Basic Information

Gene Symbol
pnr
Assembly
GCA_945859695.1
Location
CAMAOO010000038.1:2094702-2104376[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9 2e+04 -5.0 1.2 23 26 143 146 142 147 0.77
2 3 8.6e-18 1.9e-14 53.1 4.1 1 35 223 256 223 257 0.97
3 3 3.8e-18 8.3e-15 54.2 6.0 1 34 277 309 277 311 0.98

Sequence Information

Coding Sequence
ATGTTCGGCGGCGGCGGCGGCGCGGGCGGCGGCTACGGCGGCGGCGACGGCGCCGACACCTACGGCCTGGGCTACGTGGCCGGCCCGCGCCTGCAGCAGTACGCGCCCTTCGCGCCGCACCAGAACGTGTGGCACCACCACGCCGCGCACCACGACTCCTACGGTACGCACGCGCTCCCCACTACCCACTCCCCACTCCCCACTCACCACTCCCCAGCCTCATCGCCTAAAACACATTTAAACGGCGATAAGCCCGCGCTGTTCGCGGCCGGCCAGCCGCGGTCAGTGCGCGCCGTGACCTCTGACCGGGCGAGTCGCTCCCACTGTGCCACTGGCTGCGAAATGGATACAATGTCGCTACCCCCCAACTGGCTGAGGAGCATGGCGCTGCTGGCAGGTGCGGCTCGCGGCCGCCGCGGATACGGTTGTGCCGCGTGTAGTGCAGCGAGTGCAGTGTGCAAGTGTACGACGCGCGCCCTGTTGCCCGCAGGTGGCGGCGGCGTGGGCGGCGTGAGCGGCGTGGGCGGCGTGGGCGGCGTGGGCTCGGTGGGCGGCGGCCTGTACGGGCAGAACGTGGTCATGGGCTCGTGGTGCGCGCCCTACGATGCGCTGCAGCGCCCGCCCGCCTATGATGGCGTGCTGGAGGTGTACGAGGAGGGGCGCGAGTGCGTCAACTGCGGCGCCAACAACACGCCGCTGTGGCGCCGCGACTCCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACCACAAGATCAACGGCGTCAACCGGCCGCTCGTGAAGCCGAGCAAACGGCTGTCGGCGGCGCGTCGCCACGGCCAGTGCTGCACCAACTGCGGCTCGCGCAACACCACGCTGTGGCGCCGCAACAACGACGGCGAGCCCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACGGCATCAACCGCCCCCTGGCCATGAGGAAGGATGGCATCCAGACAAGGAAACGAAAACCGAAGAAAGCAGGCAATGGCTCAAAACCATCACAAGATGCAACTAAGAAGGACGGACACAGCTCTCCCGGAGTCGATGGTACCTAA
Protein Sequence
MFGGGGGAGGGYGGGDGADTYGLGYVAGPRLQQYAPFAPHQNVWHHHAAHHDSYGTHALPTTHSPLPTHHSPASSPKTHLNGDKPALFAAGQPRSVRAVTSDRASRSHCATGCEMDTMSLPPNWLRSMALLAGAARGRRGYGCAACSAASAVCKCTTRALLPAGGGGVGGVSGVGGVGGVGSVGGGLYGQNVVMGSWCAPYDALQRPPAYDGVLEVYEEGRECVNCGANNTPLWRRDSTGHYLCNACGLYHKINGVNRPLVKPSKRLSAARRHGQCCTNCGSRNTTLWRRNNDGEPVCNACGLYYKLHGINRPLAMRKDGIQTRKRKPKKAGNGSKPSQDATKKDGHSSPGVDGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-