKLKTTLRMFSIPPMVQILIDYFTDNQDDSSISSTCESIPESDSTPHINVGAHYQCTIPPCKVLRDKDDREPTYEHLLWDPGINNYCTDNEVDMYLDFACCAAVPGGGRNKEYALHLLHMCGGNIHEAMLKLMQPTPCLPPDHPLLHYHYSESDQWTISETETFHQAIQKHDKDFFSIAKEVGSKTVKQCIQFYYVWKKVCVDEYRRLRSHREQRGHLHGKSNSNMDFEEKPCLDAKLLGIAETESPMSVTDHRHFSCDYSDCSASFNSRAALTGHIRIHSGTGVRRSPTPTSHLERRVNNVTPTPVAMELPEEFPCKICGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00767655;
90% Identity
iTF_00470361;
80% Identity
iTF_00470361;