Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_016069955.1
Location
JACCPG010011243.1:53836-57098[-]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.071 1.7e+03 -0.9 1.7 50 102 39 91 18 112 0.46
2 3 1e-102 2.4e-98 328.8 7.8 2 218 219 427 218 427 0.94
3 3 0.17 4e+03 -2.1 2.3 45 82 636 658 558 711 0.54

Sequence Information

Coding Sequence
ATGGACGGAGCGTCAAAGGTGATGGACCCGCCTCAACAGGCGGATGTAAGCAGCAATAATAAACACGATACAATTGGTTTAAACACAGTAGAAGGGTTTTATGCGATTAAGGATGAGAAAAGTAGTGATAGTGACACTCATAGTGAAGATCTTAGCTCTAATGATGAACAAAATAATTTAATCAGTAGTAGTAACTCTCAGTTCTATGAGAGTAGTGATAGTAAGATAGATTATGCTATAAAAACAGATGATAATGATACTCTAAGTGACATAGACGATATAAAAACAGATAGTGCTTCAGCTGATAGTGAAGACTCTGCACTTGGCAGCTTACCGCCAGACGGGACTTTGAATGAGCGAGAAGAGGAAGCTCGAGATAGGTCGGAAGGAAGTGATTCGGGACTTGGTTCCGAGACAATTGATGATGCAAATTTACCAAATTTCAACCTTTCACTGCCATGCACAAGTAGCGCAAATAATCTAAACCCTGATGTTGTTTCTATGCACAGCCAAAAAGTAGTATCTCATGAAAATATCAAGGAAAACAAACCTGAAATATGCCATAATAATGAAGCACAAGTCAACACTCCTTTAAAGAGCAGCATAAAGAGGAAATGTGTTGATGATTATAATGACGCCCCACAGCTCAAGAAACGGAAAGGAAGCATTCAATTTGACAATGTAACAGTATTCTATTTTCCGAGAGCTCAAGGGTTTTCTTGTGTCCCTTCTCAAGGGGGTTCGACTTTAGGAATGGAATGGGAACATTCGCACATACAAAGGTTCACTTTAACAGAACATGCTTTGGAACAACGAAGATTGCATAGGCAAATCTTACAGCAGTTAAAAAGCGAACGCCATTCATTACAGGGTGCGTTACTATCCTCGAGCGAAGATAGCGATACTGAGGAAGAAGCTAGCGATATTTCTGAATCAGAACTGGACTTGGATAGCTATTATTTTCTGCAGCCAGTCCCGACGCGGCAAAGGAGAGCACTACTACGCGCAGCTGGTGTGAGAAAGATCGAAGGCTATGAAAAAGATGAATGTAGAGATATCAGAACATCAAGAGAATTTTGTGGTTGTGCTTGTAAAGGTACCTGTAATCCAGAAAATTGTTCTTGTAGTCTGGCTGGAATCAAATGTCAGGTCGATAGACTTAACTTCCCATGTGGATGTACTAGAGATTGTTGTGGCAATACATCAGGACGGATAGAGTTCAACCCTGTGAGGGTCAGAACTCATTTTATACACACCCTCATGAGAATAGGCCTTGAGAAGAAGAACGAAGAGAATCAAGAGGCTGCTAAAAGAGAATGGGCGGAAGCTCGAATCGCTAATACCGGTTGTTCTTCCAACTCATCGTACGAGAGTGAACGTTGCTTTAGCCATGAAGACGGCTTACTGCGCGATGTTAGTTTGACTCCAAGGGTAGAGGTTGAATCTTGTGTAAATTCAGGAAGTTTTAATAACGTCCATTGTGATATGAACAATTCAAATGTTCAGAATAGTGTGCAAAGCGGAATGTCTTATAACTATAGGACTGATGGATCCAATCACGTAAACATTAATGATAATGTGATCCATTTTGAAAACGCTAGTAACCATCATACTCACAACGCCGCGTACACACCTAACATACTCCAAGGCAAAGGGCCACCTTACACAACAGCCAGCACAATCGGATTCGATAACATGTCAAATAATATGCAAAGATTTCCAAATGATCTCAACTATTCCTATGACCATCAAGACCACTTTAAGGGTCTACAGAGCTTTTCCGCAACGAGATTCGAGGAGTTCGCTCACAATTCACAAATGAGTATGTTTAGCCATTACGGTCACATGTACGCACCCGAGTACTCACATAAGTCTACTACGAGTTTGCACGATCAAATGCAATATCACAGTATGCAGCAAAATCATTACGATATGTACAAAAACAATACGTCAGAATGTCTCAATATTGAAAATAAAAATGGTTCCCAGTACACAAATTTATTGTCGATGTCTTATCAAAATAGTAACAAGTTGCAAACGGTCGAAAATGATGAGAACTGGTTCAGCCATAACACGCTACTGAACTTGGACCACACGGACCAAACTACTCAAGACGCTTCTGATGCCCACGCTCAGCCTCCGGCTACCCCGGCGGAACCAAGCGCCGCCGACACAACAGAAAACTTCGGAGAACTAATTAAAAAAACTATGGTAGAATCTGTTATTGTGTAG
Protein Sequence
MDGASKVMDPPQQADVSSNNKHDTIGLNTVEGFYAIKDEKSSDSDTHSEDLSSNDEQNNLISSSNSQFYESSDSKIDYAIKTDDNDTLSDIDDIKTDSASADSEDSALGSLPPDGTLNEREEEARDRSEGSDSGLGSETIDDANLPNFNLSLPCTSSANNLNPDVVSMHSQKVVSHENIKENKPEICHNNEAQVNTPLKSSIKRKCVDDYNDAPQLKKRKGSIQFDNVTVFYFPRAQGFSCVPSQGGSTLGMEWEHSHIQRFTLTEHALEQRRLHRQILQQLKSERHSLQGALLSSSEDSDTEEEASDISESELDLDSYYFLQPVPTRQRRALLRAAGVRKIEGYEKDECRDIRTSREFCGCACKGTCNPENCSCSLAGIKCQVDRLNFPCGCTRDCCGNTSGRIEFNPVRVRTHFIHTLMRIGLEKKNEENQEAAKREWAEARIANTGCSSNSSYESERCFSHEDGLLRDVSLTPRVEVESCVNSGSFNNVHCDMNNSNVQNSVQSGMSYNYRTDGSNHVNINDNVIHFENASNHHTHNAAYTPNILQGKGPPYTTASTIGFDNMSNNMQRFPNDLNYSYDHQDHFKGLQSFSATRFEEFAHNSQMSMFSHYGHMYAPEYSHKSTTSLHDQMQYHSMQQNHYDMYKNNTSECLNIENKNGSQYTNLLSMSYQNSNKLQTVENDENWFSHNTLLNLDHTDQTTQDASDAHAQPPATPAEPSAADTTENFGELIKKTMVESVIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00468186; iTF_00723971;
90% Identity
iTF_00468186;
80% Identity
-