Basic Information

Gene Symbol
-
Assembly
GCA_945859695.1
Location
CAMAOO010000069.1:2507461-2535947[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 3.8 2.3e+02 2.7 0.2 2 23 473 494 472 494 0.94
2 18 0.014 0.87 10.3 0.1 1 23 504 527 504 527 0.95
3 18 0.31 19 6.1 1.3 1 20 646 665 646 667 0.90
4 18 1.7 1e+02 3.8 3.7 2 23 716 737 715 737 0.95
5 18 8.4 5.2e+02 1.6 2.3 1 23 749 773 749 773 0.89
6 18 6.2e-05 0.0038 17.7 0.3 2 23 780 803 779 803 0.97
7 18 0.071 4.4 8.1 0.2 1 23 809 831 809 831 0.93
8 18 0.0064 0.39 11.4 5.3 1 23 837 859 837 860 0.96
9 18 1.6 98 3.8 0.2 2 19 870 887 869 890 0.90
10 18 0.33 20 6.0 0.2 1 23 969 991 969 991 0.97
11 18 2.1 1.3e+02 3.5 7.2 1 23 998 1020 998 1020 0.95
12 18 0.0014 0.087 13.4 1.8 1 23 1058 1081 1058 1081 0.95
13 18 0.0029 0.18 12.5 0.6 1 23 1088 1111 1088 1111 0.98
14 18 0.0039 0.24 12.0 0.2 2 23 1131 1153 1130 1153 0.96
15 18 0.027 1.7 9.4 4.9 3 23 1175 1196 1174 1196 0.92
16 18 0.0018 0.11 13.1 0.1 3 23 1214 1234 1213 1234 0.98
17 18 0.00013 0.0082 16.7 0.1 1 23 1240 1262 1240 1262 0.97
18 18 0.0002 0.013 16.1 0.7 3 23 1270 1291 1268 1291 0.94

Sequence Information

Coding Sequence
ATGGAGGACACTCAGCCTCCACCTCTGTTACTGTGTATGGAGAACGCGTCTGGTGAGGAGGTGGCCCTGAACATCGATCCTCAAGATGACTTTCGAGCGTTTCTGGATAAAGCCAAGTCTCTTCTAGGCTATGAAGTAGACATAAACTCAATAACCCGCAATCAAGAGGTTTGCTTAACCGACAACGTTTACCAGTTCATTCTAAACGCTGAGCAGAACCTCGCGGACACTGGCGGTCTAGGCCAGACATTTGACCCAACGTTGGACCAAAGTGATCAGAACGATCTAGTATACATTTTAGACGACGGCACCCAAATAAGAGCGTCGCAAATCCACTTTGACAACGAGGATCCGCACGTAGATTTGACAGCGGTTAACATACCGTTTGTCAAATATGCCGATTGTGTTGATGAATTGGGTATGGAAAATCTTAATATTGAGGAGAAAAATTACAACATCATCGACAGTCCGGTCTCTCGGTGGTCCAGCAAGAATTCCAGTCCGAAGCGCAGTTTTGTTAACAGTCTGCCTTTCAGACTGATTAGCAATAATACATCGGCGTTTGATGCTCACTTCACAAAGTGTTTGGAAGCTAGCATCAAAACTTACGCCACTTTGAACCCTGTGGCTAACAGAAATAGGTCTCCAAGAAGCTTGATCAAGGATAACTTTAAGAAGTTCGACGATATCCAACGAGAAAACTGTGGGTATACTCGAGAGGAAGTTTTGAACATGTTTAAAGATTCACCAGTAGCTTCACTTCCCTACGAGAACCAGGAACGGAGGCACGTGAGAAAGACTGACCCCTCAAGGCTCCATAAAAGCTGGAGCAGGCCGACCTATGTAGACATAGGCGGAGTTCTCATAGGTGGGAGCGAGAGCCAGATATGTTTCATATGCGGCAAACACGTTGACAAAAACGCGGATAAATTGTATCTGTTCGACAACGAAGACCAAAAGATACACAGGTGCTCTCCGCAGAAGAAGATGTCGACTGAGCTCAAAATCATTTGCGAGGATTGTCTCAATGAGAATTTCAAGCCGTCTCGCATGAAAAGCGCCAATCAGTTTCTAGATTCGGACGAGTATTTGGTCATTAGGAATAATCAACAGTATATATTTCAGAAGACGAAGAATTTCGACTATAACGTGTCTAAAACTGATAATTGTATTGATAAACACGAGCTGGTCAAAGTCGAGATCGGCTCCGATGGGGAGATAGTGACCAAGCCTGTAGACGATTCGAGATCTGACATCGTAATTGTGAAAGATGAGAGGGGTAGCTCCAGCGATGTAGAGATTGTGGAACCGGAGTCGGAAATAGACCAGATTGTGGCCAACTTGGATGACGCTGATGAAGATGTGAAAAGATTCCTTGGGAAGTATCAGTGTGATGCTGAAGAGTTGACAGAACTGAAGTGCAGGTTTTGTGCCAAGCTGTTCACAACAATACAAGAGGTGATAGACCATGGGGAAACACATAAACATGATCTTGATGATGGAGAGGTTTATCCTTGCCCGCTGTGCGATTATGGGTACGCCAACTTCAAATGGTTGAAAGGTCATTTCAGAGCAGCTCATGACAAACCTGAAAAGGATCGTGGTCGCAGGGATATTGATGTGGAGATTGTAAAAGAAGAGAATCCAGATAGCGGATGTCTTGATGAGACCTCCCCGATCGCAAGACGAACTCGCAGCTCTATTAAGAAGAGTGAGGGTGATAAAAAAGATGACCCGGCGAAGAAATCTGAAGATGATATTAAATCGGAGCCTACAGCTGACTTGAAAGAGGCTGGATTAATAGCTGAACAGAAAGTTGACAGCAGTGATGATGAGATCTGGATAGTTCACACGGCTGATGAAGAGGCTGCGCAAGAGTTGCAGAGGCTGATCGACGCTGCTAAGCTCAAGGATGAGAAAAACCAAGATAAGACATTCAAATGCGTCAACTGCAGTCAAGTGTTCACGTCGCCTGAAGGGCAGTTGAACCATAAATGCCGTCGAAGAGGCAGGAAGAGGAAACCGGGAGTCCAGGATGATAGCGTTATTTGTATACCCACCGAAGAAGATTTCTATAAGTTTTGGATTCCTCAGAGATCCCGAAAGAAAAAGACAAAATCGACGAATTCCGATCCTCAAATAGTATCCTGTCACAACTGCAATGACTCGTTCACGTCGAAAGTGAGACTCAAATTCCACATGCAGTTCCACTCGCAAAGTTCGCTCCTCTCAGCCAATGGGCAGTATTGCTGTGCGGACTGTGAGGACACCACCTTCGCGACGGAAACGGAACTCTTCGACCACGTTCACTTCCAGCATGGCAAGCAGAAACGGTGGCAGTGTCCAGTTGATGGCTGTGGGAAGACTTTCTACTTGAGAGCAACGCTGACAAAACACAGCCGCACGCACACAGACACGCGTCGCTACGTGTGCGTCACGTGCGGGAAACGGTTCCTCGACAAGCAAACCCTGGATGAACATGGGGTTACTCACCTGCAGATCAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGTTGACGCGCCGCTCGCGCCTGCGCATGCACCTGCGCGCGCACCACGAGGAGCTGGCGCCGCGCCACGTGCTCGTGTGCGCCGTCTGCGCGCGCGCCTTCCGCGACCACACGCACGCGCAGGAACACGCAACAAAATCCCCAGAGTGCATCGAAGCCTTCGCCAGCGAACTGAAGGAGGAAGCGGAGGAGGTGACTGTCCAGCTGTCCCCGACTAGTGGGCATGTGAGGCAGTCTGTGCAGATAGTTGAATCGCCTAAACTATCAAAGCCTATTCAAAGACAAGTGGCCAGTCCAGTCGGCGAGACCTTGCTCGCTAAGGTGTCTGATGATGCCAGGTCCATCATAAGAGTCGTGGAAATTGAGAAGGCCTTCCGTTGCGAGTTTTGTGAGGATGTATTCTACATGGAGGAAGGTCTGAACACTCATCGCGCCATTCACAAGGGTGTGAAGAATCCATTTACTTGCCACATCTGCAAGGTCAGCTTTGCTACGTATTCAAGATGCACGACCCATAAGACCACCCATGGATTCTACAAGCGCCCTCTAGCGGCAGGGCCGGAAACTTCTGCTGAACAACATTGCACCCCTTCCACGCCGGCCATATTGGGTTATGGTGATTTCCCAGTTGTCAAACATTTTCTTTGTGAGGACTGCGGCCGTTCATATCTACACTGGACGTATTTACAAGTGCATAGGAGAATGAAACACGCCAATGAGAACTTCCTTTACAAATGTAACCAGTGTGAATTGACCTTTCCAAACAGTTGGAGTGTCGCGTATCATCGTAAGAAAGTGCACGGGAAAACAGACTCTAACGGCACTGCTACTAAGGTCTTAAGGGAGGATTACAGAATCCCATGCCGCGACTGCGACGAGGTGCTGCCAAACAAGACTGCGCTCTATAAGCACAGGAAGAAGGAGCATAGTGACGTGTCGCTGAAAATAAACTGTCAGCCAGGCCAGCCCGCCGCGCCGCCGCCCGCCAGCTGCGCCCACTGCGGCCTCACCTTTGCGCACGCGCATGAGCTGCACACGCACTTAACGGAGAGCCACGGCCACACTGCAGACAACCCTTGCCAGACGTGCTCCAAGCGGCCGCACGGCTGCGGCGTTTGTGGCCGCACCTTCCGCACGGCCGCCATGCGCGCCGAGCACCTGCGCATACACACGGACGAGAGGCCCTTCCCCTGCGACCTGTGCCCCTTGGCTTTCAGAAGGTCCAGCGCGATGCGCAACCACCGGCTGATCCACTCGGGCGTGCGCGCGTGGGCGTGCGTGCGGTGCCCCAAGAGGTTCCGCGTGCGCTCAGACCTCAGGACACACCTGCGGCTGAAGCATCCCGCCACGCTGGCCGTGCTCGAGATAGAGGGCCTCAACCCTACGTCCGAGGATGTGCTGCGTGTCCTGGCCCTCAACAACATTGCGCAGGAGAAGGTGCTGGAAGTGAGCAAGATATCCTTCCCAAAGGGTACGTCCAACATAGTGCCGAATACTGCCCGCGCTCTCGCAATGTTGAGCAATGTGCCCAGGACACAGCTGGTCATAAACCAGCCGCCACCAGCACCAGCGCCTCTTGTAGAAGAGTTCCAACCGGTGAGGCGCGGCAGGGGCATAGCGAAGAACCCCCGTAGACCCAAGATCTTGAGGGGTGATGATGAGGACACTGGCAGGGTATACTCAGTCTCTGATAGTGTTGGTCAGACTTTATCCGATATCAATGTCCAACTGCTTTTGAGAGATGGTGTGCTGGTCAACGGTAATCAAATGGTGCAACTACAGTTGGACGACTCTATGCTCATGGAGTAA
Protein Sequence
MEDTQPPPLLLCMENASGEEVALNIDPQDDFRAFLDKAKSLLGYEVDINSITRNQEVCLTDNVYQFILNAEQNLADTGGLGQTFDPTLDQSDQNDLVYILDDGTQIRASQIHFDNEDPHVDLTAVNIPFVKYADCVDELGMENLNIEEKNYNIIDSPVSRWSSKNSSPKRSFVNSLPFRLISNNTSAFDAHFTKCLEASIKTYATLNPVANRNRSPRSLIKDNFKKFDDIQRENCGYTREEVLNMFKDSPVASLPYENQERRHVRKTDPSRLHKSWSRPTYVDIGGVLIGGSESQICFICGKHVDKNADKLYLFDNEDQKIHRCSPQKKMSTELKIICEDCLNENFKPSRMKSANQFLDSDEYLVIRNNQQYIFQKTKNFDYNVSKTDNCIDKHELVKVEIGSDGEIVTKPVDDSRSDIVIVKDERGSSSDVEIVEPESEIDQIVANLDDADEDVKRFLGKYQCDAEELTELKCRFCAKLFTTIQEVIDHGETHKHDLDDGEVYPCPLCDYGYANFKWLKGHFRAAHDKPEKDRGRRDIDVEIVKEENPDSGCLDETSPIARRTRSSIKKSEGDKKDDPAKKSEDDIKSEPTADLKEAGLIAEQKVDSSDDEIWIVHTADEEAAQELQRLIDAAKLKDEKNQDKTFKCVNCSQVFTSPEGQLNHKCRRRGRKRKPGVQDDSVICIPTEEDFYKFWIPQRSRKKKTKSTNSDPQIVSCHNCNDSFTSKVRLKFHMQFHSQSSLLSANGQYCCADCEDTTFATETELFDHVHFQHGKQKRWQCPVDGCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHHEELAPRHVLVCAVCARAFRDHTHAQEHATKSPECIEAFASELKEEAEEVTVQLSPTSGHVRQSVQIVESPKLSKPIQRQVASPVGETLLAKVSDDARSIIRVVEIEKAFRCEFCEDVFYMEEGLNTHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLAAGPETSAEQHCTPSTPAILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSVAYHRKKVHGKTDSNGTATKVLREDYRIPCRDCDEVLPNKTALYKHRKKEHSDVSLKINCQPGQPAAPPPASCAHCGLTFAHAHELHTHLTESHGHTADNPCQTCSKRPHGCGVCGRTFRTAAMRAEHLRIHTDERPFPCDLCPLAFRRSSAMRNHRLIHSGVRAWACVRCPKRFRVRSDLRTHLRLKHPATLAVLEIEGLNPTSEDVLRVLALNNIAQEKVLEVSKISFPKGTSNIVPNTARALAMLSNVPRTQLVINQPPPAPAPLVEEFQPVRRGRGIAKNPRRPKILRGDDEDTGRVYSVSDSVGQTLSDINVQLLLRDGVLVNGNQMVQLQLDDSMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-