Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963989225.1
Location
OZ022324.1:45333676-45339703[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 10 7.1e+04 -3.8 0.0 38 52 47 61 46 64 0.79
2 2 1.1e-24 7.9e-21 76.2 0.0 2 89 156 241 155 241 0.94

Sequence Information

Coding Sequence
ATGAAAATTGAATCACTTTTAGATCACTCCGACGGCTCGACGTACCCCTCAGTGATGGTCCTCTCTTATCCCCGCTACTGTCGTTACCGTGCCCTGATGAAGCGTCTTGAAGGAGTAGAGTCAAAATGGCTACGTCACTCCCTTGTAGTAGCCCTAGGAGGCTTCGCAACGGCTTCTCGCAACACTCGTGTACTTTTCTGCAGGGATACGTTCGATTACCCTGATTTAGAGGGACATGAATTGCTTTGCAATCATTTGGCTCCAAAATTAAAGGGCCGACCAAGAGGAAAACGAAAAAAGAGGAGCATCTCACCAGGAGGAAGCGAAAGCAATGAGAGCGAGGCCAGCATTTGCGTACCTGCCACTTCCAAGaCAAGACTGACAACTGCTGGTGGTCGAAATGGTCTCCGTTGTAACAGCACAACTTCACCAAGACGTAGCACAAGGAGTACGGAAAATGTTGaagaaagagattttctcaacAAACTTCATGCGTTTATGAAATCACATCGAACGCCGATTGGACGAATACCTTCCATTGGTTACAAAGAAATTGATCTTTTCGCATTTTTCACAAAAGTCCAAAAACTCGGAGGATATGACAGTTGCACTGCAAATAGAATGTGGAAACCAGTCTTTGATGAACTAGGCGGCCATCATAATAGTACTAGTGCCGCCACCATCATGCGACGCCATTACGAAAGATTATTGTTATCTTTTGAACGACATATCAAGGGAGAAGAATACAAACCGTTGCCAGTTTCCGAAAGGcgaagattaaaaagtaaaacGTCAAGTTTTAGCGATGCTGAAACAAGTGAAGATCGTTCCAACAGTGGGCATACTACTCCAGTTCCAACGACCTCTATGCCACAGGCAGCTACACCTCCTACTCCTCCTACTCCAACTGAAATTAGAGAATTCGGCGTACCTGAAAAAACGAAATCCGAGGGCAAAACATCTTCTCTCCGCAGTGTCCGAGTCAAACCAGAACGTCTTCGTGACACGTCCCAACAAAAAGACAAACCTCCCATAACTTCAATCAATCCAACCGAAAAGCCTAACTTTTCGTCTAATAGTTTACCAGAAAAGAACTCTTCTAACGTGCCAGTTACTTCCGCCGTAGCTCCAGTTGTAGAAAAAACCCTCCCAGAAAAATCAGCTTCTCCTCTAGAAGGAAAAGAAAACATTCCTGTGATGAATCAAGAAGCCACGGTTAGTCAAACAAGAACAGAAGACGATGACGAGCCGATAGAAATTCCGTACAAGCCAAAATCaccagaaattattgatttagaTCCCGAAACGGAACCTAGCTTATCAATAACACcgagtgataataataatagcatgATTTATGATGTTAAAAAGAGaaaacttgatattttgaaagaagGTGGATTGGAAGTAACTGCTATTCCAAGCTACCCTGAACCTGCTAGCCGGGATGGGCGACCTAGTGTTATACAACATTCGATTCCGAATGTTTCTAAAAGTGATATGGGAAATTTATCGATTACTGTGACGTCAGATACCCGAAGAATGCCTCCCCCAACAATACAACAAGTTCAAAGATCTCAATCTCCTAAAAAAGCATTGCTTCAAAGTCTGTACGGTACAAAAAACTTACCTGGAATTGAAATCCAACGCCGATCTCCTGTAGATGTCCGAATAGTGGGAAATAAATCTCCTGCTAACTTATCTACTCAGACAGCTGCTAAGCCTGTAATAAATGGCACCACCCCTCCAAAAGTAATGCAATCAAGATCTATTTACAGTTATTCAGAACGGGTCGTGTACGGAAATCCTAAAGATCCTTTCATGCCGCCTCCTCATGCTCCTCAAGCTCCTAGGCATTTAATGCGAAGCTCTGTTCGTCCCACTGGAGGCGAAGTCTTAGATTTAACCATCAAGAGCCCCCAAAAACCAGTAGTTGAAATTATGAGGTTGCCAAATGTACCAGTACCTCCTAGAATACCTCCAGCTCATTCTCCGCATCAATTGAAAGATCTTTCCACTAAACCCTTATTGAAAAATCCTTTATTAGATGCTAGAGTAGGTTCTAATCTAGAAATAACTTTAGTTAGCGGAACAAATACTAAACCATTATCTTCAAAGCAACCACTTCCAAAAATATCCCAAATACCAACGAACAATCAGCGATCTCCACAAAAAAGATCTTCTACTGGAAAATTTGTTAACGGCAACTACCCGCCTCAAACACATAATTTACCTCCCCCTAATAAAAATGGCTCACATTTGATCGTACCTTCTCCCTATTCGGGAGGTTCAAATGGTAGAAGCTCAGAtaatattccaaataaaatgGAACCGCCGAAACAGCACCAACATCCCCCTCAAAATCCTGTTGGTAATCAATTCTTGTCAACTAATCATCTTTTTCCGGGATACATCTCGCAATTGGCTGCAGCTGCAGCTTCAAAAAACGCAGCGTTTCTTCCAATGTTAGATCCTTTATACTATTCCGCCCTTTGTTCGCAAGGTTTATATTCCCCAACTGCGCCACCTATGTTTCCCCCTGTACCAACTGTCGATCAGTTACAACTATATAAAGACTTAATGGCACACAGTGCAAGAGGGAGATTTCCATTTCCCATGCCACCGGAAGGAAGCAATCCGAGTATCACCTCTGTTGGGCACAGTTTGGATCATCCTAATTTAATGAAGAAATAA
Protein Sequence
MKIESLLDHSDGSTYPSVMVLSYPRYCRYRALMKRLEGVESKWLRHSLVVALGGFATASRNTRVLFCRDTFDYPDLEGHELLCNHLAPKLKGRPRGKRKKRSISPGGSESNESEASICVPATSKTRLTTAGGRNGLRCNSTTSPRRSTRSTENVEERDFLNKLHAFMKSHRTPIGRIPSIGYKEIDLFAFFTKVQKLGGYDSCTANRMWKPVFDELGGHHNSTSAATIMRRHYERLLLSFERHIKGEEYKPLPVSERRRLKSKTSSFSDAETSEDRSNSGHTTPVPTTSMPQAATPPTPPTPTEIREFGVPEKTKSEGKTSSLRSVRVKPERLRDTSQQKDKPPITSINPTEKPNFSSNSLPEKNSSNVPVTSAVAPVVEKTLPEKSASPLEGKENIPVMNQEATVSQTRTEDDDEPIEIPYKPKSPEIIDLDPETEPSLSITPSDNNNSMIYDVKKRKLDILKEGGLEVTAIPSYPEPASRDGRPSVIQHSIPNVSKSDMGNLSITVTSDTRRMPPPTIQQVQRSQSPKKALLQSLYGTKNLPGIEIQRRSPVDVRIVGNKSPANLSTQTAAKPVINGTTPPKVMQSRSIYSYSERVVYGNPKDPFMPPPHAPQAPRHLMRSSVRPTGGEVLDLTIKSPQKPVVEIMRLPNVPVPPRIPPAHSPHQLKDLSTKPLLKNPLLDARVGSNLEITLVSGTNTKPLSSKQPLPKISQIPTNNQRSPQKRSSTGKFVNGNYPPQTHNLPPPNKNGSHLIVPSPYSGGSNGRSSDNIPNKMEPPKQHQHPPQNPVGNQFLSTNHLFPGYISQLAAAAASKNAAFLPMLDPLYYSALCSQGLYSPTAPPMFPPVPTVDQLQLYKDLMAHSARGRFPFPMPPEGSNPSITSVGHSLDHPNLMKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-