Darc003021.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drepana arcuata
Gene Symbol
nfxl1
Assembly
GCA_016069955.1
Location
JACCPG010000284.1:4566-7034[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1 2.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.0052 1.2e+02 3.2 0.3 4 10 169 175 168 176 0.97
3 20 9.7e-07 0.023 15.1 18.4 3 19 186 202 185 202 0.95
4 20 1 2.4e+04 -4.6 2.5 9 13 208 212 207 213 0.79
5 20 1.7e-08 0.0004 20.7 12.2 3 19 239 255 237 255 0.92
6 20 0.38 9.1e+03 -2.8 2.2 6 10 280 284 279 284 0.83
7 20 2.7e-06 0.064 13.7 13.1 1 19 290 308 290 308 0.98
8 20 1.6e-07 0.0038 17.6 18.0 4 19 346 361 344 361 0.93
9 20 0.5 1.2e+04 -3.1 1.8 5 10 384 389 384 389 0.93
10 20 6.6e-07 0.016 15.6 15.7 1 18 395 412 395 413 0.97
11 20 8.5e-11 2e-06 28.1 11.7 1 19 422 440 422 440 0.98
12 20 9.9e-05 2.4 8.7 7.9 9 19 488 498 486 498 0.90
13 20 0.0016 38 4.9 8.7 1 12 508 518 508 518 0.96
14 20 0.17 4e+03 -1.6 2.9 14 18 547 551 547 552 0.84
15 20 0.33 8e+03 -2.6 2.5 8 16 568 579 567 583 0.65
16 20 2.8e-05 0.68 10.4 3.3 1 11 588 598 588 599 0.97
17 20 0.41 9.8e+03 -2.9 1.9 15 18 613 616 611 617 0.62
18 20 1.1e-05 0.27 11.7 14.2 1 18 628 645 628 646 0.87
19 20 1 2.4e+04 -6.5 3.4 9 13 652 656 652 656 0.71
20 20 3e-06 0.073 13.5 13.2 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGTCGCGGCGTTACAAGGATGCAGCTGCAAAATTGCAGCAAAATGTACAGAAACACTTAAAAGAGATGAAGGAAATATCTTCGTCAGAAGACGAGGAAGCGTGCGATGCAAACTTGCTGGAAGGAGTTTTCCAAAGCTACTGGCGAGGCGGCGGAGATACTCAAATGCTCAACAGGACCAAGAACCTTGTGGAAGAAGCCATCAGCGGGCGCTCTGTAACCTGCCTCATTTGTATAGGCTCCATCAAACGGGCCGATGCGATATGGACTTGTGAACATTGCTACTCCTACTTTCACCTATCTTGCATACAGAAATGGTCCAATGACAGCATAAGCTTGAGAAGCGAAGAAAACCATGGCCCAATTATGGTAGTAGCGCCTAAAAAGATTGAGTGGTGCTGTCCGAAGTGTCGACAGTCATACTGTAAAGAAGAGATACCGCGCAAGTATCGCTGTTTTTGTGGAAACACTGACGATCCACCATACCACCCATGGTTGATACCTCACACTTGTGGGGAGGTGTGTGGGAAACTGCTTTCCAAGGGTGACAGCTGCCACCACAAGTGCCTCTTGCTGTGCCACCCTGGGCCTTGTCCTCCATGCCCACAGACTGTGAATGGCGTCTGCCACTGTGGTAAGGAACGCAAGCGAGTACGATGTAGTGCAGCCAAGTGGACCTGTGGGCAACAATGTAAAAAAACTCTGCTTTGCAAGACCCACAAATGTGAAGATGTGTGTCATGAAGGAGACTGTTCTCCCTGCAGCTACACAAGCCTGCAGGCATGCCAATGTGGTGCTGAGAGGATGAAGAGGGCTTGTAATGACCCCACATGGCAATGCCAGAAGCCATGCAACAAACCATTCTCATGTGGATACCACAATTGTGAGAAAATATGTCATTCAAATGGCTGTGGCACTTGTCCTAACTCTGGTATGAGCTCTTGTCCATGTGGGGCTAACCAACGCTTTGTACAGTGTCCGGACGCCATGGAAACATGCCTGGGTACTTGCAGTAAACCACACATGGACTGCGACCATACCTGCCCAGAGAAATGCCACAAAGGGCCATGTCCTCCGTGCCAGGTACTAATACAAAAGAAATGTGTATGCTTAAGTCATACAAGATCATTACCATGCAGTAAGGAGTTCAAATGTGAATCAAAATGCAGGGGCATAAGGCCTTGTGGCAAGCACTCGTGTGCCAGAAAATGTTGCAATGGGATGTGCCCCCCATGTGAGAAGATTTGTGACAAACCTCTGCAGTGTGGCCGCCACAAGTGTGCTAGTATATGCCACCGTGGACCCTGTTACCCTTGTTCCAGGGAATCTAAGATCACTTGTAGATGCAAGGAGACATATATAACAGTTCCATGTGGCAGAGAGAAACATGTCAAACCTCCAAAATGCAGTATACCATGCAAAGTTAAATATAAATGTGGACATATGGATGAAAATAAGCATCCTTGCCACTTTGGCGATTGTCCACCTTGCAAAGCTATTTGCTACAAAGCATATCCCATCTGTGGGCATGAATGCAAAGCAAAGTGTCATGAATTTGTTGCAGTAGTATTCAAGCAAGTAGAAAAGCCTGCAACACCGTGGGACATACAGCCTCCCAAGACGAAAATAATGACACTTGCATGTCCACCTTGCGAAGCACCCGTCACTGTTATATGTTTTGGGGAACACGAGACATATAGTCAGCCATGTCACATGGCTAAGCGACAGCCATGTGGCAGAGAGTGTGGACGCCCATTGACCTGTAGCAATCATAAATGTGCATTACTATGCCATCTACACAAAGCTGATCTGGAATATTCTAATGTACCGCATACTTGTAAGCCATGTGACAGAGAGTGCTTAGTAGATCGTCCAGAAAAGTGTTCACATAAGTGTGCTCTCAAAGCTTGCCACCCTGGGCCATGCCCACCTTGTGATGTTCTGGAGAGGATTCCCTGCCATTGTGGTCTAACTGAACTTTACTTACGTTGTAGAGAATTTTGTGCAGCTACAGAAGAAATGCTATCGTGTAAACAGCAGTGCCCTAAAAACCTAGAATGTGGTCACCGTTGCCGAAACAGTTGCCATTCTGGGCCATGTGGAAATCAAGTGTGCACCAAAAAGACAAAGACCTACTGTCCTTGCGGTAACCTAAAGAAAGACACTCCTTGCAATTTAGCTAAGACAGGGGACATTCAAGTTATATGTGATAGCAGTTGTGAAGCAAAGAAACTTGCTATGAAATTGGACAAAGAGGCAGAAGAGAAGAGATTAAAAGAGTTGGAAGAAGAAAGGAATAAAAAAGAACTAGCTGAATACGAATGGAAGCTTAGTGGCAAAAAGAAAAAATATAAAGAGAAGAAAGTTCAAGTGGCAAGGGATGAGAGGAGCTTACTGCAAAGATACTCCCTCATCATTATGTCTTTCTCTGTTGTCCTAACTGCTTCCATTTATTATATACTTAAATAA
Protein Sequence
MSRRYKDAAAKLQQNVQKHLKEMKEISSSEDEEACDANLLEGVFQSYWRGGGDTQMLNRTKNLVEEAISGRSVTCLICIGSIKRADAIWTCEHCYSYFHLSCIQKWSNDSISLRSEENHGPIMVVAPKKIEWCCPKCRQSYCKEEIPRKYRCFCGNTDDPPYHPWLIPHTCGEVCGKLLSKGDSCHHKCLLLCHPGPCPPCPQTVNGVCHCGKERKRVRCSAAKWTCGQQCKKTLLCKTHKCEDVCHEGDCSPCSYTSLQACQCGAERMKRACNDPTWQCQKPCNKPFSCGYHNCEKICHSNGCGTCPNSGMSSCPCGANQRFVQCPDAMETCLGTCSKPHMDCDHTCPEKCHKGPCPPCQVLIQKKCVCLSHTRSLPCSKEFKCESKCRGIRPCGKHSCARKCCNGMCPPCEKICDKPLQCGRHKCASICHRGPCYPCSRESKITCRCKETYITVPCGREKHVKPPKCSIPCKVKYKCGHMDENKHPCHFGDCPPCKAICYKAYPICGHECKAKCHEFVAVVFKQVEKPATPWDIQPPKTKIMTLACPPCEAPVTVICFGEHETYSQPCHMAKRQPCGRECGRPLTCSNHKCALLCHLHKADLEYSNVPHTCKPCDRECLVDRPEKCSHKCALKACHPGPCPPCDVLERIPCHCGLTELYLRCREFCAATEEMLSCKQQCPKNLECGHRCRNSCHSGPCGNQVCTKKTKTYCPCGNLKKDTPCNLAKTGDIQVICDSSCEAKKLAMKLDKEAEEKRLKELEEERNKKELAEYEWKLSGKKKKYKEKKVQVARDERSLLQRYSLIIMSFSVVLTASIYYILK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00724435;
90% Identity
iTF_00468656;
80% Identity
-