Basic Information

Gene Symbol
stc
Assembly
GCA_945859695.1
Location
CAMAOO010000060.1:2213412-2228148[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 2 2e+04 -4.4 1.6 15 19 584 588 583 588 0.81
2 13 0.043 4.2e+02 1.2 1.2 2 10 616 624 616 624 0.93
3 13 7.9e-06 0.078 13.1 16.2 4 19 632 647 630 647 0.93
4 13 1e-07 0.00099 19.2 12.2 1 18 683 700 683 701 0.98
5 13 3.3e-05 0.32 11.2 15.2 1 18 742 759 742 760 0.98
6 13 1.9e-05 0.18 12.0 12.0 1 19 801 823 801 823 0.87
7 13 2 2e+04 -5.4 2.2 6 10 853 857 853 857 0.94
8 13 0.038 3.7e+02 1.4 10.1 1 11 863 873 863 874 0.95
9 13 0.019 1.8e+02 2.4 0.7 3 10 877 884 876 884 0.92
10 13 5.2e-07 0.0051 16.9 12.2 3 19 892 908 890 908 0.92
11 13 0.00043 4.2 7.6 8.9 9 18 954 963 952 964 0.92
12 13 9.8e-08 0.00096 19.2 15.8 1 16 1000 1015 1000 1023 0.90
13 13 0.066 6.5e+02 0.6 14.1 1 16 1030 1047 1030 1053 0.77

Sequence Information

Coding Sequence
ATGTCTCAGTGGAATAATTCTTACGCGTACAACCAATATCAGAGTGGTAATGGGTGGGGTGGTGATGGTAATGGTCAATTTGTGAATCAAGCCCAGTTTCCTGGAAGTCAGGACCCAAATGCCCAGTATGTTAGCTTTAATGAGTTTATCACCCAAATGCAGGGCACCAGTGCTATGCCAGCCAACACACCAAACTATAACCCTATTCAGTATGAGACCTACCCTACCCCGCAATATAACTACCCAAACACTCCATCTACCTCCCAAAACCACAGCTACAATTATGGTGCATCATCTAGTATTCCTAATGGTGTAGAATATCAAATCCAGAATCAGTACAGTAATGTACCAATTGCAAATTCTTATGCAAATGAAATTATTCTAAATTCAAATTTAACACCCACTGCTGTAGAATTTGTGCCAAAAAATGCTTCTGTGAAAGTATCCAGTAGTAACCAAGATATTGCAGAGTCATCTAAAGGTAATGATAGTGCAAAAGAACCCAGATCAAATTACACAAATTCATCAGAAACTAACTGGAGAGAGAGGCCACAAAGCACAAATCAAAATGGTACTACGAGCTACAAAAATGAAATTAATGGCCGCTCTCAAGACAACTACAGAGCACAAGAGACAAGAGACGAAGACGTAAGGAAACAAGAAAACCGACGTAAGAGAGAAGATAACTTCAGAAACCCAGATAGCTCTCGTAATAGAGAAAGTAACTATAGGAACCCTGAAAGCAGTTATAATAAAGAAGATGGCTATAGGAACACAGACACTAGTTCTAGCAAAGAAGATAACTATAAGACTCAAGAAAGCAGTAATAATGGGGAAAACAATTATAAAAATCTAGACAGTGGTCATTCCAGAGTAGAAAATTCTAGAAACCCAGATAGCTCTAATTCCAGGGGTGATAACTACAGAAATGCCGACCACAGTCGTTCCAGAGATGGTAATTATAAAAATCAAGACAGTGGTAGTTCCAGAGACAGTAACTTCAGAAACCCTGACAGTGGTCGTTCCAGAGATAGTAACTATAGGAATCTTGACAGCAGTCGTAGCAGAGACGATAACTACAGAAACCCTGAAAGTAGTAATTACAGGGATGATAGCTATAGAAACCCTGGCAGCAGCCGTAATAGAGATGATAATAGCAGGAACTCTGACAATAGTCGTCGTGATAATAGTTGGTATGAGTCAAATAATCGCAATTCTGATACTCAAGACAGTGGCAGCCGTTACGAAAACAGAAATGAGAAAAGGAAAAACAATTCCAAAGGCAAAAATAAAGATTCTGAGCGCACATTCTACAATAGTGCAATAAGCAAAGATAGCCAAGACGTGAGGAATGGAAAAGGGGAAGGTGGTAGGAGCAAGAGCTGGATAGGTAGTCAAAGATTGAGAACTGTTGACCGCAATGTGGTTGATGATGAGCAGTACGCTAACACATATCTTCAACCGAGAGAGGAACGAGGAGAAAGAGCAGAATGGGCTCCTAAATCAAAAGCAACAATGAGTCCAGTGAAATATAAAAACAAACAAACTACAGATCAAGCTAGCACAGAAATGACTCAACGCGAGCGTCTTACTGAGCAGCTGGATAAGGGCACCTTGGAGTGTCTTGTGTGCTGTGAGCGCGTGAAGCAGACGGACCCCGTGTGGTCCTGCAGCAACTGCTACCATGTGCTTCACCTCAGATGCATCAGGAAGTGGGCAGTCAGCAGTATGGTCGAGGGCAAATGGCGGTGTCCAGCATGTCAGAACACGAACGAGGACATCCCGACGGAGTATAGGTGCATGTGTGGCGCGGTGCGGTCCCCGGAGTACCAGCGCGGCGCCAGCGGCGCTCACACCTGCGGCCGCGCCTGCCGCCGCGCGCGCGCCTGCGTGCACCCCTGCACCCTGCTCTGCCACCCCGGGCCTTGCCCGCCCTGCCAGGCCACTATCACTAAGCAATGTGGATGCGGCGCGGAGACTCGGTCGGTACTTTGCAGCAGCAAGTTGGCCCAGGTTTGCGGCCGAGTGTGCGGGCGAATGCTCGAGTGCGGCGTGCACGCCTGCACCAAGGAGTGCCACGAGGGACCCTGCGACACTTGCGCAGAGGTGGTTGCGCAAGTGTGCTACTGCCCCGCGGAGAGATCCCGCTCGGTGGCGTGCACGCGCGCGGTGGGCGGGCGCGCGGCCTGGGCGTGCGGCGCGGAGTGCGCGCGCGTGGCGGCGTGCGGCGCGCACGTGTGCCGCGCGCCCTGCCACCCGCCGCCCTGCCCGCCCTGCGCGCGCGCCGTGCTGGCCGTGCTCACCTGCCCCTGCGGGAAGACCAAGTTGCAAAAAGATCAGCGCAAAAAATGCACGGACCCTATACCCCTATGCGGGAATATTTGCGCCAAGGCCCTGCCCTGCGGCCCGGACGGCGACAAACACTTCTGCAAGTTGGACTGCCACGAAGGCCCCTGTCCTGTGTGCCCAGACAAAACCCTCCTGCAGTGCCGCTGCGGCCACTCCAGCCGCGAAGTCCCCTGCGCTGACTTGCCCCAGATGTACAACAACGTTCTGTGCCAAAAGAAGTGCAATAAGAAGCTGTCGTGCGGCCGCCACCACTGCCGCTCGGTGTGTTGCGCGGCGTCGTCCCACCGCTGCACCGCAGTGTGCGGCCGCACCCTCGGCTGCCAGACACACCGCTGCGAGGAGTTCTGTCACACCGGCCGCTGTGCGCCCTGCCCGCGCGTCAGCTTCTCGGAGCTGCGCTGCGAGTGCGGGCTGGAGGTGGTGTGGCCGCCCGTGCGCTGCGGCACGCGGCCGCCCGCCTGCAGTGCGCCGTGCCGCCGCCCGCGCGCCTGCGCACACGCGCCTCACCACGCCTGCCACGCCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCCTGCACGAGGAACGCAAGACGATACCATGTTCGCAAGAAGAGTTCTCATGCGGGCTACCTTGCGGGAAGCCTCTGCCTTGCGGCAAGCACACGTGCACCAAAGTATGCCACAAGGGGCCATGCGACACTGGCAAGTGCACCCAGGCGTGCGGCGAGAAGCGGCCCAGCTGCGGGCACCCGTGCGGCGCGCCGTGCCACTCGGCGGCGGGCGGGCCGTGCCCGGGCGCGCAGGCCTGCCGCCGCCCCGTGCGCGCCACCTGCCCCTGCGGCCGCCGCGCCGCCGACCGCGCCTGCTGCGACAACGCCCGCGACCGCGCCAAGATTATGAGTTCTCTGGTGGCGTCGAAGATGCAAGAGGGTGGATCAGTTGATTTGTCTGATGTGCAGCGGCCCGGATCTATGCTCAAGACGCTGGAGTGTGACGACGAGTGCGTAGTGTTGGCGCGCACGCGGCGGCTGGCGCTGGCGTTGCAGATCCGCAACCCGGACGTGGGCGCCAAGCTCGCGCCGCGCTACAGCGAGGCCGTGCGCTCCACCGCCGCCCGCGAGCCGAGCTTCGCCAACCACGTGCACGACAAGCTCACCGAGCTCGTGCACTTGGCTAAAAAGTCGAAGCAAAAGACCCGATCCCACTCGTTCCCCTCGATGAACCGTCAGAAGCGTCAGTTCATCCACGAAATGTGCGAACACTTTGGCTGTGAGAGCGTCGCCTACGACGCCGAACCGAACAGGAACGTCGTCGCTACTGCAGACAAGGAGAAGTCGTGGCTGCCGGCCATGAGCGTGCTGGAGGTGTTGGGTCGCGAGGCGGGCCAGCGCCGCGTGCCCGGGCCCGTATTGCGCGCGCCCGCGCCCGCAGTCACCAGTTCCACCACTTCCACCACCTCCACCAGATCCCCGGGAGGCTGGGCCACGCTGACGTCCACCAACGCGTGGGCGGCGCGCAGCCAGCAACGGCCCGCACCTGCGCCTGCGCAGCCCGAGCCCAAAATAGACTACTTCGACAACCCGCCAGATAATTAG
Protein Sequence
MSQWNNSYAYNQYQSGNGWGGDGNGQFVNQAQFPGSQDPNAQYVSFNEFITQMQGTSAMPANTPNYNPIQYETYPTPQYNYPNTPSTSQNHSYNYGASSSIPNGVEYQIQNQYSNVPIANSYANEIILNSNLTPTAVEFVPKNASVKVSSSNQDIAESSKGNDSAKEPRSNYTNSSETNWRERPQSTNQNGTTSYKNEINGRSQDNYRAQETRDEDVRKQENRRKREDNFRNPDSSRNRESNYRNPESSYNKEDGYRNTDTSSSKEDNYKTQESSNNGENNYKNLDSGHSRVENSRNPDSSNSRGDNYRNADHSRSRDGNYKNQDSGSSRDSNFRNPDSGRSRDSNYRNLDSSRSRDDNYRNPESSNYRDDSYRNPGSSRNRDDNSRNSDNSRRDNSWYESNNRNSDTQDSGSRYENRNEKRKNNSKGKNKDSERTFYNSAISKDSQDVRNGKGEGGRSKSWIGSQRLRTVDRNVVDDEQYANTYLQPREERGERAEWAPKSKATMSPVKYKNKQTTDQASTEMTQRERLTEQLDKGTLECLVCCERVKQTDPVWSCSNCYHVLHLRCIRKWAVSSMVEGKWRCPACQNTNEDIPTEYRCMCGAVRSPEYQRGASGAHTCGRACRRARACVHPCTLLCHPGPCPPCQATITKQCGCGAETRSVLCSSKLAQVCGRVCGRMLECGVHACTKECHEGPCDTCAEVVAQVCYCPAERSRSVACTRAVGGRAAWACGAECARVAACGAHVCRAPCHPPPCPPCARAVLAVLTCPCGKTKLQKDQRKKCTDPIPLCGNICAKALPCGPDGDKHFCKLDCHEGPCPVCPDKTLLQCRCGHSSREVPCADLPQMYNNVLCQKKCNKKLSCGRHHCRSVCCAASSHRCTAVCGRTLGCQTHRCEEFCHTGRCAPCPRVSFSELRCECGLEVVWPPVRCGTRPPACSAPCRRPRACAHAPHHACHAGDCPPCVVLTTKRCHGLHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCTKVCHKGPCDTGKCTQACGEKRPSCGHPCGAPCHSAAGGPCPGAQACRRPVRATCPCGRRAADRACCDNARDRAKIMSSLVASKMQEGGSVDLSDVQRPGSMLKTLECDDECVVLARTRRLALALQIRNPDVGAKLAPRYSEAVRSTAAREPSFANHVHDKLTELVHLAKKSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLGREAGQRRVPGPVLRAPAPAVTSSTTSTTSTRSPGGWATLTSTNAWAARSQQRPAPAPAQPEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-