Darc004162.1
Basic Information
- Insect
- Drepana arcuata
- Gene Symbol
- -
- Assembly
- GCA_016069955.1
- Location
- JACCPG010003832.1:19126-27167[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.3e-09 1.2e-05 25.4 0.1 1 35 95 130 95 135 0.93
Sequence Information
- Coding Sequence
- ATGATGACAGACGAGGAAGAGCTGCTGGTAGTGCTCGAGGATCATAAGGAGGAGAGCAAGTACAATGTTGGACTGGACCACGGTGATGCTGGCAGTCTAGAGACAGTGAACACGATCAAAGTCCAACTGTCCGAGGACGAGTCTCAGGAGTACGAGCAAGTGGAGTACTTGGATGAGGACCTGGAACCTGCTCCGGTGCCTACCGAGAAAAAAGAGCAGCGGCGCAGGAAGTGGCCCAGGAAGTTGCCCAAAGCTGACCGCTACAAGACATACAAACAGTACACGGAGGAGGATATGAAGTTGGCCATCGAGGCTGCTGCCTCTGAACGGATGACACTCGGCGAAGCAGCTGAAGCCTACAACGTGCCCGAGAAGACGCTGAAGCATAAAGTGCGGAGCTATATTGAAAATCCCGACGCCGAAAACCTGACAGACCATAAGCAATACAAATTCGTACAAGAGATCAAAGCCGTCCTGACCTACACAAACGCGACACCCTACAAGAGCAAAGCTATCAGATACTACTGTGCATATTGTACTACGGACGGGCCCTGCTTCGAAGAGGCAGATGACCTAAGAACTCACACACGGACCGTACATGCAGAGGACCGGATCAAACGGATCAACTTCATGATCAGACCTTACTGGATGAACGAGGTGCTGAAACTAGACATTGATAACCTTATGTGTACCGTCTGCTGCAGCCCCCTGGATAACTGGAACCACATGTTCAAACACCTCAAGCAAACACATGAGATCGAGCTAGACCAGGCTTACACGAGGATGGTGCCATATATCCTCCATCCTGACATGAAATGCGCTCTGTGTAAGGAACAGTTCTCCAATTACCTGATCCTGGACGGACATATGAATGCTCATTATAGTAACTATATATGCGGAGACTGCGGTGACTCCTTCGTTGCTTTATCTAGGCTGAAACAGCATTCGCAGATACACGATGTGGGACGGTTTCCCTGCGAATACTGCGGGAAAATATTTGCCTTGAAGAAGTATTTGAAGAAACATAAGGATTTAGTTCATACCAAGCAGCTACGGTACAAGTGCAAGTATTGTAATGAAATGTTCACTGGAGAATATGTAAGGCATTTGCATGTTGTGGACAAACACAAGGAGAAAGTTAAACATTTTACGTGCGAATACTGTGGCAAAGTATTTGACTGGAGGCAGTATTACTCTTCGCATATCAAGAAGACTCATATAAAAAATAAGCGGTTCGGTTGTCATCTGTGTCCGAAGAAGTTTGTCACCAATTTTGAGTTGAAGAATCATAAGAAAACTCATGATGGTAAGAGGTACCAGTGCGATATCTGCACGAAGTTGTTCACCAATAAAGTTGTGTTGAACTCCCATATGTTGGAGCATATCAAGACCAATCCTGAGTTGAGTCGGTGTTATGTGTGTGAACTGTGCAACGAGACATTTCATCTGAAGTCGGCCCTCAGTGAGCACATGAACACCCATGTCTCCATCGTGATTAAAGGTAAGAAGGTTGAGAAAGAATGA
- Protein Sequence
- MMTDEEELLVVLEDHKEESKYNVGLDHGDAGSLETVNTIKVQLSEDESQEYEQVEYLDEDLEPAPVPTEKKEQRRRKWPRKLPKADRYKTYKQYTEEDMKLAIEAAASERMTLGEAAEAYNVPEKTLKHKVRSYIENPDAENLTDHKQYKFVQEIKAVLTYTNATPYKSKAIRYYCAYCTTDGPCFEEADDLRTHTRTVHAEDRIKRINFMIRPYWMNEVLKLDIDNLMCTVCCSPLDNWNHMFKHLKQTHEIELDQAYTRMVPYILHPDMKCALCKEQFSNYLILDGHMNAHYSNYICGDCGDSFVALSRLKQHSQIHDVGRFPCEYCGKIFALKKYLKKHKDLVHTKQLRYKCKYCNEMFTGEYVRHLHVVDKHKEKVKHFTCEYCGKVFDWRQYYSSHIKKTHIKNKRFGCHLCPKKFVTNFELKNHKKTHDGKRYQCDICTKLFTNKVVLNSHMLEHIKTNPELSRCYVCELCNETFHLKSALSEHMNTHVSIVIKGKKVEKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00468468;
- 90% Identity
- iTF_00468468;
- 80% Identity
- iTF_00467714;