Dfal015918.1
Basic Information
- Insect
- Drepana falcataria
- Gene Symbol
- -
- Assembly
- GCA_945859695.1
- Location
- CAMAOO010000072.1:1803279-1807000[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.00062 0.038 14.6 5.4 3 23 9 29 7 30 0.95 2 28 0.00081 0.05 14.2 0.3 1 23 34 57 34 57 0.94 3 28 0.0058 0.36 11.5 2.1 2 23 60 82 59 82 0.96 4 28 0.56 34 5.3 0.2 2 19 88 105 87 107 0.94 5 28 0.0005 0.031 14.9 2.4 1 23 156 179 156 179 0.97 6 28 0.52 32 5.4 0.0 3 23 209 230 207 230 0.90 7 28 0.003 0.19 12.4 0.1 1 23 252 275 252 275 0.93 8 28 0.00017 0.01 16.4 0.1 3 23 282 303 280 303 0.95 9 28 2.5e-05 0.0016 18.9 0.1 1 23 308 331 308 331 0.96 10 28 0.00015 0.0094 16.5 0.1 2 23 337 359 336 359 0.95 11 28 0.00023 0.014 15.9 4.4 1 23 363 386 363 386 0.97 12 28 0.0033 0.2 12.3 0.7 2 23 393 414 392 414 0.97 13 28 0.031 1.9 9.2 0.6 1 23 483 505 483 505 0.93 14 28 4.3 2.7e+02 2.5 0.0 3 20 534 551 532 555 0.75 15 28 0.017 1 10.1 1.4 2 23 576 598 576 598 0.96 16 28 0.26 16 6.3 1.2 1 23 603 626 603 626 0.95 17 28 0.00082 0.05 14.2 0.2 1 23 631 654 631 654 0.96 18 28 0.0011 0.065 13.8 0.2 2 23 657 679 657 679 0.95 19 28 0.24 15 6.4 1.1 2 21 686 705 685 706 0.93 20 28 0.0033 0.2 12.3 2.1 1 23 765 788 765 788 0.96 21 28 6.5 4e+02 1.9 0.0 2 20 816 834 815 835 0.91 22 28 0.016 0.97 10.2 0.8 2 23 861 883 860 883 0.95 23 28 6.4e-06 0.00039 20.8 0.7 3 23 890 911 889 911 0.95 24 28 0.0023 0.14 12.8 3.7 2 23 916 938 915 938 0.94 25 28 0.03 1.9 9.3 2.1 1 23 943 966 943 966 0.96 26 28 6.6e-05 0.0041 17.6 5.7 1 23 970 993 970 993 0.97 27 28 0.0022 0.14 12.8 1.8 2 23 1000 1021 999 1021 0.96 28 28 8.8e-06 0.00055 20.4 1.1 1 23 1027 1049 1027 1049 0.98
Sequence Information
- Coding Sequence
- ATGCATCCGGCGAATTGTCTACTGTGCCACAAATGCGACCAGAAGTTCAACAAGAAAAGGGACTTGGATTCCCACATGAGAATACACCATAGACAACAGTATGATTGCCTGAAATGTTCTCAGACTTTTCCGAACAATGCGGCTCTGCAGAATCACAGATCGAATGCTCACATCTCCACTTGTAACATTTGTTTCCAAACATTCTCGTCTGATAGCAAAAGACTGAAACACATGAAAAGCGAACACGTTACGGACGGTGTAGAATGCGGGTTCTGCTTGAAAACTCTCACTACAAAGCAGGCTTTTTTCAGACACGCCGCGCAATGTAACGCGAAGCGAAAACAAAGCGATACGATAGTAGTAGATGAACACGATAAAAGGCAAACGGTAAAAGTTATGAGAAATAATATAGCTTGCGTCCTAAACATGTCTACTGCTATACCCTTCAAGTTCTTTCTGAACAGATTCAGGTGTTTCTATTGTTCAAAAGACTTTATCGATTGCGATGAGCTTAAAGAACATACGATTACTGAACACCCGTATTGCGACACCAAGTTCAAGTCCATGAAACTAAAAAACCGTTACGAAGGAATGAGCATTAAAGTCGACACTTCCAACTTGGCTTGTAAACTTTGCGTCGAAGCTTTTCAAAGCTTGGAAGCGCTTATCGATCATTTGACAGACGAACACAAGGCGTCTTATGACAAGTCTATCGAAAATAATCTGCAACCGTTTAGCTTAGTCAAAGACAATTTCCTATGTCCCCTCTGCGGTGAGGTGTATAGATACTTCGGCATGCTCCTAAAACACGTAAGCGTGGAACATACGGATAATAATATGATATGCGTGTATTGTGGCCAGCCTTTTAGAACCAACCCGAGTTTGCGCGCACATGTACTTAGGCGTCATACAGGGGTCAGATACAAATGTGAGAGATGTGATTTAGGTTTCACCAGCAATTCGGCTTTGATCTCCCACATGGGTAGGGCTCATAGCAGCAAAGTTGTGAAGTGCACGCAATGTCCCGAAATGTTTGCTACCCCGTATTCCATGCAGAAGCATTTAATAGTAGCTCATGGTACGGGGCATAAGTGCACTTACTGTTTGAAAGTGTTTACCAAAAACTCTTCTATGATCAATCACGTCAGGAGGTTTCATTTAAAGGAAAAGAATGTCCAGTGTTCCGTATGTTCCGAAAGGTTTTTCGACTCTCAAAGACTTAAGGTTCACATGGTGAAGCATATAGGCGAGAGGAACTTCCACTGTGATGTTTGTGATATAAAAGTGTTGAACAGATTTGACGGGTACATTTACAGCGAGAACAATTTATTTTCAGATGAGTACCAACCAGGCCCGTACACCAGCTGTACTGCCGAGAGGCGACGAATTAACATGAAAATACTGTTCAACCATACCACAGTGATGCCGTTCAAATGGCGCGGCAGATTCTTGTGCTTTTACTGTACTGAGAGCTATGTCGATTACCCGGAGTTCAGGAAGCACACGCTCGCACACGGCCTCTGCACTACGAAGGATTATGCCCTAAGAGTTATTAAGGGAAACCATATTGAAATTAAAATCGACGTCTCTGAAATTGCATGTGATATCTGCAATGAGGAGTTTGAACAATTTCCGGTTGTGATTGATCATTTGATAGGAAGACACGGTCTGGAGTACGATAAGGATGTAGACATACCGTTCCAAGAATATAGGCTCGTCGACGGCAAGTGTTTACTGTGTGAAGAGAGGTTTACCTATTTTGGCCATTTGGTGAATCATGTGAATAGCACACATCCCCAAAATAAGTTTATTTGTGACGAGTGTGCGCTCCCGTTCAACAAGAAACGTGACCTGGCCTGCCATTTGAGGAACTACCACCGCCAGGGTGGTTACCCTTGCGATCAGTGCGTGCAGGTTTTTGAGACAAAGCTCAGCTTGCGAACTCACATTAATAATGCACATTTCAGACAGTGCAGTAACTGTGGTCTTAGATTTGGTACTCTGGCTCTCCTGCAAAAACATGTTCAGTTGGATCATCCGGAAGTCTGTGAGCTGAAATGCAGTTACTGTATGAAGGTGTTTCATAGTTCACAGGGCGTTAAATTACACATGAGCAAATGCAAAGTTAAAATGCTGTCGGAAGTAGATCTGCCAGTAGACAACTCTTTTCCTGAAGAAACTATCATCGTACCAACAGTTAACAAGAAGAACCAAAATATTATACAAGTAAGAATCAATATTCATTGCGTTTTAAACTTATCAACAGCAGTGCCTTTTAAATTCATGGCCAAGTTTAGCTGCTTCTACTGCTCAAAAAAGTTTATAGAATTCGATGAGCTCAAACAACACACGTCGTCGGAACACCCTGTGTGCGATCTGAAATCCAAAGCGCTAAAGAATTGCAAAGGTGAAAGGATCAGCGTGAAAATTGATATTTCATCTCTATCCTGTAAAATTTGCCGCACGCCAATGGACGATTTGGACACTCTCATAGACCACATAATATGCGAGCATAAAGCGAACTACGACAAGACCGTCAAAGGTTGTTTAGAACCATTTAGAATTCTCAAAGACAACATTCCGTGTCCTCTATGCTTGGAGCACTTTAGATATTTCACAACCCTATTGAAGCATTTAAACTCTGAACACAACAACAATAATAGGATTTGTGATTTTTGCGGACGCAGTTTTAAAAATGTTTCCAACCTCAAGGTACATATGTCGTACAATCACACTGGCGTATGTGAGTGCAACATTTGCGGCCTGAAGTATAAGAACCAATGGTGTCTGGCTCGGCACAGAGCGAAGACGCACGACGCCAAGGACTTCAAGTGCCCAAAATGCTCCGAACGATTCCAGAGTGAATACCGCAAACAAaagcatttgatcaaagtccacgacattggccacaagtgcagttattgcggcaaaatgttcacgaggaactcgtttaagaaagatcatatacggcggacgcatttgaaggagaaaaatgtaacttgctccgtctgcagtgagaagtttttcgataatcacttgttgagaatgcacatggtgaaacacaaaggcgagaggaaatacaactgctcagtgtgtggcaaggcgttcTTGAGGAGTAGCAACCTTAGTGCTCATATGCATATGCACAAGAAGTATGGCCACCTCCAGACGAGTTAG
- Protein Sequence
- MHPANCLLCHKCDQKFNKKRDLDSHMRIHHRQQYDCLKCSQTFPNNAALQNHRSNAHISTCNICFQTFSSDSKRLKHMKSEHVTDGVECGFCLKTLTTKQAFFRHAAQCNAKRKQSDTIVVDEHDKRQTVKVMRNNIACVLNMSTAIPFKFFLNRFRCFYCSKDFIDCDELKEHTITEHPYCDTKFKSMKLKNRYEGMSIKVDTSNLACKLCVEAFQSLEALIDHLTDEHKASYDKSIENNLQPFSLVKDNFLCPLCGEVYRYFGMLLKHVSVEHTDNNMICVYCGQPFRTNPSLRAHVLRRHTGVRYKCERCDLGFTSNSALISHMGRAHSSKVVKCTQCPEMFATPYSMQKHLIVAHGTGHKCTYCLKVFTKNSSMINHVRRFHLKEKNVQCSVCSERFFDSQRLKVHMVKHIGERNFHCDVCDIKVLNRFDGYIYSENNLFSDEYQPGPYTSCTAERRRINMKILFNHTTVMPFKWRGRFLCFYCTESYVDYPEFRKHTLAHGLCTTKDYALRVIKGNHIEIKIDVSEIACDICNEEFEQFPVVIDHLIGRHGLEYDKDVDIPFQEYRLVDGKCLLCEERFTYFGHLVNHVNSTHPQNKFICDECALPFNKKRDLACHLRNYHRQGGYPCDQCVQVFETKLSLRTHINNAHFRQCSNCGLRFGTLALLQKHVQLDHPEVCELKCSYCMKVFHSSQGVKLHMSKCKVKMLSEVDLPVDNSFPEETIIVPTVNKKNQNIIQVRINIHCVLNLSTAVPFKFMAKFSCFYCSKKFIEFDELKQHTSSEHPVCDLKSKALKNCKGERISVKIDISSLSCKICRTPMDDLDTLIDHIICEHKANYDKTVKGCLEPFRILKDNIPCPLCLEHFRYFTTLLKHLNSEHNNNNRICDFCGRSFKNVSNLKVHMSYNHTGVCECNICGLKYKNQWCLARHRAKTHDAKDFKCPKCSERFQSEYRKQKHLIKVHDIGHKCSYCGKMFTRNSFKKDHIRRTHLKEKNVTCSVCSEKFFDNHLLRMHMVKHKGERKYNCSVCGKAFLRSSNLSAHMHMHKKYGHLQTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -