Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.0059 33 5.6 0.1 18 28 95 105 92 113 0.77

2 5 0.0043 24 6.1 0.2 20 34 148 162 138 164 0.80

3 5 0.14 8.1e+02 1.2 2.5 1 9 179 187 179 220 0.62

4 5 6.4e-05 0.36 11.9 0.0 17 35 230 247 225 248 0.80

5 5 0.066 3.7e+02 2.3 0.0 22 33 262 273 256 276 0.70

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.0059	33	5.6	0.1	18	28	95	105	92	113	0.77
2	5	0.0043	24	6.1	0.2	20	34	148	162	138	164	0.80
3	5	0.14	8.1e+02	1.2	2.5	1	9	179	187	179	220	0.62
4	5	6.4e-05	0.36	11.9	0.0	17	35	230	247	225	248	0.80
5	5	0.066	3.7e+02	2.3	0.0	22	33	262	273	256	276	0.70

Coding Sequence: ATGAGCGTAGCGACATTGGCTCCATGGCATACATTAAGCACCAAGAACCAAACTAATGTTGCGGAAGACTCGTCGAACGAGAGGGAAAGAACATTGAAACCCAAGGTACCAATGTTCTTACTAAACAACCTGCCTATGGACGAAATTATGGCATATGAGAAGTATTGTCAAGCAGAGACTTTCGAGACAACTCATTTTTTATCGTCTTTAACCAGCTTTCAAATGAACCACGAGCTGAATGAGAAGGCCAACGGTCAGCAAAATACTGCGGTTGGGAATCCAATGCACTCACATGTTTGTAACGAATGTGGCAAGTCGTTTTTATATAAACACCACCTGATGTCACACGAGAAGATGCACCTGCACCAAGAAGCCAAACCCCCACACGACAACAGTAAATTATTAAACACAAACAGAAACGAAGCAAACGTCAAAATTAGGCCACACGTTTGTAATAAGTGCGGAAAATCGTTTGTGTTGAAACACCATTTAACGTCCCACGAGAAGACGCATACTGGATTGAGGCCTCACGCGTGCGAATTCTGTGGAAAGACTTTCACTCATAAACATTGCTTGAACACGCATTTGCTTTTACATTCTAGTCAGAGACCATATGAGTGTGTTGAGTGCAAGAAACGTTTTACATTGAAACATCATTTAATATCGCATTCTCGGGTGCATAATAGGGATAAACCATTCATTTGTGAGGATTGTGGATTGGCTTTCGCCTTGAAAAGACATTTGGTTACGCATAGTAAATTTCATGCTGGGAAACGTCCATTTGTGTGCGATGAATGCGGGGAATCATTCACTCAAAAAGACCAGTTAGTAAGTAGATTGGTTATTCTATTGTAG
Protein Sequence: MSVATLAPWHTLSTKNQTNVAEDSSNERERTLKPKVPMFLLNNLPMDEIMAYEKYCQAETFETTHFLSSLTSFQMNHELNEKANGQQNTAVGNPMHSHVCNECGKSFLYKHHLMSHEKMHLHQEAKPPHDNSKLLNTNRNEANVKIRPHVCNKCGKSFVLKHHLTSHEKTHTGLRPHACEFCGKTFTHKHCLNTHLLLHSSQRPYECVECKKRFTLKHHLISHSRVHNRDKPFICEDCGLAFALKRHLVTHSKFHAGKRPFVCDECGESFTQKDQLVSRLVILL

Sequence clustering based on sequence similarity using MMseqs2