Darc022010.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drepana arcuata
Gene Symbol
-
Assembly
GCA_016069955.1
Location
JACCPG010011396.1:152228-163844[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 4.6e-05 0.004 17.9 0.7 1 23 194 216 194 216 0.98
2 28 0.00047 0.04 14.8 0.4 3 20 249 266 247 268 0.93
3 28 1.5e-05 0.0013 19.5 0.9 1 23 298 321 298 321 0.97
4 28 0.0041 0.35 11.8 0.1 1 23 372 395 372 395 0.97
5 28 0.014 1.2 10.2 0.1 1 23 409 431 409 431 0.96
6 28 0.00083 0.071 14.0 4.5 2 23 474 496 473 496 0.95
7 28 0.0083 0.71 10.8 3.7 2 23 537 559 537 559 0.97
8 28 0.00011 0.0097 16.7 0.7 1 23 609 632 609 632 0.97
9 28 0.0078 0.67 10.9 1.5 1 23 688 710 688 710 0.97
10 28 0.0022 0.19 12.7 5.9 2 23 722 743 721 743 0.97
11 28 0.015 1.3 10.0 0.5 2 23 755 776 754 776 0.96
12 28 0.0055 0.47 11.4 1.1 1 23 786 808 786 808 0.98
13 28 0.15 13 6.9 7.2 1 23 837 859 837 859 0.95
14 28 0.00077 0.065 14.1 4.9 1 23 870 892 870 892 0.98
15 28 4e-06 0.00034 21.3 0.6 1 23 900 922 900 922 0.98
16 28 0.0095 0.81 10.7 0.1 2 23 942 964 941 964 0.97
17 28 0.24 20 6.3 0.4 1 23 982 1004 982 1004 0.93
18 28 0.067 5.7 8.0 4.1 1 23 1011 1033 1011 1033 0.98
19 28 0.068 5.8 8.0 3.6 2 23 1044 1066 1043 1066 0.95
20 28 0.0009 0.077 13.9 0.2 2 23 1089 1110 1088 1110 0.95
21 28 0.00061 0.052 14.4 0.2 2 23 1191 1212 1190 1212 0.95
22 28 1.2 1e+02 4.0 5.1 5 23 1222 1240 1220 1240 0.94
23 28 0.01 0.9 10.5 0.8 2 23 1251 1273 1250 1273 0.95
24 28 0.42 36 5.5 4.6 2 23 1290 1308 1290 1308 0.94
25 28 3.4 2.9e+02 2.6 3.3 2 20 1312 1330 1311 1332 0.92
26 28 0.19 16 6.6 0.4 2 23 1380 1401 1379 1401 0.93
27 28 0.00039 0.033 15.0 0.6 2 23 1412 1434 1411 1434 0.96
28 28 0.33 28 5.8 3.3 2 20 1472 1490 1471 1492 0.94

Sequence Information

Coding Sequence
ATGGCCCTCAAACTCGGGAAATGTAGACTTTGCCTCAAACTGGGCGACTTTTACTCAATATTCACTGCTGACAATGGAATGCAACTCGCGGAAATGGTTATGGATTGTGCAAGGATTAAAGTATATGACGGAGATGGGCTTCCCGACAAAGTGTGTTCCGAATGCATTCAAAAACTTAGCAGCGCGTATATTTTTAAACAGCAGTGCGAACGATCCGATCAGGAATTACGACGAAATTATGTTCCACCTCCAGGGTTCAGCATCAGCCCCCCACCACCCACCAGACAAAGCAGTGATTCAGCGTTTTCAACTCACACAGACATTTCTAAGCCATCTTCTTCCACGACCGGTAAAGTCACCACCGCCCCGCGAAGTCGTAAAAGAAGCATAGAAAGCATCGACAATGCCTCCGTCGGAAGCCGGTCCCAGGAGTACAGATCCTCCAGTTCCAAACACGTAGAGGAACTCAGAAAAGGTCACAAAAAGCCGAGAACCCAATATGGTAATGCATCGTCAGATTACGAAGATAACTTCATGGGCGATACGGACTCCGACTACGAACCGATAGCCAGCAACGATTACAAATGCAAGATTTGCTCAAAGAGCTTCAAAAGTTTGAAGAGTGTTGCCATCCACGCGCGGATCCACAATGCGGATAGACAGGAGAGCGTGCGCGAGGACGAGCTAGCAGGCATTCCGAGCAGAAGCACGGAGGACGCGGCTGACGTCGAGGACAAGCTAGCCTGCGACCACTGCGGCAAGACCTTCAAACTTAAGATTATGCTGAACCGGCACAAAGACGTGTGCGGGATGGAGCCTAGACCTCAGATGAAAAAGGAACTGCTTGTCTCGCTCGAGCCAATAGACCGTGTGAATACGAAAGACAAAAGGTTCGACTGCCAAATGTGTACGACAAAATTTAAGACGATAGAAAACCTTGAAAAGCACATGAGGGTGGTTCACGCTGCGGTGCTCAAAAGAAATAGCGTATCACCTAGCGAGAACAATGGCGTGGTGTCGGTGCCTTGTATCTACTGCAAGGAGACGTTCGACGATTTCTACTTACACTGCGCCCATTTCAGCGCGTGCTCGAAGCGCGACGAGTCGCTCCCGTACAAATGTCTGATATGCGGCAAGGTGATGGGTCGCAGCGCGTCGTACATCGCGCACCTGAAGAATATCCATTTCGAGCTGAACTGCAAGGCCGAGGAGGAGCTGGACTACTACGAGTGCCGGATGTGCAACACCAAGCTGGCGACCCAGGAGATGCTCATCACGCACCTGGCCGCGCACATGTCCTGCTACGAGGAGGGCGAGGAGTGCGAGGACGACGACGAGGACTACAGATCAAGCACGCGAGACGATACTGCGTCCGTAAATTCGGTGTATAGCGGCAAGTATGTATCCTCGGGACCTCTCAAATGTACTCTTTGCAACAAGAAATTCACGTACAAAAAAGCCCTGATGACCCATCTCGAGAGGTGCCATACTAGCCCAGGGGAAGCTGAAGTAAAACAGGAATTGCCAGATAAACCGTCCACCAGCCTCCTCAGCGAAACCTACCGCCCGTCAGAGTCGGAGTCTAGTCAAGATGAAGGAGACGACAATACCTGCGATATTTGTGAGAAACAGTTCTCCTACAGGCGCGTACTCCTGCATCACAAGCGAACTAAACATAACATGAGCTCGGGCACGAAGCGAGCAAAAATCAACCTTAAAGACTGCTCGGTGAAATGTTTGACATGCGATGTTGAAATGAAGGTGAGCGCCATTAACGAGCACAACCAGAAGCACATATCGATGAACATGAAGCCCCGCAATGTGTACACTTGCGCCGAGTGCGGGGAAAAGTTCAAGAGTTGCAGCGCGCTCGGGAGCCACATCAAGTTGTTGCACAGGCTCAAACAACAGGTGCCCAACATACAGGGAGAGATAGCGGATTTTTGTGAAGTCGTTGTGACGAAAGCGGAACCCCTGGATTCCAACCCCTGGAGCCAGAGTCGCAACGAGTTCCCGGAAGTTCCGCTGACCGACAGCAAGGCGCTTGTGAACCTTAGCGGCTTCACGTGCCACATCTGCAGTAAGAAGATGCCCACGCTGATATCGCTCAAGAGGCATGTGAACTGGCACACTAATGTGGGCAACAACATACAGAAAGCAACTGAATGCTTCATCTGCAAAGAGACATTCAGGTTCCAATGCCACTACAAGATCCACATGCGCGTGCACTACCAGGACACCAGCCTGGACCCCAAGTTCCTGACGTGCACCATCTGCGACCGCCGCAGCAAGAACCTGCGCGCGGCCACGGCCCACATGAACTTCCACAAACAGACACGCTTCAAGAACAAGGACTACCAATGCTCCATTTGCAAGAGGGTGTTCCAATTCAGGAAAGTATATCTCTCGCACATGGCTATACATTACAAACGTGGCGAGAGCATTCAGAACACTGTTGTGGGAGCCATGCTGCCCAACACGGCAGATAGGTCCGTATTTGACGGCACGCATACTTGTCACTTTTGCGGGCAGGTTTGCGAATCGGAAACATCTTTAAAGCATCACGTCACGTGGCACAAATCAAAGACGTCACTCTATGGCGCTCGCCACGAGTGCAACATATGTCATGTCATGTTCACAAACAAGAGAAGACTCGAGCTACATACGAGAACACATTTCGAAGACGACAATGGCCCTTACAAGTGCCCCATATGTGGGAAAGGATTCATCGATGAAAACTATTTCAAGCGACACACAAAGGCACACAATTTCGACCATATATCTCATAAGAAACGTATAGAGAAACTTCGCAAGGATAAAGTGAAGTGTCCCATATGTACCCGGTATTATCCGGATCTGGTGAAGCTCATTGGGCACCTGAGGAAGATGCACCCGGAGAGCAAGATGGTCAAAGAAGACCCCGATGCGCCTTCGCAGCCGTATTTCTCGTGCAAGCTCTGTGCAAAAGTTTTCCTCGACCAACGCAGGTTGCAAAATCACGAGGAAGCTCATTTGAGGAAACCGGAGTTCTTCAAGTGCAAATTCTGCGGTAAGAACACAATATCCCTCAAAAATCATAGAGTTCATATAAAATCTCATTTGACCCAAAAGTATATAGACAATCCTCTGAAGTGCTACAAATGCGAGCAGACGTTTATAAAAGGGTATGATTTACACCACCACCTGCGCGACGACCACAGCATCAATGAGACCTGGATGGCGGAGAGGAAGGAGGTCACCCTGGATGGACCTCTGAAGGAGTTACAGTGCTCTATTTGTTACAAAGTGCTCGCCAGTAAAGGCAACTATGAGAGGCACATTGACTACCACAATTCCCTCAGGTGCAACTACTGTTTCGACTACTTCAGCGGGCTAAGATTCCTCGAAGGTCATCTGGCTTTCAGCTGCAATAAAAAGAAGCTGATTGGTGACACCGAAGTGTACCCCAGGAAGATGAAGTGCCACTGGTGCTACAAAGCGTTCCACTTACAAGTGAAGTTGGACTGTCACTTGCGCACACAACACGACGTGCGCGTGTGTAGAGAGGCCTCGGAGAACAAGCAGGAGATTGTCTGCGATTATTGCTTCAAAGTGTTCGAAAACGAATACGCACTTAACAACCATAAGATATACCACCGAACCATCGGCTTCTTCGGCTGCATCTACTGCAATAGGAAGTTCAATACTCTAACACTCTACAGAAAACATAAGAACCACCACTTATATACGCTGAACGTGGACAATCCGACCAAATGTGAGCATTGTGACGAGACGTTTGTCGCGTTCAGAGACATGATATATCACATGAGAGACGTCCACAATGACGACAAGGAGTGGGTTATCATGCCGAAGGAGTCCGTTGAAGAGACATGCACCATTTGTAACAAGACCTTCTTCAATCTACACAGACATCTTCAGTACCATGAGGAGAATAAATGCAAGAAGTGCAATGAGTATTTCTATTCGAGACTCGATTACGACCACCATCTCTGCGCTGTGGACAGTGAAGACGAACCGACAGAAACAAATGATAACGAACCCGCCAAGTATCAGGAATGCACGTTTTGCTTCAAACCAATCACTAAGAAAGATTCCAAGTTGAAACACGACAAGATTCACAGAGGCTCGGGCTCTATATCGTGCAGGTTCTGCCCGCTCAAGTTCAAGACAATAGACGCCTTCAATATTCACGCATTCTCCCACCGGAGTCGGAAGTACTACAAAAAGCCGATTAAGTGTCGAAAATGTGGCGAGAAATTTGTCCAATACGGGCCTTTTATGAGGCACATGAAGTCCGTTCATAAATCCACGAAGAAGGTCCACTATAGGACGACGGTGATGCCCGAGCGCTGCCGCGTCTGCGGCGATGACTTCCCTAATCTCCACAACCATTACCGCGCGCATTTGCTGAACCAATGCCAGCTTTGTCGCAAGTACTTCACTTCTTCCAGACTGTTCTCTAAACACGAGTGCGATAAGGAGGACAGTGACCCCTCTAAAGTGTTCACTTGCGACGAAAATCTGTTGTCGCTAATAAAAACGTATGTTCCCAAAGATGAGAATCATGACGAGAAGTTCTACGGTCACCCGGATGAGGATGAAGACAGTGTACCGTATGCCGAGCCCCAGGACGAGGCGGGCCAACACGAGAGAAATGTTCATTCATTTGCCCAATCGCCTATCATCTCGGATGTGCTGTCACTTTATCAAAAACAGGAGGTTGATAGTCAAAACGGAAGTCAAGTTGATGACGCCAGTCAGAATGGTGACGAGGTGAGTCAGAACGGTGATGAGCTGAGTCAGAGCGGTGATGGTGATGTGAAGAGAGCCGAGGGCGCGGGGAGCGTGGTGAACTTGGCAGACGATGATTCCGTCGACTTCTATGATTCAGTCGAGCAAGTTATAGTTGTCGTTGACGACGACTGA
Protein Sequence
MALKLGKCRLCLKLGDFYSIFTADNGMQLAEMVMDCARIKVYDGDGLPDKVCSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPTRQSSDSAFSTHTDISKPSSSTTGKVTTAPRSRKRSIESIDNASVGSRSQEYRSSSSKHVEELRKGHKKPRTQYGNASSDYEDNFMGDTDSDYEPIASNDYKCKICSKSFKSLKSVAIHARIHNADRQESVREDELAGIPSRSTEDAADVEDKLACDHCGKTFKLKIMLNRHKDVCGMEPRPQMKKELLVSLEPIDRVNTKDKRFDCQMCTTKFKTIENLEKHMRVVHAAVLKRNSVSPSENNGVVSVPCIYCKETFDDFYLHCAHFSACSKRDESLPYKCLICGKVMGRSASYIAHLKNIHFELNCKAEEELDYYECRMCNTKLATQEMLITHLAAHMSCYEEGEECEDDDEDYRSSTRDDTASVNSVYSGKYVSSGPLKCTLCNKKFTYKKALMTHLERCHTSPGEAEVKQELPDKPSTSLLSETYRPSESESSQDEGDDNTCDICEKQFSYRRVLLHHKRTKHNMSSGTKRAKINLKDCSVKCLTCDVEMKVSAINEHNQKHISMNMKPRNVYTCAECGEKFKSCSALGSHIKLLHRLKQQVPNIQGEIADFCEVVVTKAEPLDSNPWSQSRNEFPEVPLTDSKALVNLSGFTCHICSKKMPTLISLKRHVNWHTNVGNNIQKATECFICKETFRFQCHYKIHMRVHYQDTSLDPKFLTCTICDRRSKNLRAATAHMNFHKQTRFKNKDYQCSICKRVFQFRKVYLSHMAIHYKRGESIQNTVVGAMLPNTADRSVFDGTHTCHFCGQVCESETSLKHHVTWHKSKTSLYGARHECNICHVMFTNKRRLELHTRTHFEDDNGPYKCPICGKGFIDENYFKRHTKAHNFDHISHKKRIEKLRKDKVKCPICTRYYPDLVKLIGHLRKMHPESKMVKEDPDAPSQPYFSCKLCAKVFLDQRRLQNHEEAHLRKPEFFKCKFCGKNTISLKNHRVHIKSHLTQKYIDNPLKCYKCEQTFIKGYDLHHHLRDDHSINETWMAERKEVTLDGPLKELQCSICYKVLASKGNYERHIDYHNSLRCNYCFDYFSGLRFLEGHLAFSCNKKKLIGDTEVYPRKMKCHWCYKAFHLQVKLDCHLRTQHDVRVCREASENKQEIVCDYCFKVFENEYALNNHKIYHRTIGFFGCIYCNRKFNTLTLYRKHKNHHLYTLNVDNPTKCEHCDETFVAFRDMIYHMRDVHNDDKEWVIMPKESVEETCTICNKTFFNLHRHLQYHEENKCKKCNEYFYSRLDYDHHLCAVDSEDEPTETNDNEPAKYQECTFCFKPITKKDSKLKHDKIHRGSGSISCRFCPLKFKTIDAFNIHAFSHRSRKYYKKPIKCRKCGEKFVQYGPFMRHMKSVHKSTKKVHYRTTVMPERCRVCGDDFPNLHNHYRAHLLNQCQLCRKYFTSSRLFSKHECDKEDSDPSKVFTCDENLLSLIKTYVPKDENHDEKFYGHPDEDEDSVPYAEPQDEAGQHERNVHSFAQSPIISDVLSLYQKQEVDSQNGSQVDDASQNGDEVSQNGDELSQSGDGDVKRAEGAGSVVNLADDDSVDFYDSVEQVIVVVDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00468349;
90% Identity
iTF_00468349;
80% Identity
-