Dfal014505.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000061.1:1393662-1407716[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.095 5.8 7.7 1.2 1 23 261 284 261 284 0.92 2 11 0.00025 0.015 15.8 0.2 1 23 318 340 318 340 0.99 3 11 0.00015 0.0093 16.5 0.6 2 21 346 365 345 366 0.92 4 11 0.0003 0.018 15.6 2.0 2 23 373 395 373 395 0.94 5 11 0.00037 0.023 15.3 1.5 2 23 407 428 406 428 0.94 6 11 0.00018 0.011 16.2 0.6 1 23 433 455 433 455 0.98 7 11 5.1e-05 0.0031 18.0 5.1 1 21 464 484 464 489 0.94 8 11 0.00072 0.044 14.4 2.8 1 23 497 520 497 520 0.92 9 11 0.012 0.75 10.5 0.2 1 23 526 549 526 549 0.87 10 11 0.016 1 10.1 0.4 3 19 562 578 560 579 0.89 11 11 0.044 2.7 8.7 1.9 1 23 592 615 592 615 0.96
Sequence Information
- Coding Sequence
- ATGAAGGAAATCAATATAAACATAGAGGGATACAATGTTAATGGTATATGCGTTGGGTGTCTCAATTATAATCGAAAGATGTATTACCACAAGGACGTAAAAGAATTCTATCGCATATTAGGCGATATTGATGTGCCTGATGGCTTGGTAATACAGGTCTGCTGGCAGTGCTTGGCAGCAATACAAGCAGCTAAGCGGTTCCAGGAGAAGATTCTCAGGTCTTTTGATATACTGAGCAAATATTCACGAAAGCATAAATTTTTAAATTCACCAGAAGACTTATCAACACATGCAGACAATACTCTATCTATAGTAAAACTAGAGTCCACCTCAACATCGCTTCAAGAACAAGAGAAGGAGAGAGAGGCAGAGGATAAAGAGATTATGAAAGTAGAAGGGGACAGTGACTTTTTGATATTTGATGTAGAGCCTAAAGAAGAATTAAATACTGATGTATCCAACTTTGATGAGGAATTGTCGCAGGACTTTGATAATATTGCCCAGGACCCTGTTGTCACATCTGATGATGATATTCAGCTCTCTAAGCTGAAGAAGAAGAAAGTAAAGAAGGAAAAGAAGACTAAAAAGGAAAAGAAAGATAAACTATCCCAACTTAGTCCCTTCTACCAACAGCCAAGACCCGATGACGAGACACAGAAGCGCCTCAGAAAGCTGAAGAACTTCCCCGAGGGTCTGGTCTCCCTCTACACGATGAGCGAGGAGGAGATGTGGAGGGTCAGGGCCGAGGACATCGCCAGCGAGCAGTTCGCCAAGCTACAGCACAAGTGCGTAGATTGTGTCCTGGCGTTCAACTCGCCACAGGTGATGAAGCACCACATGGATGGGAAACATCGGAAGAAGTCCCGCGACTGCCACCAGTGCGACGTGTGCAAAGCTTACTTCCTGAGCCGCGACAACCTGTCGTGCCACCGCGCGCTGCACCTGACTGCCTACCGCTGTGGCGACTGCGGCGTCACCACCAGCTCCAAGAGGCTGATGGCGAGCCACGTGAGGGTACACGCCGCCTCTGCCCTCAGCTGCACTCTATGCGGAGCTACATTCAGCACAAAATCCAAATTGAACTACCATCGCAGCACTTGCGATCAAGAACGACCGCAGTGCGACTGCTGCGGCAAGGTGTTTGCCAACAAGATGACGCTGAAAAACCACTTGAAATCACCCCACAAGCAGAAAGAACCAAAAGAAAAACTTTACATACCCTGCAAAGGTTGCAATAAAGTATTCCACTCCAAGAAGAGTTTCAGATCTCACGTCGTGATCCACGCGGGTGTGACCTACCCGTGTCCCACGTGTGGGAAGCAGTTCCAATGGAAGCGGAACCTCTCCCGCCATGCTCGCAACCATCGCGAGCGAGCCGCTGGTGCTCTGCACGAATGCCGAGACTGTGGGAAGACATTCTCCTCACGAGACTGCTACAATAACCACATGCGACTCAGCAAGAGACATGTGCCCGAGGATGGATACACCCACGTGTGCAACCACTGCGGTAAGCGGTTCCCCACCAAGTGGTGTATGGTGGATCATATCGACTGGGATCATCTAAAGAGGATCAAGTATCAATGTTCAGTATGCTTCAAGGCGTTCAAGACAGCCAAGATAATGGTGGCGCACGTCAACAATATCCACGAAGGGAAGAAGAAGGAGCCGGAGGGAGAACACTTGTGCGATATATGCGGGAAGTCTTACAAGACGGTGAAGCGCCTGAAGGGCCACGTGTGGGCGATGCACACGCGCCGCTCGAGCGCCAAGAGCTTCAAGTGCCACCTGTGCCCGGCCACCTTCACCTGGCAGACCTCCATCTACAAGCACGTCAAGATGATGCACGACTCCAAGAAGGCCAAGCCACCCCGACCACAGCCTCAGGTGAAAAAACAAGAGCCCTACCAGGGTATTGAACTGGCGAACCGCATGCAGTACTTCCAACAGACTAATATCCACCACTCTCTGCCTATACAACCTTCAATTGGAATTGTATCCAATATTCCTCAATAA
- Protein Sequence
- MKEININIEGYNVNGICVGCLNYNRKMYYHKDVKEFYRILGDIDVPDGLVIQVCWQCLAAIQAAKRFQEKILRSFDILSKYSRKHKFLNSPEDLSTHADNTLSIVKLESTSTSLQEQEKEREAEDKEIMKVEGDSDFLIFDVEPKEELNTDVSNFDEELSQDFDNIAQDPVVTSDDDIQLSKLKKKKVKKEKKTKKEKKDKLSQLSPFYQQPRPDDETQKRLRKLKNFPEGLVSLYTMSEEEMWRVRAEDIASEQFAKLQHKCVDCVLAFNSPQVMKHHMDGKHRKKSRDCHQCDVCKAYFLSRDNLSCHRALHLTAYRCGDCGVTTSSKRLMASHVRVHAASALSCTLCGATFSTKSKLNYHRSTCDQERPQCDCCGKVFANKMTLKNHLKSPHKQKEPKEKLYIPCKGCNKVFHSKKSFRSHVVIHAGVTYPCPTCGKQFQWKRNLSRHARNHRERAAGALHECRDCGKTFSSRDCYNNHMRLSKRHVPEDGYTHVCNHCGKRFPTKWCMVDHIDWDHLKRIKYQCSVCFKAFKTAKIMVAHVNNIHEGKKKEPEGEHLCDICGKSYKTVKRLKGHVWAMHTRRSSAKSFKCHLCPATFTWQTSIYKHVKMMHDSKKAKPPRPQPQVKKQEPYQGIELANRMQYFQQTNIHHSLPIQPSIGIVSNIPQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -