Darc001657.1
Basic Information
- Insect
- Drepana arcuata
- Gene Symbol
- ZFY
- Assembly
- GCA_016069955.1
- Location
- JACCPG010006607.1:27201-31728[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0058 0.5 11.3 2.5 2 21 154 173 153 174 0.94 2 20 9 7.7e+02 1.3 0.1 3 23 182 202 181 202 0.90 3 20 4.7 4e+02 2.2 0.2 1 23 207 230 207 230 0.87 4 20 0.029 2.5 9.2 6.6 2 23 236 257 235 257 0.95 5 20 0.0099 0.85 10.6 2.8 2 21 261 280 260 281 0.94 6 20 0.0093 0.8 10.7 0.7 2 23 325 347 324 347 0.94 7 20 3.8 3.2e+02 2.5 0.4 3 23 355 374 354 374 0.87 8 20 0.00061 0.052 14.4 0.3 1 23 380 402 380 402 0.98 9 20 0.0026 0.22 12.5 0.9 1 23 408 431 408 431 0.96 10 20 0.0032 0.27 12.2 0.5 1 23 440 463 440 463 0.93 11 20 0.0051 0.43 11.5 5.3 1 23 473 495 473 495 0.98 12 20 1.5e-05 0.0013 19.5 0.7 2 21 606 625 605 625 0.95 13 20 0.56 48 5.1 0.3 3 20 659 676 657 680 0.86 14 20 0.00084 0.071 14.0 0.0 1 23 684 706 684 706 0.97 15 20 5.7 4.9e+02 1.9 5.2 1 19 709 727 709 730 0.94 16 20 0.0005 0.043 14.7 0.9 1 23 742 765 742 765 0.94 17 20 0.00018 0.016 16.1 1.8 1 23 771 793 771 793 0.97 18 20 2.5 2.1e+02 3.1 0.2 5 23 803 821 801 821 0.95 19 20 1.3 1.1e+02 3.9 0.6 1 23 827 850 827 850 0.90 20 20 0.0035 0.3 12.0 2.1 1 23 858 881 858 881 0.95
Sequence Information
- Coding Sequence
- ATGAGCCGGCAAGTTGATGTTAAAGCCTTAGTATCGCATATATTGCGTGGAGACGGCTCGGATAGATGTAGGATATGTATGGGCGATACTTCCGACGGCCAAGTGTATCTGGGAGATACCGTAATGATTGATGGTGATAAAGCTGTGACTCTATCTGAACTGCTAGAAACAATAACTGGAATCGAGGTGCAGATGGATGATGACCTGCCCGCAGGGCTTTGTTGCACCTGCTTCATGGCAGCCATGCATGCGGGCCACTTCCGAGACCAGTGCCGTAGAGCCAATGACCAATGGGTGACTACACTCAACCTCCTTAACACAATACCTGACCATAAACAAACAACAAAACTGTTTGTCATCTTAACAGAGGATAAAATTATATTCCTTGACAATCTGTTTGAAGAAAAACCAAAGGAAGTCCAAATAGTAAGGCAAGACGGTAATAAATGTCACTCATGCCAATGCCCCAGCTGCGGGAAGCAATTTCAGTATGCCCAACATTTGTACCAACATTTGAAAGAGTCTACGGACAACTTGAGAGCTTGTCATGTGTGCGCAGAGATCCTGACTAGAGACTTGTTGGTGGAACACTTGAAGGAGGTTCATAATAAGAACCCCTATGATTGTAAGAAATGTCCAGCTTTGCTTCAGACTTATGAGCAATATGAACTGCATTTAGTTAAGGCACATGCACCTGGAGCTTGCACTTGTGGAGACTGCGGACGCAGCTTCCAGTCCCACCATGGATACCATGCCCACCTCTCAGTGCATGCACCGAAAACATGTCCAGGATGTAACAAACTCTTCCGAAACCAAACCTGCTATATGCACCATGTGAAGATATGCTGCAACTTGGACTGCAAACAGCTAGACACTCATCAAACCAAACATAAAGTTACAGTTCTAGTGGAAAATAGGTCTAATAATAAGAAGATTAAGGTTGGAATGCGTGGTAGCGTACACAAGGAGTGTATTTGTGATTATTGTAAGAAAAAATTTGCAGGCAGGAAGTTTGTCGCAGCTCACATACAAATAGTCCATATGAAAAACACACACAAGCCCTGTGCTTACTGCGGGAAGCTCCTTGCAGCAGCTCATATGACCGAACACTTGAAGAAGCACGAGTTAAACGAGTCTTACACATGTGAAATGTGTGGTATTGTCCTAAAGACCCGGTTAGGTTACAAGCAACACATCCGCCTGCACACCGGAGAGAGACCTTACCCGTGTCAATACTGTGGACAAACATTCTCTGCCTCCTCGAGGAGGTCAGAACATGTGAGGAAGACGCACAACAATACAGAAATTGTATTGAAACATGCATGTGAACTGTGCCCTGCTAGGTTTCGGTTACCCTACAGGTTGAAGAAACATATGGTTTCAGTGCATGGTGATGGCAGCGAGCCTGGTCCCCACTTTGTGTGTACTGTGTGTCAGGAGAAGTTCAGCAGCTGTAGAGGTCTTCTGCATCACAGCAGGAAGCATCAGTCTGCAGTGGAGGAGGAACCAGCCCTGCCCCGAGGGGTGTGCAGAACATGCTTCGATGACACCCTAACAGCGTTCCACTTTCGCAAGCTATGCGGAGTCTCTGCCCTTCTCTGGCAGGATACCACGAGCTACCTGGAGACATTACAGGAGCCCAAAAAAGATGACAAAGCCTTTTTCGTCTTCTACAACGACAAAGAGCAAGCCGTCGTCGCAGATCAGAGAAGCCGCGTGTTCTCCAAACAGGAAGCTCTAGATAAACTAAACGGCGAGTTCCTCCTTAAGACTAGGAAACCAGTGAGGGTTAAAAGAAGAAAGGTGATCCCATGCACGTGTCCTGATTGTGGCAAAAGATTTATGTCAGCCGAGCTCCTAAACAAACATCTCAGATGCAGTACGAAAAGGGCTTGCAATATTTGCGGTACAGTCAAATCCAAAAAGCGTTTGGCCAAACACTTTGCGCTGGTCCACGACGTGCACCTCGTGAACTGTACCAAATGCAACGAAAATTTCGAAAATGATGAGCTCATGCTCCAGCACTATGTGGACACGCACGAAACGAGGTACGCCTGCGGCATCTGTAGCCAGGGGTTCGTCAATGAGCGAGCCTTGTCCGCGCATATGTATTCACACAACACGTTCTACTGCGGATCTTGCAATTCGAGCTTCGAGAACCGCAAATGTTATAAACACCACGAGTCCCAGTGCAAGAAAGTAGCTAGACAAGTGCTCAACCTATTCGCCTGTGACTATTGCGGTGTCACTTACAACAAGAAGCCCTCTTTGAAAATACACATCATCCACAAGCATTTAAATGTTCTGCCCTTCATTTGTCAAACTTGCGGTAAACGGACGTCGACCATTGGTCATTTGAGATCTCATGAGATGACGCACAAGATCAACAGGAACGTCTACGAGTGCTATTGTGGCGCCAAGTTGCGTACAGAGTTGGGCTTTGAACTCCATCAGCGAATTCACAGCGGCGAGAAGCCGTTTGAGTGCGAGGAGTGTGGAGATAGATTCCTGTCCTCCTCTCGCCGGTTGGACCATATCAAACGGAGGCATAGGGGCAATGAAGGCATGCCGTACGCTTGTGAGAAGTGTTCGTCTAGATTTATAAGACCGTGTGAACTGAAGAAACATTATCTGAATGTTCATGGCTCTGTGGTCGAGGTTGTGCCTTTTCGTGGACGAGTTTAA
- Protein Sequence
- MSRQVDVKALVSHILRGDGSDRCRICMGDTSDGQVYLGDTVMIDGDKAVTLSELLETITGIEVQMDDDLPAGLCCTCFMAAMHAGHFRDQCRRANDQWVTTLNLLNTIPDHKQTTKLFVILTEDKIIFLDNLFEEKPKEVQIVRQDGNKCHSCQCPSCGKQFQYAQHLYQHLKESTDNLRACHVCAEILTRDLLVEHLKEVHNKNPYDCKKCPALLQTYEQYELHLVKAHAPGACTCGDCGRSFQSHHGYHAHLSVHAPKTCPGCNKLFRNQTCYMHHVKICCNLDCKQLDTHQTKHKVTVLVENRSNNKKIKVGMRGSVHKECICDYCKKKFAGRKFVAAHIQIVHMKNTHKPCAYCGKLLAAAHMTEHLKKHELNESYTCEMCGIVLKTRLGYKQHIRLHTGERPYPCQYCGQTFSASSRRSEHVRKTHNNTEIVLKHACELCPARFRLPYRLKKHMVSVHGDGSEPGPHFVCTVCQEKFSSCRGLLHHSRKHQSAVEEEPALPRGVCRTCFDDTLTAFHFRKLCGVSALLWQDTTSYLETLQEPKKDDKAFFVFYNDKEQAVVADQRSRVFSKQEALDKLNGEFLLKTRKPVRVKRRKVIPCTCPDCGKRFMSAELLNKHLRCSTKRACNICGTVKSKKRLAKHFALVHDVHLVNCTKCNENFENDELMLQHYVDTHETRYACGICSQGFVNERALSAHMYSHNTFYCGSCNSSFENRKCYKHHESQCKKVARQVLNLFACDYCGVTYNKKPSLKIHIIHKHLNVLPFICQTCGKRTSTIGHLRSHEMTHKINRNVYECYCGAKLRTELGFELHQRIHSGEKPFECEECGDRFLSSSRRLDHIKRRHRGNEGMPYACEKCSSRFIRPCELKKHYLNVHGSVVEVVPFRGRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -