Dfal015893.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000072.1:1605825-1609149[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 1.9 1.2e+02 3.6 0.2 3 23 51 72 50 72 0.90 2 16 2 1.3e+02 3.5 0.3 2 23 99 121 98 121 0.93 3 16 0.68 42 5.0 2.3 3 23 146 166 144 166 0.95 4 16 0.0072 0.45 11.2 1.5 1 21 170 190 170 193 0.95 5 16 0.55 34 5.3 3.0 3 23 270 291 269 291 0.97 6 16 3.1 1.9e+02 2.9 0.0 2 23 317 339 316 339 0.92 7 16 1.1 71 4.3 0.7 1 23 362 384 362 384 0.81 8 16 0.01 0.63 10.7 0.3 2 21 389 408 388 409 0.95 9 16 0.011 0.69 10.6 0.2 1 23 450 473 450 473 0.96 10 16 0.98 61 4.5 0.2 2 23 499 521 498 521 0.94 11 16 0.0056 0.34 11.6 0.8 2 23 545 566 544 566 0.95 12 16 0.00019 0.012 16.2 0.0 1 23 570 593 570 593 0.97 13 16 0.03 1.9 9.2 0.9 1 23 597 620 597 620 0.98 14 16 2.6 1.6e+02 3.2 0.3 1 23 625 650 625 650 0.89 15 16 0.00036 0.022 15.3 1.8 1 23 659 682 659 682 0.97 16 16 8.6e-05 0.0053 17.3 0.5 1 23 692 715 692 715 0.97
Sequence Information
- Coding Sequence
- ATGGACTCGCCATCTGTCACGTTGGCACCTAAAATATATCTCTGGCGGAATGTGGAATTGGAACCCCATATTCTGGCGAAACGGAATGCTGAGGTTGTGTTGCAATACTCGACAGTTTATCCATTCCGACTGAAGGGAAAACTATTGCTTTGCGTCTACTGCTGCGAAGAATACGAAGATCCTGCTGATTTCAGGCAGCATATGGACGATGCCCACCAAAAGTTCACAGTCTCTACCGCCTTTGCTCACGTGGGGAAAGGCAAAGATTATCTTAAAGTGGACTGCACAAATTTGTCTTGCAGACTATGTTCAGACACGTTCAATAGCATTAATGATGTCGCCAAACACATCAATGAGCGACACGAGAAGAAAAGACTCCGGTTGGAATATGATGTAGGCATGATGCCGTATAGATTGAAAAAGGAGAGTTGGATCTGCTTTCTTTGTAATCTGAAACTGCCGACGCTCACAAAGCTATGCCGCCACACGACCTCACACTATCAAGATTACACTTGTGATGTTTGCGGTAGGAGTTACTTGACTAATGAAGCTCTTAGATATCATATAAAATGCAGTCACACAGGGAACAATGTGTGCAGAAAATGCTGGCAGGATTTCCCTTCAATAGAGAAAAAGAAAGATCATGTCAGATTTTCCAGAAAATGGATCGCATTGGAAATACTGCGCAAGGGTCAAGCGCGCAAGAAAATAGTGCTTGTTTACCAGACGCCCCAACGGCGCAATGCCGAGCTCATTCTAAGGCACTCTACCGCGTTCCCCTTCAAAACTAGGTTTAGTCAGATTCTGTGCGCGCACTGCCACGATGAGTTCAGCTCTCTCTCGGACCTGCGATTCCACATGACAACAGAACACGTCGAACAAACGGACTTTAAAAATGTTTTCTTTAGAGCCAAAGATGACTTGATTAAAATTGATATTACTGGTCTTAAATGTAAAATATGTGCCGTTGAAATAGCAGATATAGATGCTTTAGTGAGTCATTTGTCTAGGGAGCATGACATTCCTTTCAAGTTTAATGCTCGATTTGGGGTCGTACCCTACAAACAGAATGCCGATAGCAATTTCGTATGCGTTTATTGTCAGAGAGTTTTTCTTGAATTTGTACCTTTCAAGCGCCACATAGGGTATCATTTCATGAGTTCTACATGCGAGAAATGCGGTTCCATGTTCGTTTCCGATCACGCGTTACGAGATCATCTACGACAGGTTAAATGCTTCAGGACGGCATATAAACCTCGGAACGGGCGAGCTATGAAGCCGCGGACGAACGCAGCGATAATCCTAAGTTGTTCCACGGTTTGCCCTTTCCGAACTTGGATGAATAATTTCAGTTGCGTGTTCTGTCGCGTGCAGACTAGCGATCCCAGTGGATTAAGGGTCCATATGGCGAGTAGACACGCCGATTACGACGTGCAAGCTGCCTTCTACAAAAAACTAGGAAAGGATTTTCTCAGCGTCGATATAACAGATCTCCAATGCAAGCTGTGCTTCATGCCCATTGAGAACTTCGATTCGTTGGCGTATCATTTGAAGAATGATCACCAACAGCCCATAAATACTGATGTTCAGATTGGTTTGTTGCCGTTTCGTTTGAACGACGGGTCCATTTGGAAGTGCACGATATGTCCCAATGAGTTCAAAGACTTTCTGTCGTTAAAGAAACACACCTCGGAACATTATCAGAATTACGTATGTGACACTTGCGGTGAAGGTTTTATTACGGAATCGGCTATGATCGCTCACACTAAGATACCTCACGAGAACAAGTATAGCTGCAACAGATGTATAGCCACCTTTTCCACGTTAGACGAGAGGAATACGCATATTAAAACACAGCATACACACACGCCCTACATGTGTGTCTATTGTAAGGACAAGCCCCGTTTCGCTAATTGGGAACTGCGCAAAAAGCATCTAATGGAAGTACATAATTACAGAACAGGAGCGGATAAATACGAGTGCGCTACATGCCAAAAATCGTTTAAGACGAGGTCAGGCAAATATAACCATATGGCGAGGACCCACAGGATTAAAAAAGACTCTGATCTAAACTATCCGTGCCCAAGTTGTCCAAAAGCTTTTACTACTAAACTATTTCTGGACAAACACATGGCCAAAAAGCACTTCGACGTATAA
- Protein Sequence
- MDSPSVTLAPKIYLWRNVELEPHILAKRNAEVVLQYSTVYPFRLKGKLLLCVYCCEEYEDPADFRQHMDDAHQKFTVSTAFAHVGKGKDYLKVDCTNLSCRLCSDTFNSINDVAKHINERHEKKRLRLEYDVGMMPYRLKKESWICFLCNLKLPTLTKLCRHTTSHYQDYTCDVCGRSYLTNEALRYHIKCSHTGNNVCRKCWQDFPSIEKKKDHVRFSRKWIALEILRKGQARKKIVLVYQTPQRRNAELILRHSTAFPFKTRFSQILCAHCHDEFSSLSDLRFHMTTEHVEQTDFKNVFFRAKDDLIKIDITGLKCKICAVEIADIDALVSHLSREHDIPFKFNARFGVVPYKQNADSNFVCVYCQRVFLEFVPFKRHIGYHFMSSTCEKCGSMFVSDHALRDHLRQVKCFRTAYKPRNGRAMKPRTNAAIILSCSTVCPFRTWMNNFSCVFCRVQTSDPSGLRVHMASRHADYDVQAAFYKKLGKDFLSVDITDLQCKLCFMPIENFDSLAYHLKNDHQQPINTDVQIGLLPFRLNDGSIWKCTICPNEFKDFLSLKKHTSEHYQNYVCDTCGEGFITESAMIAHTKIPHENKYSCNRCIATFSTLDERNTHIKTQHTHTPYMCVYCKDKPRFANWELRKKHLMEVHNYRTGADKYECATCQKSFKTRSGKYNHMARTHRIKKDSDLNYPCPSCPKAFTTKLFLDKHMAKKHFDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00724265;
- 90% Identity
- -
- 80% Identity
- -