Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: ECU03_0790
Assembly: GCA_958336345.1
Location: OY284475.1:2256609-2263234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 2.3 2.1e+02 4.1 0.3 1 22 12 33 12 33 0.94

2 24 0.59 55 5.9 6.1 3 23 41 61 39 61 0.96

3 24 1.4 1.3e+02 4.7 0.4 1 21 175 195 175 196 0.93

4 24 0.084 7.7 8.6 0.4 3 23 204 225 203 225 0.92

5 24 0.0051 0.47 12.4 1.7 3 23 231 251 230 251 0.97

6 24 4.6 4.3e+02 3.1 1.3 1 12 257 268 257 271 0.90

7 24 0.014 1.3 11.1 2.6 1 23 330 352 330 352 0.97

8 24 0.0057 0.52 12.3 3.1 2 23 359 380 358 380 0.96

9 24 0.0019 0.18 13.8 3.1 2 23 387 408 386 408 0.97

10 24 0.0014 0.13 14.2 1.8 2 23 415 436 415 436 0.98

11 24 0.0015 0.14 14.1 1.1 1 23 442 464 442 464 0.98

12 24 0.061 5.6 9.0 3.6 1 23 470 492 470 492 0.99

13 24 0.037 3.4 9.7 2.9 1 23 528 550 528 550 0.98

14 24 0.53 49 6.1 1.2 1 23 556 579 556 579 0.92

15 24 0.00046 0.042 15.7 2.3 1 23 729 751 729 751 0.98

16 24 0.0068 0.62 12.0 0.2 1 23 755 777 755 777 0.98

17 24 1.9 1.7e+02 4.3 1.6 1 23 783 806 783 806 0.95

18 24 0.061 5.6 9.0 1.5 1 23 813 835 813 835 0.95

19 24 0.014 1.3 11.1 2.2 1 23 841 864 841 864 0.94

20 24 4.6e-05 0.0042 18.9 1.8 1 23 875 897 875 897 0.98

21 24 0.02 1.8 10.6 0.2 3 23 904 924 902 924 0.97

22 24 0.0045 0.42 12.6 0.3 1 23 930 952 930 952 0.97

23 24 5.1e-06 0.00047 21.9 0.4 1 23 958 980 958 980 0.98

24 24 0.0015 0.14 14.1 0.2 1 22 986 1007 986 1007 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	2.3	2.1e+02	4.1	0.3	1	22	12	33	12	33	0.94
2	24	0.59	55	5.9	6.1	3	23	41	61	39	61	0.96
3	24	1.4	1.3e+02	4.7	0.4	1	21	175	195	175	196	0.93
4	24	0.084	7.7	8.6	0.4	3	23	204	225	203	225	0.92
5	24	0.0051	0.47	12.4	1.7	3	23	231	251	230	251	0.97
6	24	4.6	4.3e+02	3.1	1.3	1	12	257	268	257	271	0.90
7	24	0.014	1.3	11.1	2.6	1	23	330	352	330	352	0.97
8	24	0.0057	0.52	12.3	3.1	2	23	359	380	358	380	0.96
9	24	0.0019	0.18	13.8	3.1	2	23	387	408	386	408	0.97
10	24	0.0014	0.13	14.2	1.8	2	23	415	436	415	436	0.98
11	24	0.0015	0.14	14.1	1.1	1	23	442	464	442	464	0.98
12	24	0.061	5.6	9.0	3.6	1	23	470	492	470	492	0.99
13	24	0.037	3.4	9.7	2.9	1	23	528	550	528	550	0.98
14	24	0.53	49	6.1	1.2	1	23	556	579	556	579	0.92
15	24	0.00046	0.042	15.7	2.3	1	23	729	751	729	751	0.98
16	24	0.0068	0.62	12.0	0.2	1	23	755	777	755	777	0.98
17	24	1.9	1.7e+02	4.3	1.6	1	23	783	806	783	806	0.95
18	24	0.061	5.6	9.0	1.5	1	23	813	835	813	835	0.95
19	24	0.014	1.3	11.1	2.2	1	23	841	864	841	864	0.94
20	24	4.6e-05	0.0042	18.9	1.8	1	23	875	897	875	897	0.98
21	24	0.02	1.8	10.6	0.2	3	23	904	924	902	924	0.97
22	24	0.0045	0.42	12.6	0.3	1	23	930	952	930	952	0.97
23	24	5.1e-06	0.00047	21.9	0.4	1	23	958	980	958	980	0.98
24	24	0.0015	0.14	14.1	0.2	1	22	986	1007	986	1007	0.93

Sequence Information

Coding Sequence: ATGGATCCCGATTTAGTGGCGAAATCGTCCGGATACACCTGCGAGGTGTGCCTGCAAATATTCCTCTCGCAGCGGGAATTCGTCGAGCACTACCGCAAAAAGCGCAACTACCAAATCCACTGCTGCAATTGCGACTCGTCCTTCGACACGATCACCGAACTGTTCGAGCACCATCGCACGCACAACATCCTCACGAACAACTTCGCGACGAAAATAGTTCACGTGAACAAGCAGGAGGGGATCGTGTCCTTGGAGAACAAGTTCAGTTGTTTCCACGATCACACCTACGCGTACACTCGGGAGTTCTTGCTTAAAGAAAAGAGGCGCCTATTCGAGGAGAAAAAGATGCTCGACGTGATCGTCGGTAGTGATCAGTATTCCGGGGGGAATTTGCAGCCCCCCGTCGTCGCGTTCCTTCCCGCGGGATTCTCCCAGACGTCCGACGAGGTCGATCCTCTGGATTCGACCTCTCTGGGCTACATCATCCTGAATCCTTCGCTGAACGACACCGAAAGGACTCATTATAAGTGCCTCAACTGCGAACAGCTCTTCATCAACAAGCTCGTGTTTTTCAGGCACATCGCCAAGGACAAATGTTTCATACGCAACTGCGACGTGTGCCTGGAGGTTTTCAGGAAAAACAGCGACTTCTACGAGCACTACGTTTCGACGCATTCCGGACGTGGGATCTGCAAGTTGTGCTTTCGCACTTTCGTCAACGACAGGAACGTCAAGTCGCACATGCAGAGGCACTTGGATCTCTTTAATTACCGTTGCGGACAGTGCAGTAAAGGCTTTTATACGGAAGgatttaaaatagaaattaacGACGACGAAGAAGAAGGGATGGAATACTACAACATGTCGCAGTCAGAAAGTGAGGTTAAACAACCAACTCGTCCGAAGACTAAGGACGGGCGTGAGCTTCAAACCGGGTTGGCACCGAAGCGAGAAGCCCCCAAACAAGTGAACGCGAACGCCCGTCAATTCAACTGCAATCTCTGCGATTACAAGAGCAACTACCGCGCGAATTTCAAGCGGCACGCTTACActcacaccggcgagaagccgctcAAGTGCGACTTCTGCGATTACCGCTGCGTCCAGCCTGTAACTCTGAAGCGGCACAAGTACACGCACACGGGCGAGCGACCTTTAAAGTGTAACCTGTGCGATTACAAGGGCACTCACTCGACCGATTTGAAGAACCACATGTTCACtcacaccggcgaaaagccaCGTAAATGCACCGTTTGCGATTTTAGATGCAGGCAAGCGGGCGGCCTGAGCCAACACATGCTGACGCACAAGGCGGAAAGACCGTTTCGTTGTACCGCGTGCGCTTTCAGCAGTACCTCGTCGTCTTCGTTAAAGGTACACTTGCGCACGCATACGGGCGAGAAGCCGTACAAATGCGATCAGTGCTCGTACTCGTGCTCGAGAGGCGGGCGGTTGAAGCTGCATAAGCTCACGCATTCCGGCGATAAGCCGCTCAAATGTGGCTCGTGCGCGTACACTTGCACCAAGACGAGGTATTTAAAGTCGCACGTGTCGCACATGAACCACGCCACCGGGCGGCCGTATAAGTGCTGCGTTTGCGAGTATGAATCGGCGAACGCCGTGAGTTTCAAGAAGCACATGTTCAAGCACGGCGACGAAGAGACGTATCAATGTCAGAGTTGCGATTATCGATGCGAAAATGTCGGAAGCTTCGTGCAACACGTCGAAGAAACTCACCCAGACTTCTTCAAACGCTATTGGGCGATTTCAAAAAACCAAAGGCACCTGCCAGGCCCCCAACGACCGGACTTCGGCTGCGCGGTAATCAAAGAAGAAACGATCGTCTCCACTCTGGGCGGTGAGGGTTTCCAAGGTAAGGCAACAcggaaaaagataaaaaaagaaaaaccgcGCTGGGTTTTGCCTCCCGGAGGCATTAGAAGGAGTCTCCGGGTGGAGAAGCTTAAGGCCGAGCTGGGCATCGAGGAGAAGGACGCCAAGGGGATACCTAAGCGCCACCAGATTAAGGTGGAAGTCGAGGAGGCGATTCGTGTCCTCGTGCCCGCCTTCAAGTGCAGGATTTGCAAGGACGGCGTGAAGATGAATGTGCTGGAGTTTAAAGCGCACTACCAGACGCAGCACGAAGGCACGAAATTGCCGAGGACCGCGAGGTACCTGCACCTGTACACCTGCGATATCTGCGCCAAGTTCTTCAAGTGCTGGAAGAATCTTCAAAATCACATGGAAATCCACAACAATATTTACGATTGCGAATTGTGCGGGGTGAATTACAAGAGGGTCTTGGACTACATACTGCACATGCGCTCGCACTGCGACGAGGAAATTTTCAAGTGTATTTACTGTGATTATTGCACGTCGAGTATAAACGAGATCACCGTCCACGTGAACATGAAGCACGAGATCATCAACCACAAGTACATCTGCGAGATTTGCCACAAGGGTTTCGATATGTTCACCTGGTTTAAAGAGCACGGCAACTaccacaccggcgagaagcctttcAAATGCGGGCTCTGCGATAAAAGTTTTTTGTACACGCGCCACCTTACGGCTCATAGGATCTACGTCCACAAGCAAAGCGCGCCGGTGGTTTTCTACGGGTACGAATGCGTAATCTGCGGGAAGAAGTACCAACATAGAAATAGCCTGAAGCTGCACATGAATATCCACACTGGCCAAGTGGTGATATGCGATGTGTGCGGCAAGCAACTCTCGAGCATGGAGAAGCTCAAGTTTCACATGCGCGTCCACACTGGGTACAAGCCGTTCAAGTGTGGCTATTGCGAGAAGGCTTTCACCAAAAAACCGATCCTCGTCGAACACGAACGCATACACACGGGCGCCAAACCGTACGTGTGTGGACATTGCGAGAGGCCATTCTCTCAACGCTCGAGTTTGGTCATACACATTCGGGGACACACGGGGGAACGACCATTCGCCTGTCACATTTGTGGCAAGGCCTTCGTTGCCAGGGCGATGCtcaatttgcattttaaaacgTGCAAGGGGACTTACTGA
Protein Sequence: MDPDLVAKSSGYTCEVCLQIFLSQREFVEHYRKKRNYQIHCCNCDSSFDTITELFEHHRTHNILTNNFATKIVHVNKQEGIVSLENKFSCFHDHTYAYTREFLLKEKRRLFEEKKMLDVIVGSDQYSGGNLQPPVVAFLPAGFSQTSDEVDPLDSTSLGYIILNPSLNDTERTHYKCLNCEQLFINKLVFFRHIAKDKCFIRNCDVCLEVFRKNSDFYEHYVSTHSGRGICKLCFRTFVNDRNVKSHMQRHLDLFNYRCGQCSKGFYTEGFKIEINDDEEEGMEYYNMSQSESEVKQPTRPKTKDGRELQTGLAPKREAPKQVNANARQFNCNLCDYKSNYRANFKRHAYTHTGEKPLKCDFCDYRCVQPVTLKRHKYTHTGERPLKCNLCDYKGTHSTDLKNHMFTHTGEKPRKCTVCDFRCRQAGGLSQHMLTHKAERPFRCTACAFSSTSSSSLKVHLRTHTGEKPYKCDQCSYSCSRGGRLKLHKLTHSGDKPLKCGSCAYTCTKTRYLKSHVSHMNHATGRPYKCCVCEYESANAVSFKKHMFKHGDEETYQCQSCDYRCENVGSFVQHVEETHPDFFKRYWAISKNQRHLPGPQRPDFGCAVIKEETIVSTLGGEGFQGKATRKKIKKEKPRWVLPPGGIRRSLRVEKLKAELGIEEKDAKGIPKRHQIKVEVEEAIRVLVPAFKCRICKDGVKMNVLEFKAHYQTQHEGTKLPRTARYLHLYTCDICAKFFKCWKNLQNHMEIHNNIYDCELCGVNYKRVLDYILHMRSHCDEEIFKCIYCDYCTSSINEITVHVNMKHEIINHKYICEICHKGFDMFTWFKEHGNYHTGEKPFKCGLCDKSFLYTRHLTAHRIYVHKQSAPVVFYGYECVICGKKYQHRNSLKLHMNIHTGQVVICDVCGKQLSSMEKLKFHMRVHTGYKPFKCGYCEKAFTKKPILVEHERIHTGAKPYVCGHCERPFSQRSSLVIHIRGHTGERPFACHICGKAFVARAMLNLHFKTCKGTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -