Basic Information

Gene Symbol
-
Assembly
GCA_016069955.1
Location
JACCPG010003338.1:85943-88650[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 6.3 1.1e+04 -2.9 0.0 4 19 157 172 156 186 0.88
2 6 2.1 3.7e+03 -1.4 0.0 22 33 231 242 228 247 0.80
3 6 2.5e-06 0.0042 17.6 0.2 1 37 262 300 262 309 0.91
4 6 5.9e-08 0.0001 22.7 0.1 3 44 317 362 315 364 0.93
5 6 6e-10 1e-06 29.1 0.0 1 43 368 410 368 412 0.96
6 6 5.8e-07 0.001 19.6 0.0 4 45 421 464 419 465 0.94

Sequence Information

Coding Sequence
ATGGAAGTTGACATTGATAGTGACGAAGATACAGAAACTGAATTGGATGATATTGAACTGATAAATAAAGTCTTGAAAGCGGAAGATGTACCGTTAGCGAGCGAAACAAGTTCTCACATTTCAACGATAGCATCTAAAATTTCTATCGCTTCATCCAGCAAAGAACAAGAAGAACTAAGTAAAATACTAACAGCTTTATCACTCAACAAACAACTCGACGATAAATTGAGCCGCTTAGAAAAACTTCTTCTTTTCAAACTTCGCCAATGTAGACAAAAACTATCTGAAATCCAAGGATGCTTCAGAAAAAGTAGAAATATTGAGAAACATGACTCATTTCGTTATTATATCTGTGGCCGGCCATATTTCAAGGATAAGTCTAATTTTCCTGCTCCTGATAATGAAGACACCATTCTTATGGCCAAATCTAACATGTATGATTTCTCACAGGTTTTATCTGTACCAGGTTGGACTGTTAAAGACAAAAGCCAATTTATGTTGGCAATACACAAAATGTCTCAAGAAGTGCATAAGGAACGGCTATTATCAAAAATTGCACAGATAAAACGTGAAAATAAATGTAAAAGCATTGAAGTAGTAGAAAAGTTGATAGAGAGCATACATGAGGAGATACAAGCATTAAACAGGAAGCCCCTTCGAGAATTAGCTCTGCCTATAGATATGGAATATGATTGGGATACACTTGCTAACAAACTGAATCGTAGACATACAGCACATGAATACAGAGCTTTATGGAAGCTATTTTTCCATCCCAGTATTAATAAAAATAGTTGGAGCAAACGGGAGCATTTATCTTTGCAAGAAATTGCGAAAAATAATAACTTGCAAGATTGGGATGATATTGCCAAAAAGCATAACACTGGAAGGACAGGTTATCAGACATTTGTTTATTACCGCACAAACATGACTAACACCTTCACAGGTAGAAAATGGACGAGTGAAGAAGTAGAATATGTTAAACGCCTTATTGATTACTATAAAGAAGACAACTATATACCTTGGGGCAAAGTTGCTGCCTCAATGCAGAACCGCACAAAAATTCAAATCTATAATAAGTATTTACGGTTAATTGAGGAGAGGAAAGGTAGGTTCCTTCCTGAAGAAGATGCTGTTATACTGCATTGTGTTACAAAGTTTGGGCCAAATTTTAGAACAATTACCAGTTATTTACCTGGGAGATCGATTATTCAACTTCGAACACGGTACAAAGTCTTGTCTAAAATGCGAATTTCAGCTGTTTGGACAGTTCAAGAGGATAAGAGACTTATACAAATAATGTCTAACCAGGATTCTCTTATGCACTTTTCTGAAATAACAAAGCATTTCCCAGGCAAAGATAGGGCTAATTTGAGAAGTAGGTACCTCACTCTTGTGAAGTGGATGAAAAAGTTCCCTCATCTAGATGTTTCCCATGCACCAAGGCGTGGGGCCCGCCGCTTACCTCATGGCCAACCAAGTGAAAACCTAGTAAAGGCATTGGAAAATTTAAAAAATAGAATGCAGCTTGAAGTAGATTACAAAAGAAAGAAGAAGATCACAATACATTCGTCAGAAGAAGATATTGAAGATGGAATTGTTGCTGCATTGGTCAATGAAAATATTAAGACATATCAGATGGAAGACACAGAGAGACAAACATGTGCAGCATTAGCTCCAGAACAAAGTGTTGCATCTGAAAGACTGAATGTGACAAACCTTAGAAAATTATTAATCTTTCTTAATTCAAAGTTAAGAAAGGATGCCTTCACTAAAACTCATTACAGCCAAAAATATCCTGCATTGGCTGTTCCTTGTAGTGAAGTGTCTTCAGTTACAATCAAATCATACTCCAGGAAGTCATCAGTGCAGAACATAAAGCTCAATGGCTATCCAGATGTATGGGGAAATACTTGTCTGGGATCATTGAATTATGTGCTACCTCCCCATTATGCCACAATCACTGGCTGTAGAGCATTAATGTTGCAAGTGTCCAAGGTTATGCACGAACAACCTATTGCCCTTAATGTGCTAATGAGGAGAAACAATACATTAAAAGATCAAGTTCAGTGTCTTATGGATAGATTCTATACTTTGTTTGTGTGGCCTATGCTTTTATCAAATGAAGGACCTTGTGACAAAATATTTATTAAGGAACCAAAGACAGTGGTACCAAACAATTATAAAAAGGGAATAAGCAAAATGGTTTTGCCTTGTACTCCTTCGATCACCATGCCATTTGTGCCCGAGGATGAAAAATTTAAATTTGATGAAAATATAGACTTGGACTATAGTGATGACAAGAGCAACATAACTGTAGATGAGTCATTCAGTGATGAGAGTTTCTTTGATGTGTAA
Protein Sequence
MEVDIDSDEDTETELDDIELINKVLKAEDVPLASETSSHISTIASKISIASSSKEQEELSKILTALSLNKQLDDKLSRLEKLLLFKLRQCRQKLSEIQGCFRKSRNIEKHDSFRYYICGRPYFKDKSNFPAPDNEDTILMAKSNMYDFSQVLSVPGWTVKDKSQFMLAIHKMSQEVHKERLLSKIAQIKRENKCKSIEVVEKLIESIHEEIQALNRKPLRELALPIDMEYDWDTLANKLNRRHTAHEYRALWKLFFHPSINKNSWSKREHLSLQEIAKNNNLQDWDDIAKKHNTGRTGYQTFVYYRTNMTNTFTGRKWTSEEVEYVKRLIDYYKEDNYIPWGKVAASMQNRTKIQIYNKYLRLIEERKGRFLPEEDAVILHCVTKFGPNFRTITSYLPGRSIIQLRTRYKVLSKMRISAVWTVQEDKRLIQIMSNQDSLMHFSEITKHFPGKDRANLRSRYLTLVKWMKKFPHLDVSHAPRRGARRLPHGQPSENLVKALENLKNRMQLEVDYKRKKKITIHSSEEDIEDGIVAALVNENIKTYQMEDTERQTCAALAPEQSVASERLNVTNLRKLLIFLNSKLRKDAFTKTHYSQKYPALAVPCSEVSSVTIKSYSRKSSVQNIKLNGYPDVWGNTCLGSLNYVLPPHYATITGCRALMLQVSKVMHEQPIALNVLMRRNNTLKDQVQCLMDRFYTLFVWPMLLSNEGPCDKIFIKEPKTVVPNNYKKGISKMVLPCTPSITMPFVPEDEKFKFDENIDLDYSDDKSNITVDESFSDESFFDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00468124;
90% Identity
iTF_00468124;
80% Identity
-