Basic Information

Gene Symbol
-
Assembly
GCA_945859695.1
Location
CAMAOO010000024.1:1894080-1912619[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.72 8.8e+02 0.2 0.1 19 26 423 430 417 435 0.88
2 18 8.2 1e+04 -3.2 0.0 18 27 450 459 445 461 0.79
3 18 0.027 32 4.7 1.4 17 30 490 504 480 513 0.74
4 18 0.0011 1.3 9.2 1.9 6 38 508 540 505 541 0.74
5 18 0.053 65 3.8 3.8 5 34 535 560 533 575 0.81
6 18 0.0026 3.2 8.0 4.4 18 38 575 596 563 599 0.89
7 18 0.012 14 5.9 0.4 16 32 601 618 597 630 0.78
8 18 0.017 21 5.4 2.4 6 33 616 647 614 653 0.71
9 18 0.017 20 5.4 3.3 5 38 647 680 644 681 0.77
10 18 0.003 3.7 7.8 0.2 5 33 675 708 672 709 0.78
11 18 0.051 62 3.8 4.7 13 38 725 751 718 757 0.80
12 18 0.045 55 4.0 4.9 13 38 753 779 746 785 0.81
13 18 0.03 37 4.6 1.1 14 30 782 799 775 809 0.71
14 18 0.017 21 5.4 5.5 6 30 803 826 799 835 0.72
15 18 0.011 14 5.9 4.1 5 38 829 862 825 866 0.83
16 18 0.018 22 5.3 3.0 6 33 858 885 857 891 0.76
17 18 0.00016 0.2 11.9 4.7 6 38 886 918 885 919 0.83
18 18 0.0053 6.5 7.0 0.5 16 38 923 946 919 946 0.85

