Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: T
Assembly: GCA_958336345.1
Location: OY284475.1:11148322-11164247[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0075 0.69 11.9 2.9 2 23 409 430 408 430 0.96

2 8 0.0016 0.15 14.0 3.8 1 23 436 458 436 458 0.98

3 8 0.0011 0.098 14.6 1.9 2 23 465 486 464 486 0.96

4 8 0.13 12 8.0 0.3 1 23 493 515 493 515 0.96

5 8 0.00022 0.021 16.7 3.7 1 23 521 543 521 543 0.98

6 8 0.063 5.8 9.0 1.1 1 23 550 572 550 572 0.97

7 8 0.0016 0.14 14.0 3.6 2 23 579 600 578 600 0.97

8 8 0.00029 0.027 16.3 2.8 3 23 608 629 606 629 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0075	0.69	11.9	2.9	2	23	409	430	408	430	0.96
2	8	0.0016	0.15	14.0	3.8	1	23	436	458	436	458	0.98
3	8	0.0011	0.098	14.6	1.9	2	23	465	486	464	486	0.96
4	8	0.13	12	8.0	0.3	1	23	493	515	493	515	0.96
5	8	0.00022	0.021	16.7	3.7	1	23	521	543	521	543	0.98
6	8	0.063	5.8	9.0	1.1	1	23	550	572	550	572	0.97
7	8	0.0016	0.14	14.0	3.6	2	23	579	600	578	600	0.97
8	8	0.00029	0.027	16.3	2.8	3	23	608	629	606	629	0.97

Sequence Information

Coding Sequence: ATGCCCTCAGGAACAACATGTTCAGTATTAAACTGCCATATGACATATGTAAAAGCAAAAAGACAagGAAAGACGTTCAGTCCCCAACAAAAATTAGTTGTACTTCAGTATGATGAAGTAAAGGTCGTAATTGCCAGAGGCTTATTTGCTAAATGGAAGCAACCTGTGTTTGTGGACtttgatcaaaaaataacaccGGCATTACTGAATAACATCATTGAAGCACTTTACGAAAAAGGTTTTGAAGTTATCGCGTGTGTTAGCGATTGTGGTTCCAGTAATATGGGCTTATTTCTACAATACAGAAAACTTTCATACACCACAGTAAAACTGGAACTGCTGAATTACTGTCGCACACAACTGCTGCAGCTTTGGCATTCTATTATGGTAACGATCCTGTGGCTGTGGCAACAAGCGAATTCATTGAAATTGTTTGATGTCATGAACTCGCATGTCCCGTACAATTCTGTTAACATTAAAGCAGCATACGGAATTCACTTGGATAAACAAAATGAGGTGTTGGATTCAATAACAAGAGGTGGATTAAACGATCATCCAACACCTCTTGCTGCATTATATCGTCTCAGACTGATTGTATTAGGAAAACCAGATCAGTTGCAATGCAATACTAATACTACAAATATAAGTGATGACAATTTTGTTATTGGAATGGTTATCAAAAATTCTGACCTAGGAATTGCAGCTATTAATCCCCAGCAGCCTTCAACTTCTTCTTTATCGGAAGTCATCCCAGAACGAACTAATTCTGATAAGAAGCATACATCAGTTCAGGTGCAAGCAGAAGAAGATGGTACCCAGTACTTAGCAGGATGGCTCGCTAAAACGTTTCACAGTTCACACCCTCATCTGGGCCAATACAGTTACAAAATCGTTACTTTCAGCTTACCTTCATGGGTAAAGCACCTTTCATTCGGAGGATTAGTAGTGCCTTCtgatgaatttgaaaaaactATAAAAGCATTTGACACAGAATTCATCAGATACATGGGAGATGGAATTAAATCAAATAACcttatcgttaaaaaattagTGAAGGCATTAGCATACAAATTTCCTGATGAAGACTTACACATCATTCGAGCaCGGCAGCGCCGGACTTCCGGAAATAAAGCTTTGAGCAAAGGTGCCGTTTATGATGACAAATTCCGAAAGCGTGAAAAATTGAAACGGCCCATATCTACAcgcaccgacgagaagccgttgaGCTGCAGGCTTTGCAACTTTAAATGTCGAGAATCTGGAAGTTTAAAGAGGCACATGCTAATacataccgacgagaagccgtacagttgtgatctttgcgattacaaatgtcgattAAAGGGGAATTTAAAACAGCACAAATtgacgcacaccggcgagaagccgttgaGTTGtggcctttgcgattataaatgtcgacaaCTTTCCAAGCTGAAGCTGCACATGCTGGTACACACGGGCGGCGAGAAACCATTCGCTTGTAAATTTTGTGATTATAAGAGCGGACAAGCTGTGGACATCAAGCGTCACGTATCGTCACACACAGGTGataagccgttcagttgtggcCTTTGCACTTACAAATGCCGAAGATCCTCAAGTTTGAAGCAGCATATGTTGATACACGAGGGCGGAGAGAAACCGTAtagttgtgatttttgcgattacAAGAGCCGATACTCCGCGGTTATGAGACGCCACACGttgatacacaccggcgagaaacgcATCAGTTGCAATCTCTGCAGTTACAAATGTCGACAGAACACGAGTTTGAAACTGCACATGCTTACGCACACAGGCGAGAAACCCTTCGGTTGTAAaatttgcgattacaagtgcagAAGGGTTAACGACTTGAAGCGTCACATGTTAACAATGCACGGACAAAAAGATGTATTCTTTATGActacaaattaa
Protein Sequence: MPSGTTCSVLNCHMTYVKAKRQGKTFSPQQKLVVLQYDEVKVVIARGLFAKWKQPVFVDFDQKITPALLNNIIEALYEKGFEVIACVSDCGSSNMGLFLQYRKLSYTTVKLELLNYCRTQLLQLWHSIMVTILWLWQQANSLKLFDVMNSHVPYNSVNIKAAYGIHLDKQNEVLDSITRGGLNDHPTPLAALYRLRLIVLGKPDQLQCNTNTTNISDDNFVIGMVIKNSDLGIAAINPQQPSTSSLSEVIPERTNSDKKHTSVQVQAEEDGTQYLAGWLAKTFHSSHPHLGQYSYKIVTFSLPSWVKHLSFGGLVVPSDEFEKTIKAFDTEFIRYMGDGIKSNNLIVKKLVKALAYKFPDEDLHIIRARQRRTSGNKALSKGAVYDDKFRKREKLKRPISTRTDEKPLSCRLCNFKCRESGSLKRHMLIHTDEKPYSCDLCDYKCRLKGNLKQHKLTHTGEKPLSCGLCDYKCRQLSKLKLHMLVHTGGEKPFACKFCDYKSGQAVDIKRHVSSHTGDKPFSCGLCTYKCRRSSSLKQHMLIHEGGEKPYSCDFCDYKSRYSAVMRRHTLIHTGEKRISCNLCSYKCRQNTSLKLHMLTHTGEKPFGCKICDYKCRRVNDLKRHMLTMHGQKDVFFMTTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -