Basic Information

Insect: Drepanosiphum platanoidis
Gene Symbol: su(Hw)
Assembly: GCA_948098885.1
Location: OX402528.1:15329736-15333391[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 4.6e-05 0.0037 17.5 1.3 1 23 94 116 94 116 0.95

2 13 0.0001 0.0081 16.4 0.6 1 23 154 177 154 177 0.97

3 13 0.0033 0.27 11.6 2.1 2 23 184 205 183 205 0.95

4 13 2.3e-05 0.0018 18.4 1.5 1 19 212 230 212 233 0.95

5 13 2.4e-08 1.9e-06 27.8 0.3 1 23 244 266 244 266 0.97

6 13 7.2e-06 0.00057 20.0 0.4 1 23 276 298 276 298 0.98

7 13 1.4e-06 0.00011 22.2 0.5 1 23 304 326 304 326 0.99

8 13 9.5e-05 0.0076 16.5 0.8 1 23 332 354 332 354 0.99

9 13 5.8e-05 0.0046 17.1 3.6 1 23 360 382 360 382 0.95

10 13 4.4e-07 3.5e-05 23.8 1.6 1 23 388 411 388 411 0.97

11 13 0.019 1.5 9.2 0.8 1 23 417 439 417 439 0.97

12 13 2e-06 0.00016 21.7 0.7 1 23 445 467 445 467 0.96

13 13 1e-06 8.1e-05 22.7 1.3 3 23 475 496 474 496 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	4.6e-05	0.0037	17.5	1.3	1	23	94	116	94	116	0.95
2	13	0.0001	0.0081	16.4	0.6	1	23	154	177	154	177	0.97
3	13	0.0033	0.27	11.6	2.1	2	23	184	205	183	205	0.95
4	13	2.3e-05	0.0018	18.4	1.5	1	19	212	230	212	233	0.95
5	13	2.4e-08	1.9e-06	27.8	0.3	1	23	244	266	244	266	0.97
6	13	7.2e-06	0.00057	20.0	0.4	1	23	276	298	276	298	0.98
7	13	1.4e-06	0.00011	22.2	0.5	1	23	304	326	304	326	0.99
8	13	9.5e-05	0.0076	16.5	0.8	1	23	332	354	332	354	0.99
9	13	5.8e-05	0.0046	17.1	3.6	1	23	360	382	360	382	0.95
10	13	4.4e-07	3.5e-05	23.8	1.6	1	23	388	411	388	411	0.97
11	13	0.019	1.5	9.2	0.8	1	23	417	439	417	439	0.97
12	13	2e-06	0.00016	21.7	0.7	1	23	445	467	445	467	0.96
13	13	1e-06	8.1e-05	22.7	1.3	3	23	475	496	474	496	0.97

Sequence Information

Coding Sequence: ATGGAAACTCCAAGAAAACGTGGTCGCCCAAAGAAGGTAATCAAAGTGGAACAACACAGTCCACGACCTGAAGATTTAGAAGAAATACTACAAGAAATAAACGATGAACCTATTGATGATTATGATTACTTTCCAAATGGATTGGACTACATAGTTATCAAAAACAAGAAAAATATCAACAATAATGAAGATGTTTATGACTTTGATGTTGAAAAAGAAGATGGACCTGGCATAAAAAATATAAAATCGGAACAAAAATCTGAATCTGAAGTATTAGAACATGCTTGTGATATATGTCCAAGAACATTCAAAACCTTGCCTGGTTTAAAAAGACATAAAACATCACATGACCGAAAACCGCTGGAAAACATTGGTAATGATGACGACTCATTAAAGAAAGAAATGAACAGCTGTGATTGTTGTGGTGAAGATTTAGCTACTGCCCACACGAATGGGGATTTTGAATGCTTCGACTGTGGAAACTTTTTTAAATTAAAAGCTAACATGGAACGCCATCAGTTAATGGTACATTGTTATGATGATGTTCTGAATTGTCCGACTTGCGATTTTAATTGTACCGACAAAGAAACTTTATCCCAACATTTGTATTCTCACTCAGGAACATTGAAACCCTATTCATGTCCTGTTTGTTTTACATCATTTAGTAGGAAGTATCATCTTGTACGTCATAATATGCAAACTGGTTGTGATGGTTCAGAAAAACCAAAATTTCCATGCCAGGTCTGTGGAAAAGTTTTTAACCGCAAAGATAATTTAAGAGAACATTTGCGTGCCCATGCCGGTCAAACTAAAAAAAAGCGTACCTATAATTGTGAATACTGTAATAAAGAGTTTGTTGGTTCGGCATTATTGACTGTTCATAGAAGAAGTCATTTAGGTTACAGACCATATCAGTGTGATTTATGCCCAAAGCGTTTTCCATCCAGTGGAGCCATGAAAAAACATCGTAGAATTCACACAGGCGAACGTCCATATGAATGTCAACAGTGTTTTGCGAAATTTGCGGCAAAAGAAACTTTAAACCGTCATATCAAAACACATACTGCACTTAAACCACACTCATGTGAATTTTGCGGAAAGACTTTTATACAGATTTCTCAATTGCGAGCCCATTTATTCCATCATACAGGCGAAAATGGTTTTACTTGTGAAACATGTGGTAAATCTTTCAATCGTCGTTCACGTTTAACACTCCATATTAGATATGTGCATGAAGGAGCTGAGCCATTTATGTGTACTGTATGCAATAAGGCTTTGCTGCGAAAAGAAGATGTACAGCGACATCATATTGTTCATTCTGGTGTAAAGGCACATGCATGTCCTATTTGTGAAAAACGATTTGCAATGAAGTCGTCTTTGAAAATTCACTTATTGACACATACTAAAGAACCACCACGTGCATGTGATGAATGTGGCCGTGCATTTATCCGTCAGGATTGTCTGTTACGTCACATGCGCTCTAAACATAGAGACATGTTAGCTGAAATCATGGCTGATGCAGAAAAGAAAAAACTGGAAGCTCAATTATTGGGAATGGTAAAGAAAGATGTTGATCAGAATGATGAGGACGAGAATGAAAATATTGAGGATTTAGACAAAGACAATGATGACGATGAAAAAAGTATTGATGAACTGGAAGATAATGATAGTACCACAAGTGAAGAATCTAATCAAAATAACCCACTGGCTGATTCATTAATGGAATTATTGACTGTACTAGTTGATGAAAGCACACTTAAAGAGTTCGGTTGGCCAAATATGAGTGTTGATCATCTGATTGAATCTGTGATAAAGAGGTGTGGACATACACCTGTAGCCTCTGGGGATACTTCATACACAACGAGACTTAAAGAGAACTCTAAGCAATTGTTTTCAATTATTATTGATGATTCTGCGATTCAAACGCTTCTCAAGAATCAAACGATTGAAGAAGTAATTGAACATGTGTTAAAGTTGGCTAAAGCATAG
Protein Sequence: METPRKRGRPKKVIKVEQHSPRPEDLEEILQEINDEPIDDYDYFPNGLDYIVIKNKKNINNNEDVYDFDVEKEDGPGIKNIKSEQKSESEVLEHACDICPRTFKTLPGLKRHKTSHDRKPLENIGNDDDSLKKEMNSCDCCGEDLATAHTNGDFECFDCGNFFKLKANMERHQLMVHCYDDVLNCPTCDFNCTDKETLSQHLYSHSGTLKPYSCPVCFTSFSRKYHLVRHNMQTGCDGSEKPKFPCQVCGKVFNRKDNLREHLRAHAGQTKKKRTYNCEYCNKEFVGSALLTVHRRSHLGYRPYQCDLCPKRFPSSGAMKKHRRIHTGERPYECQQCFAKFAAKETLNRHIKTHTALKPHSCEFCGKTFIQISQLRAHLFHHTGENGFTCETCGKSFNRRSRLTLHIRYVHEGAEPFMCTVCNKALLRKEDVQRHHIVHSGVKAHACPICEKRFAMKSSLKIHLLTHTKEPPRACDECGRAFIRQDCLLRHMRSKHRDMLAEIMADAEKKKLEAQLLGMVKKDVDQNDEDENENIEDLDKDNDDDEKSIDELEDNDSTTSEESNQNNPLADSLMELLTVLVDESTLKEFGWPNMSVDHLIESVIKRCGHTPVASGDTSYTTRLKENSKQLFSIIIDDSAIQTLLKNQTIEEVIEHVLKLAKA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01167898;
90% Identity: iTF_01346613;
80% Identity: -