Dpar030203.1
Basic Information
- Insect
- Dorcus parallelipipedus
- Gene Symbol
- nfxl1
- Assembly
- GCA_958336345.1
- Location
- OY284480.1:27867246-27872723[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.25 6.4e+03 -1.2 0.8 4 10 201 207 200 207 0.94 2 17 3e-07 0.0075 17.7 17.2 1 19 215 232 215 232 0.99 3 17 1.8e-06 0.046 15.2 14.8 3 19 270 286 268 286 0.92 4 17 2.5e-07 0.0062 18.0 11.9 1 18 321 338 321 339 0.96 5 17 2.4e-05 0.6 11.6 11.3 1 18 374 391 374 392 0.98 6 17 0.42 1.1e+04 -2.0 0.6 1 5 401 405 401 410 0.89 7 17 6.5e-05 1.6 10.2 17.1 1 18 426 443 426 444 0.94 8 17 6.2e-10 1.6e-05 26.3 13.4 1 18 453 470 453 471 0.97 9 17 2 5e+04 -4.5 2.2 5 10 499 504 499 504 0.58 10 17 0.07 1.8e+03 0.6 5.6 10 19 520 529 518 529 0.91 11 17 0.033 8.2e+02 1.6 4.7 2 11 540 548 539 549 0.85 12 17 1 2.5e+04 -3.2 5.8 14 18 577 581 577 582 0.89 13 17 0.23 5.8e+03 -1.1 0.5 6 10 608 612 607 614 0.86 14 17 0.00098 25 6.5 8.1 1 11 618 628 612 629 0.80 15 17 0.0013 32 6.1 17.5 3 19 659 675 658 675 0.92 16 17 2.3e-06 0.059 14.9 13.9 1 18 718 737 718 738 0.89 17 17 1.3 3.2e+04 -3.5 0.5 5 10 767 772 767 773 0.88
Sequence Information
- Coding Sequence
- ATGAGTGAGTACTTTAAGCCACCTAAACAGAAAAGCCCATGGGCTATAGGCAGGCAACAACAGCAAAATAGATCTACGAAGGTAACCTCAAATAACCTCAAAAACtctgaaaataaattcaaagaaGCAACCAGCAAGCATCAAGCAGCTGCCCAAAAGTATGCCAAAGATTATGAATCTTCATCCGAGGAAGAAGAACTCGAGTCGCAACATATAATAGATAAGATATTAGAGGGTTATGCACTCGGTGAGGCAGACAAAGAAAATTTAAGCCGCACTAAGAATTACTTAGAAGACGCTTTTGTATCGGGAGCTGCCACCTGTCTTATTTGCATATCGAGCATCAAGAGGAACGATTCTATATGGAGTTGTTCCGAGTGTTATTGCTTTTTTCACTTAATGTGCATTCAACGATGGTCTAAGGATACGATCACTCAAAAGAAACTGGCTTTGGAGGGGCAGGTGCAAGTAAAGAAGATAAAAGTCGCCTGGGGTTGCCCCAAATGTAGACACGACTATGAACCTGCCGATATTCCAACTCAGTATTTGTGCTTCTGTGGTAAAACTACCAATCCCGTATTTCAGTCACTGCTTGTACCACACTCGTGTGGAGAAAAATGTGGTAGAAGTTTGAAGCCAGAGTGTGGTCATGAATGCGTTTTACTTTGTCATCCAGGGCCTTGTCCTCCTTGTCCTAAAACTGTTACTGTTAAATGCTATTGCGGTATTCAACCACCAAAAGTCCAGCGATGCAGCAATAAAGAATGGTCATGTGGAAATCCGTGTAACAAATTACTAGCTTGTAAAAAACATAAATGTGTGCAGCCATGTCATTCCGGTGAATGTGAACCATGCTCGAAAAAAAGCATTCAGAAATGTTTGTGCGGATCTAGTCAGAAATTACGTGACTGTGCTTCCCCAATCTGGCAGTGTGATAAGATTTGCAATAAACCATTGGAATGCGGCTTCCATAATTGCTCTGAAGTATGTCATGTCGGTGAGTGTGGGGGTTGTGAGTTGTCGAAGCTAAGGACTTGCCCCTGTGGAAAGTCCTCGTTTTTGCTTCCATGCACAGAAGAAACACCGGCATGTGATGACACTTGCCTTAAAGTTTTAGAATGCGGACAGCACGTTTGCTATCAAAAGTGTCACAAAGACAAATGCGGAAgtTGTGTGGAAGTAGTAACAAAGACTTGTCAATGTGGATTACATACAAAGGAAGTTCAGTGCAAGAAACCTTTCCTCTGTGAAACCAAATGCAAACAGCTCAAAGATTGCAACAAACATCCTTGTAATCGTAAGTGTTGCGATGGTAATTGTCCTCCATGTGAGAAACCTTGTGGGAGGACACTCTCCTGTGGCACTCACAAGTGCAAGTCAGTGTGCCACAGAGGCCCATGCTACCCTTGCAATTTAACGGAGAAGGTTTTCTGTCGTTGTGGGGGTACTTTTGTGACAGTTCCATGTGGTAAAAAGAATAGGACACGTCCCCCAAAATGTCACAAGCCTTGTTTGTTACCACCTGATTGTCACCATCCAAAACGGGAGCATCACAACTGTCATTTCAATGATTGTCCACCTTGCAAGCAAGTTTGTAATAAATCGCGTGAAAGCTGTGCCCATAATTGCCCTGCACGCTGTCACGCTGCAATCACAGTAAAAATTGAAGGGAAGAAAGGATCCATGCCTTGGGAACAAACGGGGCCGCAATTTGAAGTCAAAGAATTTCCTTGTCCCCCTTGTAACGTTCCCGTATTAGTTACATGCTTAGGTGGACATGAGACTCGTTACTGGCCTTGTCATACAGCTGTGGCTTCCAGTTGTCAAAGACCATGTGGTAGAGTACTATTATGCGAAAATCACACTTGCAAGAAACTTTGCCACAATATTATAGCTGCTCCTGATAACATTAAGGCAGGTGAAAATTGTGACGTGTGTGAAAGCGAATGCCTAAAGGCTAGACCAGAAGGTTGTACGCACGCATGTCCGAAACCATGTCATCCGAATGAATGCCCGCCGTGCAAACAAATGCTGCGCATCAAATGCCACTGCAGCCTCAACCAGCCTTATGTACCTTGCAGTGAATGGAACAACATTGAAAACAGAGAACTGTTGCAGTGCTGTGGAAATCAATGTCCGAACAATTACGAGTGCGGGCATCGATGTCGATCCAGCTGTCATTCAGGGCCGTGCCCCAACCCCGAATCATGCAAGAAAAAAGTCAAAGTCTTCTGCAAAtgcaaaagaattaaaaaggaGTTTCCTTGTGAAACACTCAGAAAGGGTGAGGCCGTCATAAACTGCGATGAGATCTGCGAGCAAAAGAAAGAAGAGGAGAGAAAGCAAAAAGAGCTGGAGAGGGAGCAgaggaagaaagaagaagatttaaaaaatcagagaGAGCTTGAAAAGTACGAGAAAATGTTCCACGGTAAGAAAAAGAATCGAGAGCGCAAGCAAAAATCAGAGGTGGACGACTGCCCTATCTTTGGCTCGGTACTCTTCTTCATGGGCTTGTGGTCGAATGTTTGTGCTACATTTTACCGGATGTTGATAACTTCTGGCACTCACAAACCCCCATCATGTTACTTGGCAGACGATTACCACTACACATCCTTTTTCTATGTAAATACGTACACATTTGTGATACGATTTCAAATGCAATTACTTTTAGATCCATGTTTTATCTACCAATCTTCGGTTGGCGTTGCAAAGATGAAATTACCGAAATGGGCAGAGCCTTTTGCCGTAGGATTAGGTTCAGTCTTAATAGACTCTACGTACGATATAATCAGCATTAATTATCTGCACTGGACCTGGCACGACACAGATCCTAACATCGAAGATAGATTTTATTGGGTGCCTTGgaattcgttttattttcacGCTTGCTTCGCTGCAAGCTTTACTTTCTGGTTTCATTTTACAAGAAAGTTAATTTGCAAAACAAATGGAAAATGGGAACCCGACACGTAA
- Protein Sequence
- MSEYFKPPKQKSPWAIGRQQQQNRSTKVTSNNLKNSENKFKEATSKHQAAAQKYAKDYESSSEEEELESQHIIDKILEGYALGEADKENLSRTKNYLEDAFVSGAATCLICISSIKRNDSIWSCSECYCFFHLMCIQRWSKDTITQKKLALEGQVQVKKIKVAWGCPKCRHDYEPADIPTQYLCFCGKTTNPVFQSLLVPHSCGEKCGRSLKPECGHECVLLCHPGPCPPCPKTVTVKCYCGIQPPKVQRCSNKEWSCGNPCNKLLACKKHKCVQPCHSGECEPCSKKSIQKCLCGSSQKLRDCASPIWQCDKICNKPLECGFHNCSEVCHVGECGGCELSKLRTCPCGKSSFLLPCTEETPACDDTCLKVLECGQHVCYQKCHKDKCGSCVEVVTKTCQCGLHTKEVQCKKPFLCETKCKQLKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCGTHKCKSVCHRGPCYPCNLTEKVFCRCGGTFVTVPCGKKNRTRPPKCHKPCLLPPDCHHPKREHHNCHFNDCPPCKQVCNKSRESCAHNCPARCHAAITVKIEGKKGSMPWEQTGPQFEVKEFPCPPCNVPVLVTCLGGHETRYWPCHTAVASSCQRPCGRVLLCENHTCKKLCHNIIAAPDNIKAGENCDVCESECLKARPEGCTHACPKPCHPNECPPCKQMLRIKCHCSLNQPYVPCSEWNNIENRELLQCCGNQCPNNYECGHRCRSSCHSGPCPNPESCKKKVKVFCKCKRIKKEFPCETLRKGEAVINCDEICEQKKEEERKQKELEREQRKKEEDLKNQRELEKYEKMFHGKKKNRERKQKSEVDDCPIFGSVLFFMGLWSNVCATFYRMLITSGTHKPPSCYLADDYHYTSFFYVNTYTFVIRFQMQLLLDPCFIYQSSVGVAKMKLPKWAEPFAVGLGSVLIDSTYDIISINYLHWTWHDTDPNIEDRFYWVPWNSFYFHACFAASFTFWFHFTRKLICKTNGKWEPDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01258905;
- 90% Identity
- iTF_01258905;
- 80% Identity
- -