Basic Information

Gene Symbol
ZNF526
Assembly
GCA_945859695.1
Location
CAMAOO010000089.1:1092800-1108093[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.00042 0.026 15.1 1.7 1 23 260 282 260 282 0.98
2 11 0.061 3.7 8.3 2.1 1 23 289 311 289 311 0.96
3 11 0.096 5.9 7.7 0.2 1 23 315 338 315 338 0.98
4 11 0.017 1 10.1 5.7 1 23 343 365 343 366 0.95
5 11 9.8e-05 0.0061 17.1 0.9 2 23 372 393 372 393 0.98
6 11 0.012 0.73 10.5 2.4 1 23 399 421 399 422 0.92
7 11 0.00013 0.0078 16.7 2.6 1 22 432 453 432 457 0.93
8 11 0.00056 0.035 14.7 0.0 1 23 465 488 465 488 0.96
9 11 0.0012 0.076 13.6 3.8 1 23 494 517 494 517 0.97
10 11 1.4e-05 0.00088 19.7 1.0 1 23 526 548 526 548 0.98
11 11 2.8e-05 0.0017 18.8 0.8 1 23 554 577 554 577 0.95

Sequence Information

Coding Sequence
ATGGAATCCACAAAGCTAATGTCTGTAACAAACAGTGAGGTGGACTCTAAAGTGGCTAGATTTAATTGCCGTTGTTGTTTCTCTAGTAACAAACGAGTGCTTAATGCAAGTAAATTTCAAGAATACTTTATGGAGCTGACTGGCATATCAGTGAAACATCTTAATGAAGAGCCACAGTGGATCTGCTACGAGTGTGGTGCACGGCTGCAAAAGGCAGTACACTTCAGACGCCAGATAATAAATGCACACAAAATTATGTGCGACTACATTGAAACATGTACTCCATTGCCAGTTGAAGTAAGCTCTCCGCTATGTACCACCAAAGTGCTGAGGTTCAGTGTCTGCACAAAGAAATCTGGCTACCAGAAGGTTTTGACACACACCAACAGGCCCCAGCAATCAGAAGTAAAACTGTTGGATCCTCCTAGAATTGTCTTCAATACAAATCCTTATATAAAGCAAGAGATATGGACAGATCACGAGGCTGATGTTACATTACGACAAGAGTCTGTTTTATACTCCGAGAGTCATGATGTCAAAGAAACACAGGGCTTAATCAGCCCAAGAACTTCTACCAAATGTAAAAATGTGCCACGTAACGTGGACAATGATGATTCTGAGGAAAACTTGAGTGGTCAAGATAATCCGCGGAGAGATCCGAAGACTGATCCTAAGACAGTAGAATTGGATCCGGATAAGATTAGGATTATCATTCTGAGTGAGGATGAGCAGTTGAAGCAAAGGGAGGAAGACAAGACAACTGGTCTTAAGTTCCCGTTCCAATGTATGCTTTGCTACAAAGGGTACAATTATGAGTCCACACTTAGCAGGCATATGGAGAAACATGATCCGTGCCACGGTAGGTTCAAGTGTGAAGTATGCCACGTGTATTTCCCCACCCCGTACACCTACGGGCTGCACGCACACATGCACGGCCGCAAGTACGAGTGTGTGCGCTGCGGGCGGCGTATGATCGACCGCGCCTCCATACTGGAGCACTACAGGACTCAACACGAAGGTGTCACGTACATTTGTAATGTTTGCAAAAAAGTATTTAGCAACTTCAAGACACACCAGGGTCATATGCGCAACCACCACCGAGGCACTCGGCCCCAGTGCGGGGAGTGCGGCAAAAGCTTTCTCAACAAAAACTCGCTCACGGAACATAAGCGGATCCATGAGGGTGTGAAAAGCTTCGAATGTGCGCCATGCAACCTCAAGTTTCGCACCATATCACAGCTGAGACAACATCGCTCCAACCACCATTCTGATAATACCAAAACTACACAAGATTTTTACTGCGTGGAGTGCGACGAAAGGTTCAAAACGATACACAATTTGAGGAAACATCTCCAGAAGAGCTTGAAACATCAAGACGAGAACAATTTCAAGTTCCCGTGCGCGCAGTGCCCGCGGCGCTTCGCCAGCCCCGCGCAGTGGCGCGCGCACGCGCAGGTGCAGCACGAGGGCGTGCGCGCGCACCGCTGCCACACTTGCGGCGCCGGCCTGGCCTCGCGCTCCTCGCTGCACAAGCACCAGCTCACTGTGCACGGCGGCCGGCGCCCCAGCCGCGGCCACGTGTGCGACACTTGCGGCCGCGCCTTCCGGAGTAAAAACGTTCTCGTCAACCACGTGAGGACACACACGGGCGAGAAACCTTTCGCTTGTACTGAGTGCGGCCGGAGCTTCGCCCAACGGACGACTATGCAGACTCACTACAAATTGGTGCATTTGAAATTGCGCAGGAAACAGAAGGTATTGTTCGCGCCCGCTACatcttaa
Protein Sequence
MESTKLMSVTNSEVDSKVARFNCRCCFSSNKRVLNASKFQEYFMELTGISVKHLNEEPQWICYECGARLQKAVHFRRQIINAHKIMCDYIETCTPLPVEVSSPLCTTKVLRFSVCTKKSGYQKVLTHTNRPQQSEVKLLDPPRIVFNTNPYIKQEIWTDHEADVTLRQESVLYSESHDVKETQGLISPRTSTKCKNVPRNVDNDDSEENLSGQDNPRRDPKTDPKTVELDPDKIRIIILSEDEQLKQREEDKTTGLKFPFQCMLCYKGYNYESTLSRHMEKHDPCHGRFKCEVCHVYFPTPYTYGLHAHMHGRKYECVRCGRRMIDRASILEHYRTQHEGVTYICNVCKKVFSNFKTHQGHMRNHHRGTRPQCGECGKSFLNKNSLTEHKRIHEGVKSFECAPCNLKFRTISQLRQHRSNHHSDNTKTTQDFYCVECDERFKTIHNLRKHLQKSLKHQDENNFKFPCAQCPRRFASPAQWRAHAQVQHEGVRAHRCHTCGAGLASRSSLHKHQLTVHGGRRPSRGHVCDTCGRAFRSKNVLVNHVRTHTGEKPFACTECGRSFAQRTTMQTHYKLVHLKLRRKQKVLFAPATS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00467629;
90% Identity
iTF_00467629;
80% Identity
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