Basic Information

Insect: Drepana arcuata
Gene Symbol: -
Assembly: GCA_016069955.1
Location: JACCPG010003338.1:89925-99086[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00078 0.067 14.1 4.5 1 23 269 291 269 291 0.98

2 12 0.04 3.4 8.7 3.5 1 23 299 322 299 322 0.96

3 12 2.3 2e+02 3.2 1.0 1 23 326 349 326 349 0.92

4 12 8.7e-05 0.0074 17.1 2.2 1 23 436 458 436 458 0.99

5 12 0.024 2 9.4 0.9 2 23 467 489 466 489 0.96

6 12 1.9 1.6e+02 3.5 4.1 1 23 493 515 493 515 0.97

7 12 9.2e-05 0.0079 17.0 2.9 1 23 520 543 520 543 0.97

8 12 0.08 6.8 7.8 1.3 3 23 549 570 547 570 0.93

9 12 0.26 22 6.1 0.4 3 23 618 639 617 639 0.95

10 12 2.4e-06 0.00021 22.0 1.3 1 23 648 670 648 670 0.98

11 12 0.055 4.7 8.3 4.3 1 23 676 698 676 698 0.92

12 12 1e-05 0.00089 20.0 2.5 1 23 704 727 704 727 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00078	0.067	14.1	4.5	1	23	269	291	269	291	0.98
2	12	0.04	3.4	8.7	3.5	1	23	299	322	299	322	0.96
3	12	2.3	2e+02	3.2	1.0	1	23	326	349	326	349	0.92
4	12	8.7e-05	0.0074	17.1	2.2	1	23	436	458	436	458	0.99
5	12	0.024	2	9.4	0.9	2	23	467	489	466	489	0.96
6	12	1.9	1.6e+02	3.5	4.1	1	23	493	515	493	515	0.97
7	12	9.2e-05	0.0079	17.0	2.9	1	23	520	543	520	543	0.97
8	12	0.08	6.8	7.8	1.3	3	23	549	570	547	570	0.93
9	12	0.26	22	6.1	0.4	3	23	618	639	617	639	0.95
10	12	2.4e-06	0.00021	22.0	1.3	1	23	648	670	648	670	0.98
11	12	0.055	4.7	8.3	4.3	1	23	676	698	676	698	0.92
12	12	1e-05	0.00089	20.0	2.5	1	23	704	727	704	727	0.98

Sequence Information

Coding Sequence: ATGTTTCAATTAAGAGCCTGCGCTGTGTGTTTTGCCACGGATAAAAAATTATTACATATCGACAAAGCTCGCTTACGAAATGATTTAAATTGGATATCGGGAAATGAGAATTACCCAGCAGATGGAATGCCAGGATACTTGTGCGTAATGTGTACTGCATATTTAAGGAACTGCAAGAAGTTTCGTGATAAATGCCAGCGTGCACATTACACCTTATTGGAACTGTTACGGAGGAATAACCAGATTAAATTGGCGCATTTGAAAGCTGTTGACTGTACGAAGTTAGGTGTGGCACATAATTTATCATACTTAGACTTGAATACCCGACACTATGAAGAAGTAAAATACCAATGGGTCCATTTCAATCATACCGGAGTCAAACAGCAAGATTGTATACCTATTGCTTTCTGTGATATTGCAGAGGCATCATATGAAGTGCCTGCAAAAAAACCCAAACAAATCATGACCGTTGATGACGATGATAACAATGTTAAACTAGAAAAGCAATTTGAAAGCCTCGGAGAAAGTATAGAGTGTCATGACACAGTAGTTAAAGAGGAGGCCTTAGACCACATGGGTGTAGATTCTGAAAAAGACTTTGATGATAATTTTTTTGATGGCAACTGTTCAATAATCACTAATAATCAAGACTCATATGAGATTCCAATTGAAGTCAATGAAAAGGATACATTAGAGCATGCAGACGGGACAGACAATGAGTTTGAGTATGCTACTCTTGTGCCAATGTCTTTTGCAGAGGCTAAGGCTGCATTGGAGGTGTCAAAAATGTTCACCAAAGGAGAGCATAAGTGTGATGTGTGCAATAGAGGGTACTGTAATGAGTCCCGTCTGAATATACATCGGCGTATGCATGATAAGTATGTAAGTGGCTTTTTCGTCTGCGTACATTGTAACTATTACTACAAGACTGATTTCTTATTACAAACTCACTTGAAGGAGAAACACATGTACAAATATTTGTGTAGGAAATGTCCTGAAGTCAGTTTTTCTCGTACAACAGCGAAACAGCACTACATACGTCAGCATATGACAAATGACACAAATAAGAATGACGATTGGCAGAAGCGCCGCCCTAAATGGCTCTACGCCAGAGGGGGCAAGCGTGTGAAGGGATCCAAGCCTAAGGCAGGAAGGAAGGAAGACCATCATCGCACACCAGTCCGCACAGGGAAGCCATCAGCCAAGACGCCCGAAGACTTCCCAATAGAGTCCCCGGTGTCTCAAGAAGACCAGTACAGACTGATATTGGAGAGAAAGAACACAAAGAATTACTTGGAATCCGATTACAAGTGTCAGTATTGCTACAAGGGATTTCGGGAAGAGGTCGCGTTTAACAATCACATGAAGAAACATAACCCGGAGATCTCCGGTCCCTCCCAATGCGACATGTGCAAACTGTACTTCAAAAATCCTAGGAAGGTGTACAAACACGTGACCACAGCACACATCTTCAAATACTCCTGTCGAGTCTGCAAGTTCTTCTGTTTCAATAAGGATCAAGCGTCGGCACATTATAAGTGGCACAACAATGTCACATACACCTGCCCTCATTGCAACAAAGTGTTCAAGAAGATATCGTCTCAGCTGACTCACATTAGACTGAAGCACCCGTCGTCGTCGATATGCAACCTGTGCGGCCACAGCTTCGTCAGCGAGGCGGGGCTGGCGTGTCACAAGAGGATTACCCATTCTGAAGAGTATGACTCTCCGAACACAGAGTGGCAACGCGCAAGTGATACTTCGGTATCTGGCAAGACATCGTCCGGCTGGCCGAGGCTGAAGCGTGGCCGCACTGAGATCCTGAACAACGGCGTCGCCACAGCCAATCACTGTGAAGTGTGTGGCAAGTTCCTAGTGAACGACGTGCAAGCACGGCAACACTACGAGACTGACCACCCCGGGGTCAATTACCTGAAGCGGTACATGTGCGACGTGTGTGGACACACTACTAAGCAATACGCGAACCTGATGGTACATATGCGCACGCACACCCGCGAGAAGCCCTACAGCTGCCCGCACTGCGACCGCAAGTTCAGCATGACATGCAGCAGGGATAGGCACCTCGTGGTCCACACGGGTGAGAAACGCTACCAATGTCAGCATTGCAGCCGACGCTTCACACAAAGCAGCGCCGTGAAACTCCACATACAAACCGTCCACCTCAAGATCCCCTACGCTCCCTGGGACAAGAAGACCAGGAAGCGACGCAAAGAGCTCGAAGGCGCAGCCACGGGCCCCATCAGCGTGGTCGATCCTGTCAATTGCCTACAGCCCCAGCATAAGCTGGTCTTGGACACGCAAGGCGACTACCTCAATGCATATATCACGGACAGTGATGAGTGA
Protein Sequence: MFQLRACAVCFATDKKLLHIDKARLRNDLNWISGNENYPADGMPGYLCVMCTAYLRNCKKFRDKCQRAHYTLLELLRRNNQIKLAHLKAVDCTKLGVAHNLSYLDLNTRHYEEVKYQWVHFNHTGVKQQDCIPIAFCDIAEASYEVPAKKPKQIMTVDDDDNNVKLEKQFESLGESIECHDTVVKEEALDHMGVDSEKDFDDNFFDGNCSIITNNQDSYEIPIEVNEKDTLEHADGTDNEFEYATLVPMSFAEAKAALEVSKMFTKGEHKCDVCNRGYCNESRLNIHRRMHDKYVSGFFVCVHCNYYYKTDFLLQTHLKEKHMYKYLCRKCPEVSFSRTTAKQHYIRQHMTNDTNKNDDWQKRRPKWLYARGGKRVKGSKPKAGRKEDHHRTPVRTGKPSAKTPEDFPIESPVSQEDQYRLILERKNTKNYLESDYKCQYCYKGFREEVAFNNHMKKHNPEISGPSQCDMCKLYFKNPRKVYKHVTTAHIFKYSCRVCKFFCFNKDQASAHYKWHNNVTYTCPHCNKVFKKISSQLTHIRLKHPSSSICNLCGHSFVSEAGLACHKRITHSEEYDSPNTEWQRASDTSVSGKTSSGWPRLKRGRTEILNNGVATANHCEVCGKFLVNDVQARQHYETDHPGVNYLKRYMCDVCGHTTKQYANLMVHMRTHTREKPYSCPHCDRKFSMTCSRDRHLVVHTGEKRYQCQHCSRRFTQSSAVKLHIQTVHLKIPYAPWDKKTRKRRKELEGAATGPISVVDPVNCLQPQHKLVLDTQGDYLNAYITDSDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00467695;
90% Identity: iTF_00468451; iTF_00467695;
80% Identity: -