Dqua050572.1
Basic Information
- Insect
- Dromius quadrimaculatus
- Gene Symbol
- -
- Assembly
- GCA_963989225.1
- Location
- OZ022333.1:1464063-1465607[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-10 4.7e-07 31.3 0.0 3 42 19 58 17 61 0.87 2 2 4.3 1.6e+04 -2.4 0.1 28 40 454 467 454 470 0.77
Sequence Information
- Coding Sequence
- ATGCCCAATATATATAGACGCAAAGGTACAACACAAAGAGGAGATTGGACAGCAGAATCTTTACTCAACGCAATAGAAGCTGTGGAAAAGGGTACGATGGGCGTTAATGCGGCAGCTAAGGAGTTTGGGATACCAAAAACAACATCAAAACGTAGACTAAAGTTTGGTAACAAAACTAAAACTGATCGTCTTGAGCCATCGTCAAATTTAGGGGATGAAGCGGAGAATAaattggtgaatcatattctcAAGTTACAGCAACATGGATTTGCACCAGATAGAGATAGCGTTAGAACAATGGCCTATGAACTTGCAGAAAAACTGAGAATAAAGCATAGCTTCAACAGCAATAAAGGCAAGGCAGGCTATGAttggttcaaattatttttaaatcgcCATCCTGAGATTTCAATCCGAACAGCTGAAGGAGTTTCGTACTCAAGAGCAACAGGTTTGTGTAAAGAAAACGTAAGGCAGTATTTCACTTTATTGGCTCGTGTGTTGGATGAAAATGATTTGTATGATAAACCGGGGCATATTTTTAATGTCGACGAAACCGGTctacaattgaacaacaaaccGGGAAAGGTACTAGCGGAAAAAGGATCAAAATGCGTCGCAAACATCACCTCGGCGGAAAAAGGAGAAACGATATCGGTGGTCGCCTGCTGCAATGCAGAAGGAATGTTCCTGCCACCATTTTGCATTTTTAAAGGCAAAAATAAAAAGGAAGAATTTTCGAACGGTTCTTATGTCGCCATGTCAGAAAAGTCTGCCTATATTAATGCTGATGTATTTCTTAATTGGTTGGAGACACATTTTCTACCACGAAAACCGAATGGGAAAACCCTGCTGGTCTTAGATGGGCATGCTTCGCACACGAACTCTATAAGTGTATTGGAATTTTCAGAAGAGAATGATATCATTCTTTTGTGCCTACCTGCGCACACGACACATTTTCTCCAACCCTTGGATCGATCCTTCTTTAAAGCATTAAAAACCTTTTATTATTCGGCCTGCAATAGCTTTATGAAAGCAAATCCTGCAAGGAAATTGGGTAGGCTTCAGTTTGGTGAATTGTTGGGATGCTCTTGGAACAAAGCAGCCACGGTACAAAATGGGGTGTCTGGATTTAGAGCCACCGGTATTTTCCCATTTTCTCCAGACATAATTCCAGAGTTCGCCTACATTGCTATGGAAAACATTGTGCAGACTTCCACACTGCAAAGTAGTACTGCCGACTTGTCTTTCACCACTGATGATCCACAACCAAGCTGCTCTCATCATGTTGATGTAGCAAATAATATTTCGCCTACAAAAAATGTTACACCTGGAAAGCTACTAGATGAAATATCACCAGTTCCTACTTCTACTTCTGTACAAAAGGTCAAGAGACGTGGACGTCAGCTTGCTGAAGTTCTCAATACTCCTCAAAACATCGAGGTTGTAAAAAACAGGAAACGTCCCACAGCAAACGCTCCATCAACAAAAGGAAAGGCCAAACGACCATTGAAAAAATCAAGCCTTCGACTCCTCAGATTCTGA
- Protein Sequence
- MPNIYRRKGTTQRGDWTAESLLNAIEAVEKGTMGVNAAAKEFGIPKTTSKRRLKFGNKTKTDRLEPSSNLGDEAENKLVNHILKLQQHGFAPDRDSVRTMAYELAEKLRIKHSFNSNKGKAGYDWFKLFLNRHPEISIRTAEGVSYSRATGLCKENVRQYFTLLARVLDENDLYDKPGHIFNVDETGLQLNNKPGKVLAEKGSKCVANITSAEKGETISVVACCNAEGMFLPPFCIFKGKNKKEEFSNGSYVAMSEKSAYINADVFLNWLETHFLPRKPNGKTLLVLDGHASHTNSISVLEFSEENDIILLCLPAHTTHFLQPLDRSFFKALKTFYYSACNSFMKANPARKLGRLQFGELLGCSWNKAATVQNGVSGFRATGIFPFSPDIIPEFAYIAMENIVQTSTLQSSTADLSFTTDDPQPSCSHHVDVANNISPTKNVTPGKLLDEISPVPTSTSVQKVKRRGRQLAEVLNTPQNIEVVKNRKRPTANAPSTKGKAKRPLKKSSLRLLRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -