Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: L
Assembly: GCA_958336345.1
Location: OY284479.1:2738964-2747907[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1e-05 0.00096 20.9 0.5 1 23 73 95 73 95 0.99

2 19 0.29 27 6.9 6.0 1 23 101 123 101 123 0.97

3 19 1e-05 0.00096 20.9 3.9 1 23 129 151 129 151 0.99

4 19 0.0019 0.17 13.8 1.2 1 23 157 179 157 179 0.97

5 19 0.00035 0.033 16.1 0.4 1 23 204 227 204 227 0.96

6 19 0.26 24 7.0 0.7 3 23 258 279 256 279 0.95

7 19 0.041 3.8 9.6 0.3 1 23 317 340 317 340 0.90

8 19 3 2.8e+02 3.7 1.7 2 23 423 444 422 444 0.95

9 19 0.093 8.5 8.5 0.0 2 23 461 482 461 482 0.94

10 19 0.00087 0.08 14.9 4.1 3 23 492 513 491 513 0.92

11 19 0.53 49 6.1 0.4 1 23 518 541 518 541 0.91

12 19 0.0016 0.14 14.1 0.6 1 23 602 625 602 625 0.96

13 19 6.6 6.1e+02 2.6 1.4 1 23 674 697 674 698 0.77

14 19 0.00042 0.038 15.9 4.5 2 23 709 730 708 730 0.97

15 19 0.0002 0.018 16.9 0.4 1 23 739 761 739 761 0.98

16 19 0.63 58 5.8 0.2 1 16 838 853 838 855 0.83

17 19 2.3 2.1e+02 4.1 0.2 3 23 931 951 929 951 0.94

18 19 0.013 1.2 11.2 0.1 1 23 959 981 959 981 0.95

19 19 0.02 1.8 10.6 2.1 1 23 988 1010 988 1010 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1e-05	0.00096	20.9	0.5	1	23	73	95	73	95	0.99
2	19	0.29	27	6.9	6.0	1	23	101	123	101	123	0.97
3	19	1e-05	0.00096	20.9	3.9	1	23	129	151	129	151	0.99
4	19	0.0019	0.17	13.8	1.2	1	23	157	179	157	179	0.97
5	19	0.00035	0.033	16.1	0.4	1	23	204	227	204	227	0.96
6	19	0.26	24	7.0	0.7	3	23	258	279	256	279	0.95
7	19	0.041	3.8	9.6	0.3	1	23	317	340	317	340	0.90
8	19	3	2.8e+02	3.7	1.7	2	23	423	444	422	444	0.95
9	19	0.093	8.5	8.5	0.0	2	23	461	482	461	482	0.94
10	19	0.00087	0.08	14.9	4.1	3	23	492	513	491	513	0.92
11	19	0.53	49	6.1	0.4	1	23	518	541	518	541	0.91
12	19	0.0016	0.14	14.1	0.6	1	23	602	625	602	625	0.96
13	19	6.6	6.1e+02	2.6	1.4	1	23	674	697	674	698	0.77
14	19	0.00042	0.038	15.9	4.5	2	23	709	730	708	730	0.97
15	19	0.0002	0.018	16.9	0.4	1	23	739	761	739	761	0.98
16	19	0.63	58	5.8	0.2	1	16	838	853	838	855	0.83
17	19	2.3	2.1e+02	4.1	0.2	3	23	931	951	929	951	0.94
18	19	0.013	1.2	11.2	0.1	1	23	959	981	959	981	0.95
19	19	0.02	1.8	10.6	2.1	1	23	988	1010	988	1010	0.97