Sequence Information

Coding Sequence
ATGAATCCGGAGCACCTCAATATCAGTACGGGTGGTGGCCAACCTCCTGGAAGTTCAGAGGCACAGGGCCAGAGAATTCAATCGGTGCAGCAACAACAGAACAGTTTAACTCCCACAACATCTGCGACTGATTTGCGAGTAAATTCTGCTGCTGTGAACGTCGCTTTGTCTAGCGTTGCTAAATACTGGGTGTTTACAAATTTATTTCCTGGACCGATACCACAAGTTTCAGTGTACGGATTGCCGACTGGGGCGAGAATTGAAAATGGAAAACCTGTCCAGGAATTAGGGCAGACTCATGCAAGTATATTAAATGGCGACCCCAACATAATTCTTGGGCACCATGGGGGGCAATCGCAGGTCACCGTTTCTGCGGCCGGTACCCAACAAATTCCTGTATCACAGATCATTGCTACACAGTCTGGACATACACATGAAACACTTGTGGGGCACACTGGCGACCTGCAGGCGGGCACGCAAGTAGCGGTGAGCTCATCACAGCCCTCGCATCACCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGTCACCACTCCCAGCATCATCTAATGCAGCAACAGCTATTAGCAGCTTCGCGCCAAGAACATGGTAACCAGCAGATCCAATTAACGGTGAGCGAGGACGGCATAGTAACGGTCGTGGAGCCAGGCGGGGGCAAGCTGGTGGATAAGGATGACTTGCACGATGCCATTAAGATGCCCTCGGACCACACGCTCACTGTCCACCAGCTGCAGCAAATTGTGGGACAACAGGTAATAGACAGCGTAGTGCGCATAGAGCAAGCGACGGGCGAGCCGGCGAACATTCTCGTGACGCAGAACCCGGACGGCACCACCTCCATCGAGGCCAGCGCTGGCGACTCGCACATCGTCAAGGACGAGAAGAACGGTGGCAAGATCGAAACTGCTCAATTCGCCATACCCGCTGAGATAAAGGATATTAAAGGCATCGACTTAAAGAGTGTAGCATCGATGGGAATGGAGGGAGCGGTCGTGAAGATATCGGCCGGTGCAGCCGACCACGATCTCCACGCCATGTACAAAGTGAACGTTGAGGACCTCTCGCAACTGCTGGCCTACCACGAGGTGTTCGGGAAACTCAACTCTGAGGGCCAGCAGCAACAACCGCAACAACAGCAAGCCAAGGTAATCACTGAAATAGAAGTGGAAGTACCAGGGCCGAGTGCTGTGATGTCCGAAGCTGAATCCTCGCCCGGTCATCACTCCTGTGATATTTGCGGGAAGATTTTCCAATTCCGATATCAACTTATTGTTCATAGACGGTACCACGGTGAGAGTAAACCTTTTACGTGTCAAGTTTGCGGCTCCGCGTTTGCCAACCCTGTAGAGCTATCGCGACACGGGAAATGTCATCTTGCTGGGGACCCGGCGGAGCGAGTTGCCAAGAGATTAACTCAAGACAAGCCATATGCATGCACTACTTGCCACAAAACATTCTCTCGGAAAGAGCATCTGGATAACCATGTCCGCAGCCATACCGGAGAAACGCCATACAGATGTGAGTTCTGCGGCAAGACGTTCACGCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGGAAGGAGCATTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCACACCATTGCCAAATATGCGGCAAGAAGTTTACTAGGAAGGAGCATTTAGTGAATCATATGAGATCCCACACAAACGATACTCCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAACCACATACTGTGGCATACGGGTGAAACTCCCCACCGCTGCGACTTTTGTTCCAAGACTTTTACACGCAAAGAGCACCTGTTGAACCATGTGCGCCAACACACAGGCGAGTCTCCCCACCGCTGCAACTTCTGCTCGAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGCCAACACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCGTTCACCAGGAAAGACCACCTAGGTTTTTGGCTTGGAGTGTCTAACCCAGCGTGTAACAATGTTCCAGTGAATCACGTGAGGCAGCACACGGGCGAGTCTCCGCACAAGTGTTCGTTCTGCACTAAGTCTTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGCAACACACGGGCGAGTCACCTCATCGGTGCACCTTCTGTGCAAAGTCCTTCACCAGGAAGGAACACCTCACTAACCATATCCGACAGCACACGGGTGAAACGCCACACAAGTGCATGTTCTGCCCGCGCGCGTTCTCTCGCAAGGAGCACCTCAACAACCACGTGCGCCAACACACCGGTGCCACCCACAGCTGCTCCTACTGCAACAAGACCTTCTCGAGGAAGGAACATCTTAACAATCACGTCAGGCAACATACCGGCGAGACGCCCTTCAAGTGCACGTTCTGTTCGAAGTCATTCTCTCGCAAAGAGCATCTCACGAACCACGTGCACCAACACACGGGAGAGACTCCACACAAGTGTCCGCTCTGCACTAAAACATTCTCCAGGAAGGAACACTTGACCAACCATGTCAGGATCCACACTGGCGATTCCCCCCACCGCTGCGAGTACTGCCAGAAAACGTTCACTCGTAAGGAGCATCTCACGAACCATCTCAAGCAGCATACGGGTGACTCCACGAATACCTGCAAGATATGCGCCAAGCCGTTTACCAGAAAGGAATATCTTGTCACCCATATGAGATCTCACAGTTGCGGCGAGCGTCCATTCAGCTGTGGGGAGTGTGGAAAATCGTTCCCGCTAAAGGGGAACCTGCTTTTCCACGAGCGCTCGCACAATAAAGCCAACGCAGGCGCGAGGCCCTACAGATGTGAAGTTTGTTCCAAGGACTTTATGTGTAAAGGACACCTAGTCTCTCATAGACGAACACACGCCGAGGCAGGTGAGCCTGCAACCAACACTGAAACACCCGCCGAAACGGAGGATTGCAACGATTGTACCAACAAATGCATCAAGAGCGAGGTCGAGCGACCGGAGAGAAAGCCAGATGTCTTGAGGACTACTACAGAGAACAGGCCAGCTGAAAGCAATGCGGCACAAAATCAGACACAAACGAATACTACTGTGATGCAAATAACAAGCCAACAAGTCCGCGGCGCCACGACTTCCAATGCGGCGGTGCCCGCTGGTACCTTCACACACGCCGGCGCCACGCTCGCCATACACCCCGTCACTGTCAACTACTAA
Protein Sequence
MNPEHLNISTGGGQPPGSSEAQGQRIQSVQQQQNSLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQELGQTHASILNGDPNIILGHHGGQSQVTVSAAGTQQIPVSQIIATQSGHTHETLVGHTGDLQAGTQVAVSSSQPSHHQVPNNRVEFVQHHNIDMGHHSQHHLMQQQLLAASRQEHGNQQIQLTVSEDGIVTVVEPGGGKLVDKDDLHDAIKMPSDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTQNPDGTTSIEASAGDSHIVKDEKNGGKIETAQFAIPAEIKDIKGIDLKSVASMGMEGAVVKISAGAADHDLHAMYKVNVEDLSQLLAYHEVFGKLNSEGQQQQPQQQQAKVITEIEVEVPGPSAVMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERVAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCGKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKFTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGFWLGVSNPACNNVPVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCMFCPRAFSRKEHLNNHVRQHTGATHSCSYCNKTFSRKEHLNNHVRQHTGETPFKCTFCSKSFSRKEHLTNHVHQHTGETPHKCPLCTKTFSRKEHLTNHVRIHTGDSPHRCEYCQKTFTRKEHLTNHLKQHTGDSTNTCKICAKPFTRKEYLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKANAGARPYRCEVCSKDFMCKGHLVSHRRTHAEAGEPATNTETPAETEDCNDCTNKCIKSEVERPERKPDVLRTTTENRPAESNAAQNQTQTNTTVMQITSQQVRGATTSNAAVPAGTFTHAGATLAIHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01030446;
90% Identity
iTF_00468340;
80% Identity
iTF_00468340;