Dfal017566.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000089.1:525290-527536[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2.5e-06 0.00016 22.1 2.6 1 23 8 31 8 31 0.96 2 18 0.00061 0.038 14.6 0.1 3 23 38 59 36 59 0.96 3 18 1.6e-05 0.00097 19.6 0.1 2 23 68 90 68 90 0.97 4 18 5.6e-07 3.5e-05 24.1 1.6 3 23 100 121 98 121 0.94 5 18 0.05 3.1 8.6 0.1 3 23 130 151 128 151 0.89 6 18 0.0016 0.099 13.3 1.0 2 23 160 182 159 182 0.93 7 18 2.7e-06 0.00017 22.0 5.4 1 23 188 211 188 211 0.98 8 18 0.00016 0.0096 16.5 0.4 1 23 243 266 243 266 0.96 9 18 0.41 25 5.7 3.2 3 23 294 315 292 315 0.95 10 18 0.073 4.5 8.1 2.8 1 23 351 374 351 374 0.93 11 18 0.00011 0.0068 16.9 2.5 1 23 396 419 396 419 0.96 12 18 5.8e-06 0.00036 20.9 1.1 2 23 426 448 425 448 0.96 13 18 4.9e-05 0.003 18.0 3.8 1 23 454 477 454 477 0.96 14 18 0.0014 0.085 13.5 2.2 1 23 483 506 483 506 0.96 15 18 0.85 52 4.7 6.5 2 23 514 536 514 536 0.95 16 18 0.001 0.062 13.9 0.3 1 23 543 566 543 566 0.97 17 18 0.19 11 6.8 0.7 1 22 573 594 573 596 0.89 18 18 0.00088 0.054 14.1 2.5 3 23 611 632 610 632 0.92
Sequence Information
- Coding Sequence
- ATGTTTCAATCCCAATTGGACTTCATTTGTGATTATTGCAATAGGATTTTCACCAGAAAATATAACTTACAAATTCATATTGAAAGCTGTCACACAATCGCCACGACATTTTGCACGATATGCAATCAGGGCTTTGGAACGGCCAGTGGACTGGAAGTACACCAATCCCGAGGCCACAACCGGTTCGGACAGCAGTTACCTGAGTGTGATATCTGCGGACGAATCTTTACGAGGAAACAAAACATTGTGTCTCACATGATAACAGTCCATTTACAAGGTCTAGGTCCCGATATCATTTGTAAATACTGTGACAAGACATTTTCCTCTGAGAAGAATTTGAAAAGGCACTTAAATCAGCAACACAATCCAAATTTGGAATATGTCACTTGCATTGATTGCAACAAGATATACAAGGGTAAGGAACTGCTTGCTGCTCACATTGATAATATGCATAATATCTCTGTCCCTGGCTCAACACAGTGTCATCTATGTGAGAAAGTATTTCTCAATGCCCGATACTTAAAACGCCACATAGATCTTGTACACCTTGAGAAGAACAGCCACAAGTGTCACTTGTGTCCCAAATTCTATACTTCCAATAGTGGGTTAAAAAGACACATGAAAACTGTCCATAACATTACAAATAAAGAAGACTACACATTTGAGGTTGTCACCCCGGAAACGCCCGAAGTCAACATATCAAAGGTAAATGCCGAATCAGAATTGTACATATGCCCGAATTGTGACAAGTCATTCCAAAGAGAAGGAGAGCTGCGGTTTCACATAAAAGTTTATCATTCTTTTAAAGTATTCTACAAATATTGTCAGCAATACACAAGTCTCCAAAGGGATATTATTGACAAGTATTCATTATCACATTGTGAATACTGCATTTGTGTGTTTGTGAAAGTATTTGAGCTCCAATCTCATATGAAGTCCAGTCATAATATGGAATACATTCCATCTACTTGTAATGTGTGCTTCAATAAGTTTTACAGTATGGAAACAAGGTTGCAACACAGCAAGATATGTCTGCCACCTCTAGATGTTCACAATTGTAATTTTTGTGACAAATTATTTACAGACGTATCAAGTTTAGAGTTTCATACGAAAATTTTCCACCCTCATGCTGTAATTGCTGTCAATAACATCACGTCAACAAATGCTGAGGAACTTGAAAATTCATACAAATGTTCTGAATGCAACAGGTCTTATTACAACGAAAGATCTCTTAAGCAACATGTCAAACTAAAACACGGTACAGATGAGAGCATAGAATGCGTTTATTGTGGCAAAATGTGTTCTAATAGATATTACCTCGCGTCGCACATGAAGACAGTGCATCGCGAGGACAATTGGTATAAATGTGATTACTGCCAGAAGTATTTTAAATCTAAGAGAAATATTCGTAGACATATCGAGTACACACACTTGAACATCCAAAGGTTCAAGTGTATTGAATGTGGGACGCTGTTTAAAGAGAAGAGGAGCCTGAGGAAACATTTAAGGTCTAAACATGAAGACTCGGCCTTATTCCCACAGTGCCACATTTGCCACATGAAGTTCGAGTCTGCGAAGTCGTGTAAGGTTCATCTCAAATTGCTCCATTCTTACAACATGGTCGACTATCCCTGTGATCGCTGTTCGGTTACTTTCAACTCTAATGTCGAACTTTCGCAGCATTTAAGCAAGATACATTCCGGTGAGAGTAAACTGTACAAATGCGATGTGTGTAATCTGGTATTGACGGGAATGGAAAACTTCTGCCAACACAATGAATTAGTCCACGACAACCCGTTCCCAGACGTGAAGCAGAAGAATCAACCGAGATGTATAATCTGCCTGAAGGATTTTAGTACGCGCAAATCGTTGAAGCGACACATACGGAAATTCCACGCGGACTTTAATGTCGATGAATTGGCAACATTCGGCACGAAGCAAAGGACTTTTATGGTGGACTGCGACGAGTGCATTAAAAACTTTAGCGATCAGTATTATGCCAACATATATGACAAGTTAAAAAACACAGAGGGGGCGATAATATTTAAGTGTGAATTTTGCAAGTGCTCCTACAATGTTATTGAGTTTGCTGTGCAAAGGCACAAGTTAGGGACAGATAGGGCTCAGAGTAAAATGGTTTTGAGTGAGCTGTGTACCACTGAGATGAGCGACGAAGACCCATCGTGTTCCGAAATTGGGTCTACAATGGATAGTGAGCCCGTTAGCACTACCACCTTATCTGGTTGA
- Protein Sequence
- MFQSQLDFICDYCNRIFTRKYNLQIHIESCHTIATTFCTICNQGFGTASGLEVHQSRGHNRFGQQLPECDICGRIFTRKQNIVSHMITVHLQGLGPDIICKYCDKTFSSEKNLKRHLNQQHNPNLEYVTCIDCNKIYKGKELLAAHIDNMHNISVPGSTQCHLCEKVFLNARYLKRHIDLVHLEKNSHKCHLCPKFYTSNSGLKRHMKTVHNITNKEDYTFEVVTPETPEVNISKVNAESELYICPNCDKSFQREGELRFHIKVYHSFKVFYKYCQQYTSLQRDIIDKYSLSHCEYCICVFVKVFELQSHMKSSHNMEYIPSTCNVCFNKFYSMETRLQHSKICLPPLDVHNCNFCDKLFTDVSSLEFHTKIFHPHAVIAVNNITSTNAEELENSYKCSECNRSYYNERSLKQHVKLKHGTDESIECVYCGKMCSNRYYLASHMKTVHREDNWYKCDYCQKYFKSKRNIRRHIEYTHLNIQRFKCIECGTLFKEKRSLRKHLRSKHEDSALFPQCHICHMKFESAKSCKVHLKLLHSYNMVDYPCDRCSVTFNSNVELSQHLSKIHSGESKLYKCDVCNLVLTGMENFCQHNELVHDNPFPDVKQKNQPRCIICLKDFSTRKSLKRHIRKFHADFNVDELATFGTKQRTFMVDCDECIKNFSDQYYANIYDKLKNTEGAIIFKCEFCKCSYNVIEFAVQRHKLGTDRAQSKMVLSELCTTEMSDEDPSCSEIGSTMDSEPVSTTTLSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00467573;
- 90% Identity
- iTF_00467573;
- 80% Identity
- -