Sequence Information

Coding Sequence: ATGTTGTTCAAAGGCAAAAGTTCGCGACTTGAGATGGTCATCGAAAAAATTCATTCCAATAAAGAAAACAGCGAAGTTACAGATTTAACTCCaggACAAGGAAGTTCTCCATCGAGCAGTGAACAATCATCACCTGGTAGTTGTCAAAGTTCAACTTTGAGCGACGCACCCGACGGAGATGAACCTTACACGATGGGAGCAACAGCTACTACACCATATGAATGTAATATTTGCAAGAGAGCTTTCGCGAGATCCTCGGTTTTAAGTAAGCACGTTCAGaCTCATACGGAACAACTGCAGTTTAGTTGTCCTTATTGTAGAAGACTGTTCAAGCATAAAAGGTCCAGGGATAGGCATACGAAGCTACATACCGGCGATAAAAAGTATAAATGTCTACATTGTGATTCGGCGTTCGCAAGGAGTGACCATTTGAAAATACATATGAAGACTCACGATAATAAAAAACCACATCAATGTGAGTTATGTAACAGGGGGTATAACACAGCAGCGGCGTTAGCATCTCACCAACAACACCACTCAAAAAAGGAACGTCATTGCGGAAGTAGCGCAAGCCATACAAGTGCCTTTAGCACCCCAAGCCCCGGAAATTTCCGGTGCTTACAGTGTTCGGAATCTTTTAGCAAAGCTGAGCTACTACAAaatcacCTCCTAATAAACCACAAAACCACCCTAACAGTCCAGCAAAATCAGTTACTCGAGCCTGTATTAAGCAACGTTTTAAAATCAAGCTTGGAATTGCCGAAAATCGCCTGCATGTACTGTGGAAAAGATTTTTTAAGCATGAACCAAATGTACCACCACATCAACACGGAACACAGCGCAATATTCAACAACACCCTCCCCCATGGTGTCAATTACACCCCTTTAGCGTCGCCAGGTGTCAACGATTTATCTCCGAAATTAACCAAACAAAATACTTCCCCGACGTACGCGTGCGACCGCTGCACCATGAAATTCGATTCACCTCAATCATTGAAGGAGCACTCGGAGAATATCCATTGGAAACCGGCCTTGGCCATCAACTTCGGGGGGCATTTAAAAGACTACCCTTACGAGCTCGCGCAGAACTCGGAAAAAATATTCGCGTCTCTCCAAGCGAAGCCAACCGATTTGAGCAGGAAACGAAGGCTGGACGAACCGAACGATCACAAACAAGAAAAGAGGAAGTTAGAGGAAACGTCCGCCGCCAAAAGAACATCCCCGTCTTCAGCTGGAAGCCCTTACGATACGAACGACAAACCCTGCATTTGCTCTTATTGTTACGTTCAGGTGCCGAACTTCAAGAGTTTCTTGACTCACATGGAAAGTCACGTCTCTTTAAATACGTCTAGCATTTCAAATGCGAACGCCTTCATCGGGTACTGTCCGATTTGCGGGGAACCAGGGAGAGACCCCATCGAATTTAGCAATCACATTTTCGGGCACGCCGTAACGAACGTGACCGGACGGTGTTGCCATCAATGCAAGAAGTCCTTCGAACAATTAGACCAACTACAGAAGCACCTCATCGACGTACACGCGCAAACCCTTTTTAAATGTGCTCTCTGCAGCGAAGTGTTTGAATCACAACTTGCGATACAGATGCATTTCAACAACAAACACTGTCACGAATGCAAGCATTACCGATGCAATTTTTGTCCTGATCAGTTCTTCCACGATCGTTTAACGGCCGAGTTGCACGTCTCCATGAAACATAGCACTCACCTACCATCGACGACAGCCTCCAAGCAACAAACGTACTCGACTTTCACAGAACTTGAAACGCGTTTGGCGTACCCCACGTTCCAATGTCCCTTTTGCCAGAAGGCTTTTAAAGATGAGTACCtgcaatacatacatatacttaAGGAGCATAACGACGGACGAGAGGGAGAAAATTACTTGCTGGAAGTGTCCGCCTTATCTCAGTTACACATTCCGCCCAGATCGCCAAGTTTCCCGTACAAATCACATTCCCCTCAAGATAGTTCGAAGGTGGAGCTGAAGTTGATGAACTGTTACAGTTGTGATATCTGCAATCGAACTGATATTAACAGTGAAGCGGAATTGACGGCCCACAAGAAACTGCATCACGCCAAGACGAAGGTCGGCCCGGTTAGTTTGCAGTGTGCGTATTGTAGTGAACATTGTAAGTCGCGCAGTGACTTGGAAAATCACATGAAAACGCACCAGGTCACGTGCGGGAAGGGTAAACACAAGTGCAATATTTGCGACGAGATTTTTTCTTCGGCGATTACCTTGGCGGATCATAAATTAACACACTGCAAGATAGTTTCGGGGAACAGTTGCACGCAGTGTAAGACGATACTAGTGGATGAACAGTGTTTCTACACGCACCAGCTACAACACAGTAATACCTCGGCGGTTTGCAAATCGAATTCGCAAATTTCCTTGCCGGCGAATTGCATCGTTTGTTGCCAAACTCTTCAGACTGACGTCGAGATAAAACTACACGCCAAGTTTCACTTGAGGCACCTGCTCCAGAAGGAGTACTTGTGCACCATATGCAGCAAAATGTTTGATAGTAACACTAAAATGGAGAAGAGCACCACCATTGATAAAACGAATGGGATTTCCGTGTCCATATGCAAGGATTGCATCAGCAATTCCGGGAATACGAGTTACCAAGTCACGCAAATCGAAACCAAGGATTTACTAAAGAACATGAAGCAGTACGCTTGTATTCAATGCCCCTTGACTTTCGAAAAGGAAGAAGACATTCAAGGGCATGCAGCGATGCACATCCTCAACGAAGGCACGAGTTTAGACTGTCACCTCTGTAGAAATGTTTTACCTTCGCCGTTGAAACTGCAAGCCCATCTCATCGAGCACAACTTCATGGGGATAGGGCAATTTCGGTGTTACGTGTGCTCTTCAGTGTTTACAACAGCCCCCGGTCTGCAGAGTCACATCGTAGGACATGGTTTAAACCACCGCCCTTACGAATGCTCGGAATGCAAAATGAAATTCTTCTTTGAAACCGAATTGGAAAACCATAGGTTTTCCCATATACTCCCCGCAGCACAAAAGGGGCCTTACACTAATAAGTGTAACCCCGATAATTACTACGATAAAGTAAAGGCAGAGaaactttataaaatatgtaattactgTTCGGGGTTGTATTTGGAGACGTACTTTGCCGAACATCTTGAGATATGCCCGTGCAAAGTTGAGATTAAAAAGGAAGATACGACAGTGGACGATATggaaaaaagtaaacaaaacgAAAGCCACGTGAAAAATAATCACGTGGATGAAACTGTTATAAATGAGGTCGAAACTAAAGTTGAACAGCAATTATAA
Protein Sequence: MLFKGKSSRLEMVIEKIHSNKENSEVTDLTPGQGSSPSSSEQSSPGSCQSSTLSDAPDGDEPYTMGATATTPYECNICKRAFARSSVLSKHVQTHTEQLQFSCPYCRRLFKHKRSRDRHTKLHTGDKKYKCLHCDSAFARSDHLKIHMKTHDNKKPHQCELCNRGYNTAAALASHQQHHSKKERHCGSSASHTSAFSTPSPGNFRCLQCSESFSKAELLQNHLLINHKTTLTVQQNQLLEPVLSNVLKSSLELPKIACMYCGKDFLSMNQMYHHINTEHSAIFNNTLPHGVNYTPLASPGVNDLSPKLTKQNTSPTYACDRCTMKFDSPQSLKEHSENIHWKPALAINFGGHLKDYPYELAQNSEKIFASLQAKPTDLSRKRRLDEPNDHKQEKRKLEETSAAKRTSPSSAGSPYDTNDKPCICSYCYVQVPNFKSFLTHMESHVSLNTSSISNANAFIGYCPICGEPGRDPIEFSNHIFGHAVTNVTGRCCHQCKKSFEQLDQLQKHLIDVHAQTLFKCALCSEVFESQLAIQMHFNNKHCHECKHYRCNFCPDQFFHDRLTAELHVSMKHSTHLPSTTASKQQTYSTFTELETRLAYPTFQCPFCQKAFKDEYLQYIHILKEHNDGREGENYLLEVSALSQLHIPPRSPSFPYKSHSPQDSSKVELKLMNCYSCDICNRTDINSEAELTAHKKLHHAKTKVGPVSLQCAYCSEHCKSRSDLENHMKTHQVTCGKGKHKCNICDEIFSSAITLADHKLTHCKIVSGNSCTQCKTILVDEQCFYTHQLQHSNTSAVCKSNSQISLPANCIVCCQTLQTDVEIKLHAKFHLRHLLQKEYLCTICSKMFDSNTKMEKSTTIDKTNGISVSICKDCISNSGNTSYQVTQIETKDLLKNMKQYACIQCPLTFEKEEDIQGHAAMHILNEGTSLDCHLCRNVLPSPLKLQAHLIEHNFMGIGQFRCYVCSSVFTTAPGLQSHIVGHGLNHRPYECSECKMKFFFETELENHRFSHILPAAQKGPYTNKCNPDNYYDKVKAEKLYKICNYCSGLYLETYFAEHLEICPCKVEIKKEDTTVDDMEKSKQNESHVKNNHVDETVINEVETKVEQQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258469;
90% Identity: iTF_01258469;
80% Identity: -