Basic Information

Gene Symbol
Xbp1
Assembly
GCA_016069955.1
Location
JACCPG010009605.1:7497-9072[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2 6.2e+03 -2.3 0.1 16 25 28 37 26 38 0.73
2 2 7.4e-18 1.1e-14 54.5 12.9 2 64 42 104 42 114 0.96

Sequence Information

Coding Sequence
ATGAGCGCTCCTATAATCATCACGGTCCCCAACAACTATTTGGTGGATGAGGATACGCAGGTGATGATGGACGTCGCCTCCCCCGCCCCCTCCAGGAAACGGCGGCTGGACCACCTCACCTGGGAGGAAAAGATGCAAAGAAAGAAGCTGAAGAATCGCGTGGCGGCGCAGACTTCCCGGGACAGGAAAAAGGCTAAAATGGACGAAATGGAAGATCGGCTGAAAAAGTTGATGGATGCGAATGACCGTCTGGTGAGCGAAGTGGAGAGCTTGAAAGCTTTGAACGAAAGGTTACTTAGCGAGAACACAGCGTTGAGCGCGGCGCGGATCGTCACGGGGGCCCAGGGACCGGCAGAGTCCACTCGGCAGAAGGGCGGGCCCCCGCCGGCGGTCCGCGCGGCGCGGCTGTTGATCGCGATGTACCTGATCTCACAGAGCTCCTCTCTCACTTCGACTCGCCAGAGTATCTCGACACCCTCCATCAACTTGCAGACTCCCTCCTCCAAGAGATTGATGCAGGTGCTGCAGGAGCGGCTCAAAATGTACCAGTCGGGGAGCATCGAGAATGTCCTGAAGGAACTCAAGTGGTGGGGCCCGCAGCAGAGCAGCTGGAACCCAGTGAAGGTGCCCTAG
Protein Sequence
MSAPIIITVPNNYLVDEDTQVMMDVASPAPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRLKKLMDANDRLVSEVESLKALNERLLSENTALSAARIVTGAQGPAESTRQKGGPPPAVRAARLLIAMYLISQSSSLTSTRQSISTPSINLQTPSSKRLMQVLQERLKMYQSGSIENVLKELKWWGPQQSSWNPVKVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-