Basic Information

Gene Symbol
-
Assembly
GCA_016069955.1
Location
JACCPG010000619.1:10489-16523[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.46 7.9e+02 0.7 0.0 23 44 354 374 349 376 0.90
2 6 0.11 1.9e+02 2.7 0.1 22 44 447 474 425 476 0.71
3 6 0.023 39 4.9 0.0 20 40 592 613 576 617 0.89
4 6 0.0039 6.7 7.3 0.0 3 45 670 721 668 722 0.79
5 6 5.2e-05 0.089 13.3 0.2 15 39 838 869 822 874 0.79
6 6 0.018 31 5.2 0.6 3 16 1023 1036 1021 1045 0.85

Sequence Information

Coding Sequence
ATGGAACAAATAGTGGTGAAGACTGAGATGGGTACGAATGGAGAGATATTGCTGTTCTACGTCAACGAAAATGGTGACACAGAACAAGCTGTTCTATCAGAATTAGATGGTATCCAGCACAGCCTACAACTGGATCAGACTGCCGACGGAGAGTACATTCTATCAGATGCATTAGAAGTGGAAGATGCAAGAGTGCAGGAACCCTTATTAGAAGCCATTCAAGAACAAGCTTATGAAGACAACCTCGAAGAAACGGGCGAGGATGCAGAAGCCTGGCTTGAAGACGACATAAAACGGCTTTTGGTATTTTACAATGACAATAAGCAAACATTCAAAGCTGTTTTACAAAAAACTCATCTATGGACCGTTGCCTGCAAGACTATACTGATTGGAAAAGAACCAGATGATTGTGAGGCTCAATTGCAAACTTTAAAATCAAAATACAACCAGATACGAAGTCATATTCAGAGGGGTGTCTATGTTAAATGGCCTTTCTTTGAACTCTGTCATCAGTCTTTTGAGGATGAAGACTCAGTGATGCTATTAGATGTTCAAGGTGATCAGACTGACCTATTGTTGAATGTAGCAACACCACAAGAGGAACAGCAGAATAATGTGGTTGTAAAGAAGAGTAATAGACTTGGCAGTGATGAGAAGGTCGAAGCTATGTTAACTTTATATCTGAGACATAAAATGGATTCCCAGAAAAATAATAGTAGGACTGGATTGTGGGAGACTATTGCTGTAGAGATGGGTGAAAATGATGTTGATTATTGGCACAAACGCTTCCTTAATTACAAACAGCATTACATAAGAGTCCTTGAAAAACAAAAGGTGACTGGTTCTGACGCCAGTAATTGGCCATATACCCAATTGTTTGATGAAATATTTGCAGATGATGAGGAGTTTCAGAGAAAATATGTAAAGAACATGAAAATTACAGCTCCAGTCAACGAGGATGAAGATTACTGGAATGATACTGAAAACATTGTTCTGGTAAAGTATTGCTTTGATTGCTTTGATGAGTTCCAAGATGCCACAATACCAAGCACTTTCCTCTGGAATGAAATTGGTCGGCTTTTGGATAAGGTGCCTGAAAAGTGTAAGGAAAAATATGAGGAGTTAAAAACAATACACTTAAACAAATATATAGAAGGCAGTTACAATTTGAGAGGCCGTAAGCCTTTGGAGCTATTATGTGATCATTTGATATCAAAGGAAACTGAAGTCATGATGGTAAGAAGCATAGATAACCATGACCAGGTGGAAATATGGAAAACTGAGGAGTTAGATGAGTTGGTGCAGTTTTTTTATGATAACATTGAAATGTTCAAAGATCCGTTATGTTACTTTGTGTGTTGGTCAGCAGTGAGTAAGAAGCTTGCGAGGGAGGTGTTCAGTTGCTTCAAGCACTGGGAGGAGCTGAAGGTCCTTTACAAGTCCATCTTGCATGATAAGAAGGAAAATTCAGATATGCAAATAGATTGGCGATACATTGAGTTGTTCGACAGGATATTCGACTATGGTATGGACACCAACCTCCTAGTTGGCTATGAGCAGTATAAAGAGTCTCCGGTAGTAGATGCTGGGAAAGTTGGGGTAAAAAAGTTGAACATTAGATCAGAGAACATAACGCAAGAAAACGGTTTTGTAAGCAAAGATGACGACTCTCTATACGAGGTACCCGCACAGCGAAAGAATTTGAACAATTCAAAAACAGTCAAAATATTGGAGTTCTACATGAAGAATAAAGATAAATTATCCAAACCCCAAGGCAATAAGTCTGTGTGGAAACTATTGGCTAAACAACTGGGCATCACAGCCGAGCAATGCATAAGCATGCTTAAAGACATCAAACACGAGTACATATCGTACGTACAGAAAGAAGTTGAAAGCTCAGAACAAATCAGCTGGCGTTACTACACTCTGTGCAAGAAAGTATTCGGCTACCGAGCCATTAAGAACAAGATCAAGAACAAAAAGTTGGAATCTGACTCCGGTAGTGATGAGTGGACCGACTCTGATATATATAAAATCTTAAATCACTTCTCACAGAACTTTGACCGAATCAACAGTAACACAGAGGATGTCAGTGCATGGGCTGATGTTGCAGCTGTGATTGACAAGACTGAGTATGCGTGCAAGGAGAAGTTCTTGGAACTTAGGAAGTCTTACAGGAAACTGCGGACCAGGTCCCGGAACCCTGACGTGAAGATAGCGTGGAAGTACTTCCATGCGATCGACAAGATCTATTTATCGAAAGAGGACACTAACTACGACTTGGTTGAGGGTGATGAGCAGGAGAATGTTGGTCACATAGACGAGGCGTCGATGGACACTCAAGAAGAAGAAGACTTCCAGTGCATCATCGTTATCCCTGAAGGCCAGGAACTGACCGACATTAACCAGGCACAAATAATTGTGCAGAAGAACACAGAAGAAGACAAACCGCCTAAAGTTTGTAAATGGACTAAACGCTCCAAGAAACGATTGCTCATCCTCTATATAAACTATTTGAGATCTCATAAAGGGCAGGCCATTAAACCCAACCAGATGTGGAGGGATATAGCTTCAAAATTGCCCAACAAAAGTCCCTTGTCTTGCAGAAAGATATTCGGCAAACTCAAGGCGAATCATATGCAGATGTCAATACAGGACAATAGTGCAAGCACACCATACTCCACGCTGTTGCAAAAGATACTCGCCATGAAGCCTAAGTTCGTCAAAATCGCTCAAAGTAAAGCGAAGGGGAAAACTTTCAAAGACGTCGATTTGCCAACGGATAAGGTCGAAAATGCTTTGAACTACTATCTGCAACATATCGAAGAGTTTGCTAGCCCCAGATACGAGAAGCAATACCTGTGGACCGAACTTGCCGAAAGCGTCTCAGAGCCAGTATCGAAAGTATATAACAAAATCAACTTCTTGAAGCAAGCCCACAATAATAACGAGCTTTCAGAGGAAGTTACCAAATTCAGTGAGGTATTAAAAGAGATATCTGCAAAAGAAATAGCGATCACTCTAGTGACGGAGACGACAGAGAAACCCAATGAGGAATTCAACGAAGTATGGACCGATGAAGAAATTGAGAAGTTATTGGAGTGGTATCTGAGTTATTTGGACAAGTTTAAGAACCCAAAGTTCCTAAGACGTTTCCTCTGGATGGAAGTTTCAAGCACTCTGCACAAAAGTCCGTTGGCTTGTTCAAAGAAAATGTTCGAAATCAGGACCCAGTATCGGAACATGGTTAGAGAGAACTCTGGGGAGTTATGCACGTGGAGATTCCATGATTTGTGTCAGAAAATATATGGGACTGGCAAAAAGACAATGTGA
Protein Sequence
MEQIVVKTEMGTNGEILLFYVNENGDTEQAVLSELDGIQHSLQLDQTADGEYILSDALEVEDARVQEPLLEAIQEQAYEDNLEETGEDAEAWLEDDIKRLLVFYNDNKQTFKAVLQKTHLWTVACKTILIGKEPDDCEAQLQTLKSKYNQIRSHIQRGVYVKWPFFELCHQSFEDEDSVMLLDVQGDQTDLLLNVATPQEEQQNNVVVKKSNRLGSDEKVEAMLTLYLRHKMDSQKNNSRTGLWETIAVEMGENDVDYWHKRFLNYKQHYIRVLEKQKVTGSDASNWPYTQLFDEIFADDEEFQRKYVKNMKITAPVNEDEDYWNDTENIVLVKYCFDCFDEFQDATIPSTFLWNEIGRLLDKVPEKCKEKYEELKTIHLNKYIEGSYNLRGRKPLELLCDHLISKETEVMMVRSIDNHDQVEIWKTEELDELVQFFYDNIEMFKDPLCYFVCWSAVSKKLAREVFSCFKHWEELKVLYKSILHDKKENSDMQIDWRYIELFDRIFDYGMDTNLLVGYEQYKESPVVDAGKVGVKKLNIRSENITQENGFVSKDDDSLYEVPAQRKNLNNSKTVKILEFYMKNKDKLSKPQGNKSVWKLLAKQLGITAEQCISMLKDIKHEYISYVQKEVESSEQISWRYYTLCKKVFGYRAIKNKIKNKKLESDSGSDEWTDSDIYKILNHFSQNFDRINSNTEDVSAWADVAAVIDKTEYACKEKFLELRKSYRKLRTRSRNPDVKIAWKYFHAIDKIYLSKEDTNYDLVEGDEQENVGHIDEASMDTQEEEDFQCIIVIPEGQELTDINQAQIIVQKNTEEDKPPKVCKWTKRSKKRLLILYINYLRSHKGQAIKPNQMWRDIASKLPNKSPLSCRKIFGKLKANHMQMSIQDNSASTPYSTLLQKILAMKPKFVKIAQSKAKGKTFKDVDLPTDKVENALNYYLQHIEEFASPRYEKQYLWTELAESVSEPVSKVYNKINFLKQAHNNNELSEEVTKFSEVLKEISAKEIAITLVTETTEKPNEEFNEVWTDEEIEKLLEWYLSYLDKFKNPKFLRRFLWMEVSSTLHKSPLACSKKMFEIRTQYRNMVRENSGELCTWRFHDLCQKIYGTGKKTM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00468138;
90% Identity
iTF_00468138;
80% Identity
-