Basic Information

Gene Symbol
Arid2
Assembly
GCA_016069955.1
Location
JACCPG010000094.1:26296-66673[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-21 2.1e-17 63.7 0.0 2 89 25 109 24 109 0.94

Sequence Information

Coding Sequence
ATGTCTCAGTTAAAGTTGTTAATGATGGCAAAATTTCAAATAAATACTAAGTCTAGTAACTATATAAAGGATAAAGAGAGCTTCCTGAGGGATCTCAAACAATTCAACGAGAGTAAAAACTTACCATTCAAGATACCAGTGGTCAATGGCATTGAGATAGATCTATATCTGTTCTATACATTGGTTCAGCAAAGGGGTGGAATAGGCAAGGTAAACCAGAATGATACTTGGGAATCGTTTTTGCGCCCCTTGCGCCTACCACATCCGTGCATCAATGGTTCTACACTACTTAGAAGGATATATGGAATGTACTTAGAAAAATATGAACGCGCTAAAGGCCCGCCGGGAAGGGACGACGACAACGACATGGACGAGGATCCGAGGCGCGGGCGCGGCAGTGGCATGCCACGAATCTCATTTGGTGGAGGTACATACATTTCAGCCTCAGGTGAACCGCTTCGCACAGCATCCAAAGTCGCCGCGCCTTCCGAGAGGCTGGCGCTCTCGCTCATCTCGCCAATGCCGAACGAACAAGACTTTGCTGTCAACGTCTGCACGGTCCTGGCTGCCGACCACTCCAACAGGTTGCCGTTGTCGAGCACTCCTCATATATTGGACTTTCTGCTCGCTCATGCCGGTGTCTATAACCATGAAAGTCTGCGAGACACCATAGGGCGTTCGTACTACGAAGCTCGCGGCCGATACCCTCACGACTTCTGGAGCATGCGCGCTGGTGGAGGGGGGGCGAAGGAGCTCGCTGATGAGACCAAGTTCTCCCTTCACGGGGCCGACCCTCCTGAGCTGATGGTGCAGGCGCTAGCTGCTCACAACACCTTGACAGACTGCTTGATGCAGGATGGGGGAGAAGAAGAGGTTGTCGAAAAGATTGTTGAAGAGGATGTGCTGGAGGATTGGGTGACTGAGCCCTCGGACGAGAACCAGCTGTTCGCGCCGGAACTGCCCGGAGGCGCCTCTTGCGTGTACACGCAGCGAGTACTGCAGATAGCGTCTATAGTGCGCTCTCTCTCATTCCACGAGGAGAATGTGCAGCATCTCGCCAAGAACACAACCTTGATCAGATTTCTGTTGCTCTGCGCCAACTGTTGGGTCGGCTCTCTGCGACAGTCGGGGCTAGACACCCTTGGGAATGTCTCAACGGAACTAATTATAAAGGATCCTGCCACATGTTTGATATCTCGTCACGTGTTATCGACGATCCAGTCAGCCCTAGTGTCCCCCGATCGCGCTCGAGTCTTGGCTGCTCTGGAACTGCTCAATAAACTTGCACAGAACGAGGCCAATGAAGATGCTCTCCTCAAAGCCCTAGAGTCTAAGGTGTACGCGGACGTGTGCAGCCTGCTGACGCTGCGCGACATAATGGTGTTGGTGTGCACGCTGGAGTGCGTGTACGCGCTCACCTCGCTGGGGGACCGCGCCGCCGAGGCCGTGGCGCGCCTGCCCGGCCTCGTGCACACGCTCGTCGCGCTCGTCACCGTCGAGGCGCAAAGCTACGGCCCTCGTGCGTGCATCCTCATGCGTGTGGTGGAGACGGTAAGCGGACCGGCGCTTCACCATCTGGAGCAACAGCAGACGCAGCAATTAACCACAGTCCCCCCCACACCGATGCCCGTGGCCCCGGCCCCGGCCCCCGCGCCGGCCCTAGTAGTCCCCGCGCCGGCATTGTCGGCCGCACAGTCCCCCGCACCACTCTCATCCATCCAGCAGTCGCACCAACACCAGAGAACTGTTCAGGAAAACGAGCACTTTGCCCTCGCGTGGCTGAGGGCGTCGTATGAGGCTCTGCCGGCGAGCGACAACAGCGCCAGCGACGCGGCTGAGGTGTACCGCCAGTACCTGGCGTGCTGCGCCAAGCTCGGCCGCAAGGGAGTCATCGCGCCCGCACACTTTCCCCGCCTCGTGAGGACCGTTTTCGGCGGTACTGTTGGCCCGAATACGGCAACAATGTCCACAGGAGAGACGCAACAAGTATACATCGGTATACGGTCGAAAAATACGCAGACACGAACAAATCCACCTGCAGGGCCCGCATCTCCGATCCTGAAAGCGCAGCTGACGAACAAAACTCCGGAGGCGAAACCAGTTGTAACTCAACCGCAGGTGCAACAGCCAGCCCCTCACCCACACTTGTCGCAGGCCTTGGAGACGAATCCGTCGAACACGACTCTGATTAAGCACTTGTTAGCGCACAAAGTAAGCCCTGCCGTTCCCCAAGCGCAAGTTGCCCAAAGACAACAAAACCAGCAGAGAGGACCAGTCACGAATACGGTGGTCGTACAACCTAGTCAGGCTATGGAGGTAGACCCCGAAGCCTTAATTAAATGCACAACCATCACACCGGGAGGTATTGCCAGCAGCACACCAGCTCTTCAGGGTGAAAAGGTTATTATCAATGCTTCGGAGGAAACAATGGAGACAGGACATAAGAACGAACCAGTACAAATACAGATAGACGAACAAGCTCAGCTGACTATAAAAACGGCACAAAATAAAATGCTAGCGGACTTACTGGAAAAGAAATCCAACCCCCCAGTCCAAGTGGTACAGATGGGGCCTCAGATGAACGCACCAATGATACAAATCACGGAGACGGGTCAAATATTCCAAGTGAAACAGGAACCCTCTCCCGTCGTACAAATAGACGCCGAACCCAGTATGGGCAATCAGTATTTTCAAATAAAGAACGAACAGGGTCAACTAATTCAAATTAAGAACGAGCAAGGTCAAATCATTCAACTGAAGAGTGATCAGTTGCAGCCCCAATTGCTCCAGTATAAGAATGAACAGGGTCAGATAGTTCAGATCAAGACCGACTTGCCACCGCCCGGATTGGTCCAGATCAAACCGGATCACAAAGATCAGCTCGTTGATACAGTCGTCACTGATCATTCGTATACTGAGCCGCCGGTTAAGAAGATGAGGACCGAAGACAAAGTTGAGATATCTCCCCAAGAAAGCGTTTCGAAGACAGCAGCTAATTTGTACGCTGCTCTAGCCGCGTCTGCCTTAGAGGACGAAGAAGACTTGCTACCGCCGAAACAAGAGTCGATGGATGCGATCCAACCTTCTGTTATGGTCGCCGGCGCTGGTGATAATGCGTCAGTTATTATCCAAGAGCCCATATTACAGGTCCAACAACCAACAATGCAAGTTCAACAACCCGCAATGCAAGTTCAGCAACCAACGTTGCAAGTCCAGCAACCAACAATGCAGGTGCAGGCACCTGCGTTACAGGTCCAGCAACCAACAATGCAAGTCCAACAACCGATGCTTCAAGTTCAACCGATGGATGTGCAAAACCTAATAGCTTCACAATCTGGACAGATAATTTTGCAAGAGAAAAGTATAGCCGCCCAACAACCTCAGTATATGCAGCAACAAATGCAGATCATCGCCACACCGAGCTCCTCTCAAGGAGGTCTTAGCTACATAACTCAAAATCTTCCGGGTAATATGATGCAGAAAACAATAATTATCGTGCAGGGACCGACTGGGGGCGGACCTCTCACTCTAACGGTTAACAACCCAGCCGGTTTGGACGAGGCAACGCTAAACAGCCTTATTGCCCAGGCAACAGAGGCGATAACGCAACAGCAAATTATACAGAACACAGGCGTGATACAATCAACACAGAGGGTGATTGTCAGCCAACCGACGCTAGTGAGCACGGCACAACCCATCACAGTGGTTAAAACAACCATAACACAGAACACACCCCAAATAACGCCGAGTCAGCAACCGATAATAACCTCACAACCACAACCGCACAAGGCTCAAATTGCCAACTCTGCCCAAGCGCAGCAAATCGTCGTAACCCCAAAACAACCGCCGGCTTTGATCAGCTCGTCGTCGAACAACCTCGTGGCAAGCAACCAGCAACTTATACAGGGCAACCAGCAGATAATAGCAGTATCCAGTAACCAATCGATTATTATGAATAGCCAAGCGAAAGGTGCGATGCACAGAGTAGTGCAGCAACCACAGAGGTCACAAGTAGTCACCAGTGTGCCTCATACAATTGTCAATCAACAGGCGGTTATCAGCGAATCGAAAACCAGCGTCATTCAGGCTAATACGAAGTCTCAGCAACCAATGATGCGGCAAGTGATCACCCGGCAGCCGGTCATGGTGGGCAACACTAAGATTGGCGACAAGGAGATGATAGTCTCCCAGCCGGTCGTAGAGCAAAAACTACCTATGCCGAAGTCAGCCGCGACGCCGCCCCCGCCTACAGCCCAGCTGGTGACACAGGATGAAACACCGTGGATCTGCCACTGGAGAGGATGTGCCAAGTCGTTCCCGTCAGCGGGCGAGGTGTTCTCCCACGCTGCGCGCGCGCACTGCCCGGGCGGCGCGGGCGGCGAGGCAGCCTGCCAGTGGCTGGACTGCGACCGCGTGCCGCGCAAGACCTTCGCGCTCCTCAACCACCTTAACGACAAACACTGTACGCCGCAGGCGTTAAAGGCGATATACAACTCAAGAAGACACGCAACAGCCGAAGCTGAGGCCGGTAAGCCGGTCTCGCTGGGATACCCACCGAACGCGGCCCTAGCAGCACTAAATAAACACGCTACAGATATGTTCAACCCAAGGGAGTTAATGGACGAGAATGAAGGTCCAGTGACGAAAAGCATAAGATTGACAGCCGCTCTAATCCTCCGCAATATCGTCATATATTCTAACACGGGACGGCGCCAACTCCGGTCGTATGAGTCGCACCTGTCTAGCATCGCGCTGAGTAACGTCGAAGCTTCGCGGACGATTGCACAAGTGTTGTACGACATGAACAATATCTGA
Protein Sequence
MSQLKLLMMAKFQINTKSSNYIKDKESFLRDLKQFNESKNLPFKIPVVNGIEIDLYLFYTLVQQRGGIGKVNQNDTWESFLRPLRLPHPCINGSTLLRRIYGMYLEKYERAKGPPGRDDDNDMDEDPRRGRGSGMPRISFGGGTYISASGEPLRTASKVAAPSERLALSLISPMPNEQDFAVNVCTVLAADHSNRLPLSSTPHILDFLLAHAGVYNHESLRDTIGRSYYEARGRYPHDFWSMRAGGGGAKELADETKFSLHGADPPELMVQALAAHNTLTDCLMQDGGEEEVVEKIVEEDVLEDWVTEPSDENQLFAPELPGGASCVYTQRVLQIASIVRSLSFHEENVQHLAKNTTLIRFLLLCANCWVGSLRQSGLDTLGNVSTELIIKDPATCLISRHVLSTIQSALVSPDRARVLAALELLNKLAQNEANEDALLKALESKVYADVCSLLTLRDIMVLVCTLECVYALTSLGDRAAEAVARLPGLVHTLVALVTVEAQSYGPRACILMRVVETVSGPALHHLEQQQTQQLTTVPPTPMPVAPAPAPAPALVVPAPALSAAQSPAPLSSIQQSHQHQRTVQENEHFALAWLRASYEALPASDNSASDAAEVYRQYLACCAKLGRKGVIAPAHFPRLVRTVFGGTVGPNTATMSTGETQQVYIGIRSKNTQTRTNPPAGPASPILKAQLTNKTPEAKPVVTQPQVQQPAPHPHLSQALETNPSNTTLIKHLLAHKVSPAVPQAQVAQRQQNQQRGPVTNTVVVQPSQAMEVDPEALIKCTTITPGGIASSTPALQGEKVIINASEETMETGHKNEPVQIQIDEQAQLTIKTAQNKMLADLLEKKSNPPVQVVQMGPQMNAPMIQITETGQIFQVKQEPSPVVQIDAEPSMGNQYFQIKNEQGQLIQIKNEQGQIIQLKSDQLQPQLLQYKNEQGQIVQIKTDLPPPGLVQIKPDHKDQLVDTVVTDHSYTEPPVKKMRTEDKVEISPQESVSKTAANLYAALAASALEDEEDLLPPKQESMDAIQPSVMVAGAGDNASVIIQEPILQVQQPTMQVQQPAMQVQQPTLQVQQPTMQVQAPALQVQQPTMQVQQPMLQVQPMDVQNLIASQSGQIILQEKSIAAQQPQYMQQQMQIIATPSSSQGGLSYITQNLPGNMMQKTIIIVQGPTGGGPLTLTVNNPAGLDEATLNSLIAQATEAITQQQIIQNTGVIQSTQRVIVSQPTLVSTAQPITVVKTTITQNTPQITPSQQPIITSQPQPHKAQIANSAQAQQIVVTPKQPPALISSSSNNLVASNQQLIQGNQQIIAVSSNQSIIMNSQAKGAMHRVVQQPQRSQVVTSVPHTIVNQQAVISESKTSVIQANTKSQQPMMRQVITRQPVMVGNTKIGDKEMIVSQPVVEQKLPMPKSAATPPPPTAQLVTQDETPWICHWRGCAKSFPSAGEVFSHAARAHCPGGAGGEAACQWLDCDRVPRKTFALLNHLNDKHCTPQALKAIYNSRRHATAEAEAGKPVSLGYPPNAALAALNKHATDMFNPRELMDENEGPVTKSIRLTAALILRNIVIYSNTGRRQLRSYESHLSSIALSNVEASRTIAQVLYDMNNI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00467978;
90% Identity
iTF_00467978;
80% Identity
-