Dfal004235.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000015.1:10841410-10851450[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.26 16 6.3 2.9 2 19 501 518 500 524 0.93 2 12 0.0024 0.15 12.7 2.2 1 23 538 561 538 561 0.96 3 12 0.0071 0.44 11.2 0.6 1 23 566 590 566 590 0.90 4 12 2 1.2e+02 3.5 0.1 2 23 611 635 610 635 0.89 5 12 0.014 0.89 10.3 0.1 2 21 641 660 640 661 0.95 6 12 7.3e-06 0.00045 20.6 3.0 1 23 719 740 719 740 0.98 7 12 0.00037 0.023 15.3 2.1 1 23 746 769 746 769 0.95 8 12 0.015 0.9 10.3 0.1 2 20 795 813 794 815 0.93 9 12 0.45 28 5.6 1.8 3 23 825 847 824 847 0.88 10 12 0.14 8.8 7.1 5.0 1 20 854 873 854 876 0.94 11 12 0.00035 0.021 15.4 2.0 1 21 882 902 882 907 0.92 12 12 2.8 1.7e+02 3.1 3.0 1 23 913 936 913 936 0.96
Sequence Information
- Coding Sequence
- ATGCTGTCACCGCGAGAGGATGACGACGACGACACTCACCTGTGCATCAAGTGCAACGCTACTGTCACCGGGCTAGATAACTACGTGCAGCATAGGAAGCAACGATGCGGGAAACTTAGTAAATCAGATCCTGCCAAACCTGATTTACCACCGATAGACACATTAGAACCATCGTATAGTCTCGGTGCCGACGTTTTCTTTCAATCTTTAGAACTACAGAGCAGTGTAAAAAAAACTTCTCTGTCGCGATTGACACCACCCATTACAAAAGCCAATATAGATATGAAAGGTCCTTTGGCCGTCGCGTCGACTTCTAAAGATACGCCAAGAATGAGCCCCTTTGAAAACAAAGCAAAAGGCGTTTGGATTGGAGGGCATAGTTTGAAAATTGGGAGTAATGTGGATAACGAAACGAAATTGATTAATGCTGTGGCCAGCATCAGCGGAGCTGTCAAGAAAGATATCCCTACATCTTCTTACAGTATTAATTACAACGATTATAAGGGAGACGAAGAAAGCGATCAATCAGACGACTCTGAAGAAGATGATGATGAAGAGCACGTCGGTGAAAAATGGAAGCCTCCTCCTAATTACACTGGAGGTAAATGGCGCCCAGTGTCCCCTGAGCATGAAGATTGGGATATGAGAGATGAACAAGAGCATACAGGCGGGAAATGGAAACTTCTAATGCCTGATGGAAATGACAGAGATGAAGATTACGACGCGCCTCCTCCAAGCCATACAAAAGGGAAATGGGTGCCCGGAGCAAATGATAAGACCCAGATAATGCAGACGACCTTACAATCGAAGGGATCTGTTCAATACTGGTGCGGCCCATGTAACAGGAGATTAGGATCTAGGGCTATTTATGATAAACATTTGCGATCCAGCTTACATCTAAAGAAAGTGCTTCCAGAACATGAACTAGAATTTTCAGGACATTTGGAGCCAATGAAAAGTATAGTTGATAAACGTACGACTCGTCCATCTAGATTCATAAATAACAGCATTTACTCCCAGGTACACAGAAAAAAACAGAAAATCGCTTCTAAGCTGAATGTTAAAATTGAAATGAAGAAACGCAAGAGAAAACCGAATTTTATCCACTGCCCTGGCTGCAAGTCCCGCGTCAGGCAACACTTGATGGGGAAACATCTCATATCACACTACCACTTCAGAAAAACTACAGACGCCAGTAGTAACTTATATCAGCAACTCATCTTGGACAACATAGACGCCATAGTTCACCAATCGCCATTTCAATGTAGCCCATGTAAATTCTACACCAACTGGTTTTCGAGTTTCATGCAGCATTGGCTCTCAGAAGAGCACGAAGAGCGAGTGGCCTCCATTGAAGGCAGGTATTGGTGTTCCTTCTGCAAGTTTGAGTGTGATACCTCCCAAGATATGGGCCAGCATATGTCCAGCTCGGACCATAGCGAAGTGATTGCCGTTATAAACAGATCAATGCCGATAATAATAAGAAAAAAATCTGTACTGAAATGCGAGACATGCCATCAAGACTTCCGGTATAATATCGAATTGAAACTACACTGCATTAAAACTGGACACAGTTTATCAGAAACTGCTACAGATTACTATCAAGAAGTTCACAGTTGCCAGATATGCAAAGCTAAATTTAAGTCATCCTTGACGTTAGCAGCTCATTTGAAGCGGAGACACAAGCAACGGTCCTATCTATGCCTGGTCTGTTCTCAAACCTTCAATACCTCAGAGGAGGCAAAGCGCCACAGACAGACTTCAGTGCATAGGATTAAAAGGAAAGAAAAGTTAAAGGAACAGGGAAAGGTTATTAAAGATTTGAGTAAGAAGTGCCCTTACTGTACGGATCTCGTGGTGCTGAAGAACATATTGGATTTAAAGGAACATATTCGAAGGGCTCATACAGATATCAGAAAAAAATGTCCCAAATGCGGGATGCAGTTCATCCTGTCGCAAGAAGTGACCCGCCATGTAAGAGACAACGCATGCCAGTTCCAAAACACAAGTCAAAGTGCTTGTATATTCTGGAACTGTAGTCAGTGCCTCTTCACCACCGACTCCCAGGCCGAATGTTTCTTCCATGAAGTACTGCACAGCACTCCCGCAAGAGAGATCCGGAATACAGGTGTGGAGGAAAAGGTCGTCTTGAAATATACTTGTCCTCTATGCCCGAAGAGTTTCCGCAAGGACTCGTTACGACATCATTTGCGACAGCATACGTTTGAGAGGCCGTTCGTCTGCACCACTTGTGGCGCGAACTTCACGAGACAGACGAGTCTCGCGAACCACTTCAAGCATGAACACGGGACTGAGGTGATTGACAACATGCCGAGGCTGTCGAGTATCAGAGAGAGCATTCAAGAATTGGATGTCGAGTGGATTTGCGGACAGTGCAGCATGCGATACCCTAGCAAAAGTCAATTGAGCAGACATGTCTCCGGGTGTACTCAACCATGTGACGAACGGAGATGCCTACATGACCAGTGTACCTTTGTGGCAACCTCTGCGACTCAATTGGCTAAGCACAGGAGATCCCACGGGGTGCGAGTAAAGCACCACAAATGTGACCTGTGTCCCTTCCAAAGCGACCAGGCCAGCCACTTGAAGCGGCACTTGCTTTGCCACGCGAACATAAAGCCCTATGCTTGCCCACATTGCGATTTTGTCTGTAGGAGTCTAGAAAACCTCCGTAAGCACGTACTCCGCAGCGGTCGTCACCCCGGCCTCTACTTGTACCATTGTCGCTCGTGTGTATACCAATGTAACATGGCTACGGAACTGAGGGCACATTTGACTACTATTCACTCGTACGACGCTAAATCTGCGCTAGAGGCTGCAAAGACACATTTGATGCTAGAGTTTAAGGCGTAA
- Protein Sequence
- MLSPREDDDDDTHLCIKCNATVTGLDNYVQHRKQRCGKLSKSDPAKPDLPPIDTLEPSYSLGADVFFQSLELQSSVKKTSLSRLTPPITKANIDMKGPLAVASTSKDTPRMSPFENKAKGVWIGGHSLKIGSNVDNETKLINAVASISGAVKKDIPTSSYSINYNDYKGDEESDQSDDSEEDDDEEHVGEKWKPPPNYTGGKWRPVSPEHEDWDMRDEQEHTGGKWKLLMPDGNDRDEDYDAPPPSHTKGKWVPGANDKTQIMQTTLQSKGSVQYWCGPCNRRLGSRAIYDKHLRSSLHLKKVLPEHELEFSGHLEPMKSIVDKRTTRPSRFINNSIYSQVHRKKQKIASKLNVKIEMKKRKRKPNFIHCPGCKSRVRQHLMGKHLISHYHFRKTTDASSNLYQQLILDNIDAIVHQSPFQCSPCKFYTNWFSSFMQHWLSEEHEERVASIEGRYWCSFCKFECDTSQDMGQHMSSSDHSEVIAVINRSMPIIIRKKSVLKCETCHQDFRYNIELKLHCIKTGHSLSETATDYYQEVHSCQICKAKFKSSLTLAAHLKRRHKQRSYLCLVCSQTFNTSEEAKRHRQTSVHRIKRKEKLKEQGKVIKDLSKKCPYCTDLVVLKNILDLKEHIRRAHTDIRKKCPKCGMQFILSQEVTRHVRDNACQFQNTSQSACIFWNCSQCLFTTDSQAECFFHEVLHSTPAREIRNTGVEEKVVLKYTCPLCPKSFRKDSLRHHLRQHTFERPFVCTTCGANFTRQTSLANHFKHEHGTEVIDNMPRLSSIRESIQELDVEWICGQCSMRYPSKSQLSRHVSGCTQPCDERRCLHDQCTFVATSATQLAKHRRSHGVRVKHHKCDLCPFQSDQASHLKRHLLCHANIKPYACPHCDFVCRSLENLRKHVLRSGRHPGLYLYHCRSCVYQCNMATELRAHLTTIHSYDAKSALEAAKTHLMLEFKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00724335;
- 90% Identity
- iTF_00467785;
- 80% Identity
- -