Basic Information

Insect: Drepana falcataria
Gene Symbol: ush
Assembly: GCA_945859695.1
Location: CAMAOO010000077.1:1304380-1308920[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.01 0.62 10.8 0.2 1 20 142 161 142 163 0.93

2 9 8.6e-05 0.0053 17.3 0.9 1 23 199 221 199 221 0.98

3 9 0.078 4.8 8.0 0.6 3 20 253 270 252 272 0.92

4 9 0.019 1.2 9.9 3.9 2 21 510 529 509 530 0.95

5 9 0.013 0.83 10.4 0.2 3 20 559 576 557 578 0.90

6 9 4.1 2.5e+02 2.5 0.0 2 23 606 627 605 627 0.93

7 9 0.0084 0.52 11.0 1.3 1 23 633 655 633 655 0.99

8 9 0.44 27 5.6 0.7 1 23 694 717 694 717 0.95

9 9 0.18 11 6.8 0.7 2 20 749 767 749 769 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.01	0.62	10.8	0.2	1	20	142	161	142	163	0.93
2	9	8.6e-05	0.0053	17.3	0.9	1	23	199	221	199	221	0.98
3	9	0.078	4.8	8.0	0.6	3	20	253	270	252	272	0.92
4	9	0.019	1.2	9.9	3.9	2	21	510	529	509	530	0.95
5	9	0.013	0.83	10.4	0.2	3	20	559	576	557	578	0.90
6	9	4.1	2.5e+02	2.5	0.0	2	23	606	627	605	627	0.93
7	9	0.0084	0.52	11.0	1.3	1	23	633	655	633	655	0.99
8	9	0.44	27	5.6	0.7	1	23	694	717	694	717	0.95
9	9	0.18	11	6.8	0.7	2	20	749	767	749	769	0.92

