Basic Information

Gene Symbol
-
Assembly
GCA_945859695.1
Location
CAMAOO010000066.1:1226815-1238376[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-15 9.4e-12 45.3 0.1 3 89 244 317 242 317 0.89

Sequence Information

Coding Sequence
atgtttattgttgGTGTGGAGTGCGAACTCTTCACCCGCCCAAGTGCGCTCCCCGCCCCCGTCGCCGCCCTACACCAATTGCGCAAGCTGCTCGGATTTATTCTTACTCAAGACGAGGTGCTAGCGATTAACGACAAGGTGGTACTGAGGGCTGATGACCTGCTGAGCTGGGTGTGCGACGGCGGCGGCTGGCGCTGGGGGCGGAGGGCCGTGTGGCGCGGCGCCTGCGCCCCCCCGCCCGAGGCGCCGCCCTCGGCGCCGTTGCACCACACCAGGCTGGACTTCACCGACGTGGACAAGGAGAAGAGCGCCATCGAAGAGGACGCCGACTGTCCAGGTGTAGTGGTGTTCTCGTACCCTCGCTACTGCCGCTACCGGGCGCTGGCCTCCCGCCTCGAGGGCATCCAGGCTAACTGGCTGCGGGACTCCCTGGTCGCCGCGCTCGGGGGGTACGCAGCGCCCACCAAGAACACCAGGATATTGTACTGTAAGGACACGTTCGAGTACCCGGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTCGCGCCGCGCCTCAAGGGCCGCCCCCGAGgcaggcgccgccgcgcgccgatacacgcgctctcgcccgcgcgctccagcgacaccgacactgacgcaccgGCGACCCCCCGGCGCATGTCCCTCCGCCCCCCGCCGGAGTCCCCCGAGGAGGAGGACGAGGACGACTGCTACTCGGCCGAGGACCGCTCCTTCCTGCGCAGCTTGAAGCAGTTCTACAAGGACCGCAAGGAGACTTTCAAGATGGGGCACTCGTTTAAAGATTTGTCCCTGCGTGCGCTATACAGTCTGGTGTCCTCTCGTGGCGGGTACGAGGCCGTGAGCCGCCACAAGCTATGGCGCACCCTCTCCCACGACCAGCCCGCCAGGATACGGAGACACTACGAGAGATACCTCCTTCCCTACGAGAACTACGAGCGGCGTAACGGCGCTTCAAAGTTGAACGGCAAAGTGTCCGCCGAGCCTCACACGGTGGCTACCATAGAGGTGCTAGACTCACCGCGCAGAGACACTGACACACCCAAAATCCTGCGCACCCCCTCGCCCAAGACCGTAGACAGTGAGACCGGCGAGAGTAAGATGGAGTTCATCTCGAAGCCGGCCGAAGAACTGAACAGGGAGTTCCTCGACTCCCTCCCCAAAGACGAGGCGAGACCCCCCCAGAAGTTGGCTGTGCCCAAGATGATGAGCCTCCTCGACGACAGCAAGGCGCTCGTCAGCGATTTGTCGATGAAAGTCGGCGAACATGTCACCAGGGACAGGATTGGCTATTTGAGCGAAGTGGCGCGCAAGTTGGAGTTAGGTAAAACAGAGTCTACATTCCTAAAAGACATGGCGACGAGTGAAAAGGCGCAGACAGCCCCAGTCAACGGGCACACGGCCCCACCGGCTCCTACCGACTTGgccggccgcccccccccgggccgcagctcactgcgcgccgtgcgcgtcaaacctacgcgctcctcgcacggacagccacCGGGCCCGCCCCCCTCCGCCTCCCCGCCGTCCATCAACAACTTTGGCATCCACCACCCGCCGCCGCCGACGCATAGCGACGATGAAATTGTCGAGGTTCCTTACAAACCAAAAACTCCAGAGATCATAGACCTAGACGAATACCCCGAGAGTCCGCAGCTGAAGAAGAAGAAGCTAGAAAAATTGGACATCCTCAAAGAGCGAGGGCTCGAAGTCACTGCCCTCCCCACCACCTGGAGCCAGCCCATGGCGATCACCAATCCCATAGTCGCCCCGGCGCCCATCATGCTTAACCCGGTCGTGCAACACCAAATAATGACGCAGGCGCAGCTCTTCCAAATGTACAATATGATACCCCCCAATTTCCCCAACGGCCTCCAACCCCCCAAAGTCATCCAAGGCACCGGCATATTCGGGTCTACGGGTCCGGAGAAAACTGTATATGGCAACCCTAAAGACCCCTTTATGCCACCGCCGCACATTCTGCACGGAGCCCCCGTGAAGCCTAAAAACGTAAGTGTCCCCCCCACCCCTCCCCTAGACATCCTCGACCTGACGTGTAAGGCCACCCTCCCAGCCGTGGAAATCGTTCGCCTACCCTCGCCGTCGAAGAGCGCCGCCCAGAACCTCACGAAGAACTACTCCGTGGTGGATGGTAAGGCAGTGGTGGGGTCCCATTTAGAAATTACCTTAGTCAACAAAACACCCAATAAAAAGCCGCAGAAGCGATCCTCCAATGGCAAGTTCGTATCGGCCAAGACCCCCACCCCTCCCAAAGATAAACCGTACTGCCCGTCCCCGTCGGGGGCCCAGAAGAAGTCCTCCATAGTCGTCCCCCACTACCAGATCAATAGGGACGAGACCTCTCCCACCAGTTCCACGGGGTCTTCTAATAGCCAAAGTAATTTACACACGTACAAACAGGGGAATTTGATGCATATGATGGACTTGCAGAAGGGTCCCCTGCCCGGACCCTTTGTGGACCCTTACGCGGCGCTGTACTCCAGCCTCGCAGGGCAGATGGATCAGCGGCAATTGGCCGTGTATAGGGACTTCATGGCTAACCAGTTTAGGGGGTACGGTGGTCTGCTTAACCTAGGTGTCACCACGCCGACAACGAAGAACTGA
Protein Sequence
MFIVGVECELFTRPSALPAPVAALHQLRKLLGFILTQDEVLAINDKVVLRADDLLSWVCDGGGWRWGRRAVWRGACAPPPEAPPSAPLHHTRLDFTDVDKEKSAIEEDADCPGVVVFSYPRYCRYRALASRLEGIQANWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAPIHALSPARSSDTDTDAPATPRRMSLRPPPESPEEEDEDDCYSAEDRSFLRSLKQFYKDRKETFKMGHSFKDLSLRALYSLVSSRGGYEAVSRHKLWRTLSHDQPARIRRHYERYLLPYENYERRNGASKLNGKVSAEPHTVATIEVLDSPRRDTDTPKILRTPSPKTVDSETGESKMEFISKPAEELNREFLDSLPKDEARPPQKLAVPKMMSLLDDSKALVSDLSMKVGEHVTRDRIGYLSEVARKLELGKTESTFLKDMATSEKAQTAPVNGHTAPPAPTDLAGRPPPGRSSLRAVRVKPTRSSHGQPPGPPPSASPPSINNFGIHHPPPPTHSDDEIVEVPYKPKTPEIIDLDEYPESPQLKKKKLEKLDILKERGLEVTALPTTWSQPMAITNPIVAPAPIMLNPVVQHQIMTQAQLFQMYNMIPPNFPNGLQPPKVIQGTGIFGSTGPEKTVYGNPKDPFMPPPHILHGAPVKPKNVSVPPTPPLDILDLTCKATLPAVEIVRLPSPSKSAAQNLTKNYSVVDGKAVVGSHLEITLVNKTPNKKPQKRSSNGKFVSAKTPTPPKDKPYCPSPSGAQKKSSIVVPHYQINRDETSPTSSTGSSNSQSNLHTYKQGNLMHMMDLQKGPLPGPFVDPYAALYSSLAGQMDQRQLAVYRDFMANQFRGYGGLLNLGVTTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-