Darc012012.1
Basic Information
- Insect
- Drepana arcuata
- Gene Symbol
- -
- Assembly
- GCA_016069955.1
- Location
- JACCPG010004589.1:66-4513[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4 7.5e+03 -2.8 0.0 29 38 30 39 30 39 0.92 2 2 2.6e-08 5.7e-05 23.1 0.0 1 38 41 78 41 82 0.92
Sequence Information
- Coding Sequence
- ATGCAAGGTACAAGTGCTGTTGGTGCTGCTGCTGTGATGAAGCCACAAAAGAAAAAAGAGTTAGAGAAGAAGAAGAAGAAGAAGAAGCCAAAAAATACTATAGAAAAAAGAAAACAATATTCAGAAGATAGTTTGAAAAAAGCATTGGACGCAATTGAAAGTGGTATGCCTAAAAAGCAAGCAGCGAAGCAATTTCAAGTACCCCGAGCTACTTTACAATTTCGTATCAAAAACCCAAATCACAAACCACTGCCAGGTCCAAGCCCAGTACTAAATGAAGAAGAAGAAAATCAAATAAAGAATTGGCTGACTGTTAGCCACAAGAAGGGCTTTCCGAAACGAAAAGAAGATGTCCTGAAAAGTGTGTCGGAATTCGTAAAAAAGAGTGGAAGGCCTAACCCATTTAAAGACAATATCCCTGGGGAAAAGTGGTTCAAACTGTTCCTAAAACGGCACCCGGATATTTCAATACGCACTCCAGAAGCTGTGACATCCGCGAGTGCAGCAGTTTCAGAGAATGATATAAAAGGATGGTTCAAAGATATTGAGGAATACCTAAAAGAACAGAATCTCTTTGAAATACTGCTAGACCCTAGAAGGGTTTTAAATGGAGACGAAACTAATTTTGTCCTTTGTGAAAAAACTGGCGTTGTTTTAGCACCAAAGGGTGCTAAAAATGTCTATGAAGTAGACCACGCTCCAGCAAAAACCTCACTAACAGTGATGTTCACTTTTGCTGCCGATGGTGAAACTACTCCGCCTATGGTGATTTTTCCATATAAACGCTTGCCGAGGGAAATTGCATCAAAAGTGCCATCAGATTGGGGAATTGGACTAAGCGAAAATGGATGGATGAAAGCAGAAATATTTTTTCAATACATTGAAAAAGTCTTGCATCCACATTTAATAAAAAAAGGAGTACCATTCCCAGTTATATTATTTGTGGATCACAAGACACATCTGACGTACGTTGTTAGCGAGCTTTGCTCTGTATTAAATATTGTGCTTGTAGCTCTGTACCCCAATTGTACGCGATTGCTGCAGCCTGCAGACGTCTCGGCATTTAGACCTCTTAAAGGAGGATGGCAGAAGACAGTTTTGGAGTGGCGTCGTGATAATCCCGCAAAAGCATTAACCAAAGCAGATTTTGTGCCGCTTTTACAGAAAACGGTTGAAAAATGTGTAAAGCCTAACACAATTATTAACGGATTCCGTACCACTGGCCTTTATCCATGGAACCCAGATGCAGTAGATTACACAAAATGCTTGGGAAAAAAATTCAAGACGGTCAATGAAGACCCAGAGACAGATACTCACAGAGTACTGACTAAACGGGATTTTTTAAAAATAGTTGGGACGAGTACATTAGAGGAAATTATTGCGAAAAAGAATATGCCAGAGATGATTTTGAAAAAAGTATGGGATTACTTCAATGAAAAGAAAGACCAACAGCTAGACTCGGTACAGACAACCCAAAGCGTTGTTAATTCAAAAAAACAGAAAAACAGCGAAACAAATGAGAATGAGAATACCAATACTGATAACAAAGACTGCAACGAAAATGTACAACTCAGTGAAATAAGCAACCCAAATAGCATTCAAGAACAAGACTTCATGGACATAGAAAGTATGAATTTAATTTTTAGTGAAGGATATGATACGCCTGACTACATTTTATCGAAAAAAGTATTGGTCGAAGATATTGTGTGTCTTAATACAGAAAATATATGTAATGAATATGGCCAAATTGAGACAAATTTTAAAGGAAATTTAGGAAGCACATACAGCGATTCAGATGACGACTCTCAAACTATTGATTGTATACAAGTTTCTCACAAAGTGGAAATAGAACCATGCCGAGAAGGAAATAATTCTAGGACTGAAAACGTTCAACTAAACAACGAAACCCATTCAAATAAACAAATTATCACACCTGCAATAGTTTATCCACCTGAAACAGATATGAACCAAATAGAAATTCTGTCGGTAGAAAAAAATCCAACTTTTACCACCCCACTGAAAACAAATCTGCGCCAAATAAAATTAGACGATATTTTAGTGTTTCCTAAAACTCCTCAAAGAAAAGGAGTGAGAAATACAAAGAAGACTTCTTTTGTTGTAACATCAGGAGAATTTAAGGAAGAAGAACTCAAAAAAATCAAAGACAAGAAAGAAAAAGAAGAAGGCATTAAAAAACGGAAGGAAGAACGAGAACAAAAAAAGATACAAGCAAAAGCTAAACAAGTAGTGAAGAAAAAGAAACAATTTGCTAAACCTAAAGTTAAAAATACCAACGCGGCTGGTGGAGTGGCGATCTATCGTAAATTATCATCGACATCTACGGCGGAAGTGGTCCAAGTTGCGATTACAGACGTAACTCGTGTCATTAAAACCAAGGGTGACATGTGCATGACTGAAGTTACTTGCTTCGCCGCTAATACTAGCTTCAAGTTTATACTCGGTGCTGTATATATTCATCCAGGAGCTAGTATGCAGGATATTGGAATGTTGCTATGGCAAGGACTCGGTCCGTACATTCACAACAGCCAGTACGTGCCACCGTTCGTGCAAGTTGATTCTAGTATACCGATTCTTCTGTGTGGTGATTTTAACAAAAACGTAAAGCCTGACAACTCGTTTCTTAATTTCATGAAAAATACGTATAATCTTGATTGCGTATCAAACGTTTCTAAGTCAACTACGTTAAAAGGAACAACTATCGACTTGACTTTCGCAAGACACATTACAGCAGAAACACTTCCTTTCATTTCATATTTCTCCTATCATCGTCCTATCCTCAACAAAATCACTCAAATAGGAATTAGTTAA
- Protein Sequence
- MQGTSAVGAAAVMKPQKKKELEKKKKKKKPKNTIEKRKQYSEDSLKKALDAIESGMPKKQAAKQFQVPRATLQFRIKNPNHKPLPGPSPVLNEEEENQIKNWLTVSHKKGFPKRKEDVLKSVSEFVKKSGRPNPFKDNIPGEKWFKLFLKRHPDISIRTPEAVTSASAAVSENDIKGWFKDIEEYLKEQNLFEILLDPRRVLNGDETNFVLCEKTGVVLAPKGAKNVYEVDHAPAKTSLTVMFTFAADGETTPPMVIFPYKRLPREIASKVPSDWGIGLSENGWMKAEIFFQYIEKVLHPHLIKKGVPFPVILFVDHKTHLTYVVSELCSVLNIVLVALYPNCTRLLQPADVSAFRPLKGGWQKTVLEWRRDNPAKALTKADFVPLLQKTVEKCVKPNTIINGFRTTGLYPWNPDAVDYTKCLGKKFKTVNEDPETDTHRVLTKRDFLKIVGTSTLEEIIAKKNMPEMILKKVWDYFNEKKDQQLDSVQTTQSVVNSKKQKNSETNENENTNTDNKDCNENVQLSEISNPNSIQEQDFMDIESMNLIFSEGYDTPDYILSKKVLVEDIVCLNTENICNEYGQIETNFKGNLGSTYSDSDDDSQTIDCIQVSHKVEIEPCREGNNSRTENVQLNNETHSNKQIITPAIVYPPETDMNQIEILSVEKNPTFTTPLKTNLRQIKLDDILVFPKTPQRKGVRNTKKTSFVVTSGEFKEEELKKIKDKKEKEEGIKKRKEEREQKKIQAKAKQVVKKKKQFAKPKVKNTNAAGGVAIYRKLSSTSTAEVVQVAITDVTRVIKTKGDMCMTEVTCFAANTSFKFILGAVYIHPGASMQDIGMLLWQGLGPYIHNSQYVPPFVQVDSSIPILLCGDFNKNVKPDNSFLNFMKNTYNLDCVSNVSKSTTLKGTTIDLTFARHITAETLPFISYFSYHRPILNKITQIGIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00666477;
- 90% Identity
- iTF_00666477;
- 80% Identity
- -