Basic Information

Insect: Drepanosiphum platanoidis
Gene Symbol: ttk
Assembly: GCA_948098885.1
Location: OX402528.1:19686062-19702989[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-08 1.9e-06 27.8 1.7 1 23 290 312 290 312 0.98

2 8 5.7e-05 0.0045 17.2 1.8 1 23 318 340 318 340 0.97

3 8 2.9e-06 0.00023 21.2 0.2 2 23 349 370 349 370 0.97

4 8 2.8e-06 0.00022 21.3 3.2 1 23 376 398 376 398 0.98

5 8 1.3e-06 0.0001 22.4 8.1 1 23 404 426 404 426 0.98

6 8 4.2e-06 0.00034 20.7 0.2 1 23 432 454 432 454 0.97

7 8 7.8e-07 6.3e-05 23.0 5.0 1 23 460 482 460 482 0.97

8 8 1.9e-06 0.00015 21.8 1.0 1 22 488 509 488 509 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-08	1.9e-06	27.8	1.7	1	23	290	312	290	312	0.98
2	8	5.7e-05	0.0045	17.2	1.8	1	23	318	340	318	340	0.97
3	8	2.9e-06	0.00023	21.2	0.2	2	23	349	370	349	370	0.97
4	8	2.8e-06	0.00022	21.3	3.2	1	23	376	398	376	398	0.98
5	8	1.3e-06	0.0001	22.4	8.1	1	23	404	426	404	426	0.98
6	8	4.2e-06	0.00034	20.7	0.2	1	23	432	454	432	454	0.97
7	8	7.8e-07	6.3e-05	23.0	5.0	1	23	460	482	460	482	0.97
8	8	1.9e-06	0.00015	21.8	1.0	1	22	488	509	488	509	0.95

Sequence Information

Coding Sequence: ATGGGAGACGTCGAGTACGTTAATCACGAGGACAGGCTGATGTTCAGCCTACAACAAATGATGAACTCGGAACATTTCGCAGACGTTGTAATATGTTGTGCCGACGGATACAAACTGAGAGCCCACAAAGTCATACTGTCCTATTGCAGTTCGTATTTGCAAACGTTGTTCCTCGGCCATCCCGGACCGGACGACAGCGTGACCATCATCCTGCAGGACGCAGGGCACGAGGACGTGGAGCGCGTGCTGGAGTTCGTGTACACGGGCGCGGCCGTCGTGCCGGCCCACAGGATGGACGGGTTCGTGACCACGGCCGGCGCGCTGGGCATCGGGCCGCTGCTGGACCCGCGGCGGCACCTGGACATGTCCGCGGTCCCGCCGACGCATCCGACGCACCCGCCGCACCCGCCGACCCGGATACCGCGCAGTCCGCCCGCGTACGAGCCGCCGCCGCCGCTGCCGTCCAGGGTCCGACAGCCGCCCAGGACCACGGGCATCCTGACGCCGTCGCCGTGGGCCCAGAACTCGCGGCCGCCGTGCGCGGCTCCGAAATACTCGGCTCCCAGGACCGCGCTGCGCGACGCGGCGGCGGCGGCGACGACAACGTCGACGGTTAAGGTTATGGAAATTGGAAGAGAGCCGCCACCGCCACCGCCGCCGCCACCACCACCGACGACGATGACGAATCAACTGCCGCCGGAAGAACTCGCGATACGAGTAGCCCCGACGCCGCCGCCGCCGCAACCGCCGCCGCTCACGCCGTCTCTGGAAACCGAGAGGGACGCGGACCGGAAGCAAAAAGTTACCAGTGACGCCAACAACAACGGGATCCCGGAGAGAGACCGGAACGCTAGTCAGACGAAAAATCACGTTTGTCAGGAATGCGGGAAAACGTTCGTGACCAAAGCGTCGCTCAAGatccaccagcggacgcacaccggcgagaagccgttcgtgtgcgagtcgtgcggcaaacagttcagccagctgcgcaactacaagtatcaccggtccgtgcacgagggcacgcgcgagttctccggcagctgcccggagtgcggcaagctgttcaacgaccgcgggtacctgagctcgcacatgaagatccaccggaaccgcaaggagtacgagtgcgagcactgcggcaagtgcttcaaccagcgcgtggcgtacaacatgcacgtgcgcatacacacgggcgagcggccgcaccggtgccaccactgcggcaagtcgttcacgcgcaagatgctgctcaagcagcacgtgcgcatacacacgggcgagaagccgttcgcgtgcgcggtgtgcagcaaaccgttcgccgaccggtccaacatgacgttgcacatgcgcctgcactcgggcgtcaagccgtacgcgtgcgcggtgtgcggcaagtcgttcaccaagaagcaccatctcaagacgcacatgaactatcacacgggcgtcaagccgtactcgtgcgacaagtgcggcctgagcttcagccagagcagcaacatgcgcacgcacctgaagaagtgcaacgccgtcgcggccgccgcgccgcccgcgcaaccgccggagccggcgCCGGCTCCGGCGGTCGACTGA
Protein Sequence: MGDVEYVNHEDRLMFSLQQMMNSEHFADVVICCADGYKLRAHKVILSYCSSYLQTLFLGHPGPDDSVTIILQDAGHEDVERVLEFVYTGAAVVPAHRMDGFVTTAGALGIGPLLDPRRHLDMSAVPPTHPTHPPHPPTRIPRSPPAYEPPPPLPSRVRQPPRTTGILTPSPWAQNSRPPCAAPKYSAPRTALRDAAAAATTTSTVKVMEIGREPPPPPPPPPPPTTMTNQLPPEELAIRVAPTPPPPQPPPLTPSLETERDADRKQKVTSDANNNGIPERDRNASQTKNHVCQECGKTFVTKASLKIHQRTHTGEKPFVCESCGKQFSQLRNYKYHRSVHEGTREFSGSCPECGKLFNDRGYLSSHMKIHRNRKEYECEHCGKCFNQRVAYNMHVRIHTGERPHRCHHCGKSFTRKMLLKQHVRIHTGEKPFACAVCSKPFADRSNMTLHMRLHSGVKPYACAVCGKSFTKKHHLKTHMNYHTGVKPYSCDKCGLSFSQSSNMRTHLKKCNAVAAAAPPAQPPEPAPAPAVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00469070;
90% Identity: iTF_00469070;
80% Identity: iTF_00469070;