Sequence Information

Coding Sequence: ATGAAGTTGAGCCTCTCATTAATTGGCGTTTTGAGTCGAGATCGTTGCGCGAAAGATAGGTTAATTCCTCGCTCGAGAGAGATCGTTGTCTCGCTCCAAAAGGAAGGTGAGGACGAGGAATGGGGAAACGAGAGCGAGGCGATGCCAAGAGAACCTCGCACGCCGAGCTCCGGGGGCGACCGCGCATCGAGCGGGGGCGCGTCCCCCGCCGCGTCCGGGGGCTCCCCCGCTGCGTCGCCACCGCGCCTGCGCCTCAACACCAGCCTGGCCACTGACCCTGCGCTCGCGCCGCAAGCTACGCCACTCAAGCGCGAACCCCCTTCGCCCTCCCCGCCCCCGCCGCCCGCAGGCGCAACCCCCCGAGACTACCTAGCCTTCACCGCCGCCTTCCCGGGCCTCTTCCCCGCCGCTGCCCCCCCTGGCTACATGTGCCAGCCTTGCGGCATTCGATACTCCTCCCTCAGCACGCTCCAGGCGCATCAGGAACATTACTGCTCTAACAGGAAGCCCAAGGAGGGAGCAGACACACCCGTAGATGGCGCCGCCGATGATTCGAGCAGCGACGCCAAAACGCCGCGCCCGCCAGGGAAACAGTACGCCTGCACCTACTGCTCGTACAGTGCTGATAAGAAGGTCAGCCTGAACAGACACATGAGGATGCACTCTTCGTCGCCAGTGAGTAGTGGCACTCCAGCCCCAACGCCTGCGTCTAACGGGGAAGCTGCTGAGAGCCCACCGGTCCCGCAAGACCGTTACTGTGCCGATTGTGATATACGCTTCAGTTCCATCAAAACCTACCGAGCGCATAAGACACACTACTGCAGCACTCGACAAGTGGTGAAGCAAGCTCTGAGTGCCGTCAGAGGGGCGTCAGTGACGTCAGGGTCGGCGCCTCCGTCACCGGGGGCCACGCCGCCGGCGCAGAACCAATACGCGCTAGCTTTGCCCACGAACCCCATCCTAATCGTGCCCTACTCGTTACTGAGAAGCGCGAGCACGCTGCCTGGGACGACTCTACCTGATCCAGATACCCCGTGCTTTTTGTTGCCGAATGGGACCTTCCAGCCCTTGAGTCGGGCGTTGCCAAATATTAACACTGAAGCAAAAGAAGCAGACGTTTTGAAGTCAGCCAATCGGCCGCGGGAGCCGGCGCGGGATGGGACAACACCACTCGACTTGAGCGTCCGTCGGTCACCCGAGTCCATAACGATTGACGATCACGAAAAGGAGAATAGAATACGATCGGCGACCCCAGAGCAGATAGTGTGTGCGCCGTCGCTACCGGGATCCCCGGTGTCGCCGACGCCGTCTCGGCGCTCGTCGTCTCCGTGCGGAGAGACTTCACCTAAGCGCCGACGACGCAACTCCAGAGGGCCAACGCCAAAACCACCAAGCGTGCCCTCACCGCCCGAAGAGAAATTCGCCCCGTTACCTGCGATCTTACCGCCAACTTTAGCGTTACGCCTAGCGTCGGAGCTGCCCGTGACCGTGGCTTCACCTCAAGTGCTGGTGAAACAAGGAGTGTCCAAATGTAAGGAATGCAATATAGTATTCTGCAAGTACGAGAACTACCGCATCCATAAGAGGCATTACTGCTCGGCGGGGGGAGGCGAGGAGCGGGCGAGCCCTGCGCCGCCGGAGCCGGGCCCGCCGCCGCAATATCGTCAGCTGATCTGCCTGGCGTGCGGGATCCACTTCAGCTCGATGGACAATCTGACGACGCACCAGTCGTACTACTGCACTAAGCGGGACTCGCGGTCCCCCCGCAGTGTGCCCGAGGCGCCGCGGCCCGCGCCGGGCTCGGAGGGCGGCTGGAAGTGTCCCTGCTGCGAGGTGGTGTCCCCCACGGCGGCGGCGGCGCAGCGCCACATGGAGGCGCACGCGGGCGTGAAGGCCTTCCGCTGCACCATCTGCCGGTACCGCGGCAACACGCTGCGGGGCATGCGCACGCACATACGGATGCACTTCAACAACAAGAAGCCCGCTGATTTGCAGGAGGAGACATACATAGCGTGTGTGCTGGAAGAGGACAGCCGCGAGACCACGTCTCCAAGCCCGGCGGTGGCGGGCGAACGCGTGCACCGCTGCGGCAGCTGCGCTTACACCTCCACATACAGAGGCAACGTGGTGCGCCACGCCCGGCTCGTCCACGCCACCGACGAGCCAGAAGAGGAGCAGACATCACCCACGCAATCTCTCGACATCAAAAAGGAGCCAGACGCGGAGCCGGAGGAAACACCCAATTACTGCAAATCCTGCGACATTTCCTTCAAGTACGTCAACACATACAAAGCTCACAAGCAGTTCTACTGCATCGCGAATAATCAAGATGCCGCTACCAACAACAACGTGCCGGCGCCGCCCAGGGTCAACGACACTCCTGTTCTATGA
Protein Sequence: MKLSLSLIGVLSRDRCAKDRLIPRSREIVVSLQKEGEDEEWGNESEAMPREPRTPSSGGDRASSGGASPAASGGSPAASPPRLRLNTSLATDPALAPQATPLKREPPSPSPPPPPAGATPRDYLAFTAAFPGLFPAAAPPGYMCQPCGIRYSSLSTLQAHQEHYCSNRKPKEGADTPVDGAADDSSSDAKTPRPPGKQYACTYCSYSADKKVSLNRHMRMHSSSPVSSGTPAPTPASNGEAAESPPVPQDRYCADCDIRFSSIKTYRAHKTHYCSTRQVVKQALSAVRGASVTSGSAPPSPGATPPAQNQYALALPTNPILIVPYSLLRSASTLPGTTLPDPDTPCFLLPNGTFQPLSRALPNINTEAKEADVLKSANRPREPARDGTTPLDLSVRRSPESITIDDHEKENRIRSATPEQIVCAPSLPGSPVSPTPSRRSSSPCGETSPKRRRRNSRGPTPKPPSVPSPPEEKFAPLPAILPPTLALRLASELPVTVASPQVLVKQGVSKCKECNIVFCKYENYRIHKRHYCSAGGGEERASPAPPEPGPPPQYRQLICLACGIHFSSMDNLTTHQSYYCTKRDSRSPRSVPEAPRPAPGSEGGWKCPCCEVVSPTAAAAQRHMEAHAGVKAFRCTICRYRGNTLRGMRTHIRMHFNNKKPADLQEETYIACVLEEDSRETTSPSPAVAGERVHRCGSCAYTSTYRGNVVRHARLVHATDEPEEEQTSPTQSLDIKKEPDAEPEETPNYCKSCDISFKYVNTYKAHKQFYCIANNQDAATNNNVPAPPRVNDTPVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00050390;
90% Identity: iTF_00467797;
80% Identity: -