Dpar000805.1
Basic Information
- Insect
- Dorcus parallelipipedus
- Gene Symbol
- ZNF711
- Assembly
- GCA_958336345.1
- Location
- OY284475.1:5690559-5699011[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 31 0.052 4.8 9.3 4.4 5 23 45 63 44 63 0.97 2 31 0.33 31 6.7 5.4 2 23 70 91 69 91 0.97 3 31 0.0015 0.14 14.1 3.1 1 23 117 139 117 139 0.99 4 31 0.012 1.1 11.2 1.2 1 23 145 168 145 168 0.96 5 31 0.78 72 5.5 0.6 5 23 175 193 174 193 0.88 6 31 0.0029 0.27 13.2 4.5 1 23 214 236 214 236 0.98 7 31 0.0046 0.43 12.6 4.0 1 23 242 264 242 264 0.97 8 31 0.0039 0.36 12.8 5.1 2 23 271 292 270 292 0.97 9 31 0.022 2 10.4 0.3 2 20 299 317 298 319 0.93 10 31 0.045 4.2 9.5 6.0 1 23 354 376 354 376 0.97 11 31 0.01 0.92 11.5 3.9 2 23 427 448 427 448 0.98 12 31 2 1.9e+02 4.2 0.1 5 17 471 483 470 484 0.90 13 31 0.37 34 6.6 1.8 5 23 532 550 531 550 0.96 14 31 0.51 47 6.1 2.5 5 23 557 576 556 576 0.80 15 31 0.02 1.8 10.6 1.6 1 23 604 626 604 626 0.98 16 31 0.11 10 8.2 4.3 1 23 632 654 632 654 0.98 17 31 0.00026 0.024 16.5 0.4 2 23 670 691 669 691 0.97 18 31 0.00056 0.052 15.4 1.0 1 23 697 719 697 719 0.98 19 31 3.2e-05 0.003 19.4 3.3 1 23 725 747 725 747 0.99 20 31 0.026 2.4 10.2 7.0 1 23 753 775 753 775 0.98 21 31 0.00068 0.063 15.2 1.6 3 23 783 803 782 803 0.99 22 31 1.4 1.3e+02 4.8 0.8 1 15 809 823 809 823 0.94 23 31 2.2e-05 0.002 19.9 4.5 1 23 830 852 830 852 0.99 24 31 0.25 23 7.1 2.2 1 23 876 898 876 898 0.98 25 31 0.16 15 7.7 1.4 1 23 904 926 904 926 0.98 26 31 0.00043 0.039 15.8 1.5 3 23 943 963 941 963 0.96 27 31 0.00038 0.035 16.0 0.9 1 23 969 991 969 991 0.98 28 31 0.00016 0.014 17.2 4.2 1 23 997 1019 997 1019 0.99 29 31 1.1e-05 0.001 20.8 1.8 1 23 1025 1047 1025 1047 0.98 30 31 0.00016 0.015 17.2 2.4 1 23 1053 1075 1053 1075 0.98 31 31 0.0019 0.17 13.8 5.4 1 23 1081 1103 1081 1103 0.98
Sequence Information
- Coding Sequence
- ATGTTGACGCACGCCCAAGAAAAATCGCTAAAGAAAAAGATTCTAAGCTTAAAGCAACACTTCCCAACCTACAGCGATGAAAAGCTTATCTGCGTCAAAGAAGAGTCGCCAAGAGTTTACAAAGCACGCGGACACTGCAGCTACGCCTGCAGCAGACTGGGGCACTTGAAAAGACACATGTTCACTCACACCGGAGAAAAGCCGATCCAATGCGACCTTTGCCACTATAAATGTAAGGGGATGTACAGATTAAATAAGCACATGTACACCCACGCCAGCGTGACACCCTTCAAGTTGCCCATCAAGCGAGAGCAGCCTGGCAACCGAAAACAAATCGGCTCGAAGCCGTACCAATGTGATCTGTGCGGCGATAAATTCGTCCACACCGTTCATTTAAAATCGCATATAATGAGACATACCGGCGAAAAACCGTTCGCATGTGATTTATGCGATTACAGGAGCAGACAAATGGGGACGTTAAACAGACACCGGCTGAAGAaacacaccggtgagaagcgcCCCAAATGCAGTATCTGCGGCTTCAGGCCTGCGTGCCTGAAGAAACACATGGTGACGCACACCGGCGATTTCCAGCTCAAGAAAGGGCAAGCGATGACAAGTTCTTCCACAAATTCGAAGTTCCGCTGCGATCATTGCGCTTACGTGTGTACGAACGCGACGAGTTTAAGAAGACACGTCTacacgcacaccggcgagaagccattcGAATGCGATCTCTGCGACTACAAGTGCACTCGCATGTACCTGCTGAAAAGGCACAGGTACATCCACGCCAGCGTGAAACCTCTGAAGTGTCATCTATGCGATTATAGGTGCATTACGAAGTACAGTTTGAACACGCACGTGCAGTCTCACCCCGAGTTCGAGCCGTCCCAGTGCGAGTCCTGCGGCGAAAAATTCGCCAACGCCGAATTCTTGCAGTCGCACAAGTCCAAATACACCAGCGAGTTTCCCTTCAAGTGCAACCTTTACAAACACCAGTCTGGCAACAACGTCAAAAAGCTGAACGCTTTCGACAAGAAAACGACCAGGAAGAGGTTCAAGTGTCACATCTGTTGTCAGCTTTTTAGTCATTCCGTAAATTTAAAACGGCACGTGGCGATACATACCGGTGAGAAACGTTTTAGGTGCAACGTGTTTTGTACACCAAACAAGAACGCCCTCTCAAATGCGAATTTTGCGATTACACGAGCACCGTTCCGCGCAATTTTAAAAGGCATACGTACACGCATACCGAGGATAAACGGAAAGACCCCCGAGTGCAACGAATGCGACTATAGGTGCGTCTACCGAAAACAACGGAAAGAACACATGCGCACCCACGTCACCTTGAAACCTCTTAAATGCAAGTTGTATGACAACAGCGGCTCGTTGCCTTTCCAATATGATCAGTGCGACAAAAAATTCAGCATGCCTACAAACCTGAAGTCGTACATGTTGATACATAGCGGTGAGAAACCGTACGAATGCAACTACTGCTATTACAAGTGTAAGTCGTTGGGTAAGTCATCGACGAcgacacaccggcgagaagctgCCGCAATGCAAGATCTGCGTCTAGGTGAGAGCAACTACTGCTTTTACAAGTGTAAGTCTTTGGGAGCTCTGAACAGTCATCGACGAcgacacaccggcgagaagctgCCGCAATGCAAGATCTGCGGTATGCGGTCCTCGTGCTTGAAGAAGCACATGATGTCGaggcacaccgacgagaaaccgttcaagCGCGACCTGTGCGACTTACGGTTTCGTCCGCTTGTGTGTATCAAACGAGGACCTCACTCTTTCAAATGCGAACTTTGCGATTACACGAGCACGATTTCGCGAAATTTTTTAAGACATGCGTACACACACACCGAGGAGAAACCGTTCCGATGTAAAACTTGTTCCTACCAGTGCTTCCAAGCTAAGGAATTCAGGGCCCACGTGTTAACACATGGGGGCGAGAAACCCCAAGGAAAACCCTCCCGTTACAAGCCAGTCCAATGCGACCGCTGCGGCCGGCAACTTACGAGCGCCGTTCACTTGAAAGCGCACATGCTTAtacacacgggcgagaagcctTACAAATGCGATCTCTGCGATTACAGGAGCAGGCAATCGGGGACGTTAAACACGCATCGGCTGATACACAcgggcgagaaaccgttcaagTGTGACCTCTGTGATTATAGGTGCGCGTCGAAAGGTTCCCTGAGGAAGCACATTAAGACACATTCTGGCGTGAAACCACACAAGTGCCATCTCTGTAAGTATGAGGGAAGAACAGCGAGGCATCTTAAGATGCATATACGTTCACACACCGACGAGAGACCGCACGGTTGCAGCACTTGCTTTCGGAAATTTAAGAGCCCCAGGGACTTGAAGAGGCATGCGCTCACGCACACCGGCGATAAACCGTTTAAATGCGACCTCTGTGATTACCGTTCTACGCAAAGAAGTAATGGTGGCTCCAAAAAGCGCTTCAAATGCGGACGCTGCGACCACGAGTTTACCAGactgagaaatttaaaaaggcaCATGTCGACACACGCCAGCAGAAAATCCTTCGATTGCGACGAATGCGATTACAATGTGTGTGTCAAACGAGGATCTCGCTCTTTCAAATGCGAACTTTGCTATTACACGAGCACGATTTCGCGAAATTTTTTAAGACATGCGTACACACACACCGAGGAGAAACCGTTTCGATGTGATACCTGTCCCTACCAGTGCTTCCAAGCTAAGGAATTCGGGGCTCACGTGTTAACACACGGGGGCGAAAAGCCCCAAGAGAAACCCTACCGCTACAAACCGGTCCATTGCGACCGCTGCGGCCGGCGACTTACGAACGCCGTTCACTTGAAAGCGCACATGCTTATtcacacgggcgagaagcccTACAAATGCGACCTCTGCGATTACAGGAGCAGGCAGTCGGGATCGTTGAACACGCATCGGCTGATACACACGGGCGAGAAACGGTTCAAGTGTGACCTCTGTGATTATAGGTGCGCGTCGAAAGGTTCCCTCAGGCACCACATAATGACGCATTCTGACGTGAAACCGCACAAGTGCAACCTGTGCGATTATAGAGTGAGCACGGCGGGGAACCTTAGGTCTCACATGCGTTcacataccggcgagaaaccgtacAGTTGCAGTACGTGCTTTTGGAAGTTTAAGAGCCCCAAGGATTTGAGGAGGCATGTATTCACgcataccggcgagaaacctTTCAAATGTGACTACTGTAGTTATCGTTCCACCCACAGCAGTAACGTAAAGACGCACATGTCgaaacataaattttaa
- Protein Sequence
- MLTHAQEKSLKKKILSLKQHFPTYSDEKLICVKEESPRVYKARGHCSYACSRLGHLKRHMFTHTGEKPIQCDLCHYKCKGMYRLNKHMYTHASVTPFKLPIKREQPGNRKQIGSKPYQCDLCGDKFVHTVHLKSHIMRHTGEKPFACDLCDYRSRQMGTLNRHRLKKHTGEKRPKCSICGFRPACLKKHMVTHTGDFQLKKGQAMTSSSTNSKFRCDHCAYVCTNATSLRRHVYTHTGEKPFECDLCDYKCTRMYLLKRHRYIHASVKPLKCHLCDYRCITKYSLNTHVQSHPEFEPSQCESCGEKFANAEFLQSHKSKYTSEFPFKCNLYKHQSGNNVKKLNAFDKKTTRKRFKCHICCQLFSHSVNLKRHVAIHTGEKRFRCNVFCTPNKNALSNANFAITRAPFRAILKGIRTRIPRINGKTPECNECDYRCVYRKQRKEHMRTHVTLKPLKCKLYDNSGSLPFQYDQCDKKFSMPTNLKSYMLIHSGEKPYECNYCYYKCKSLGKSSTTTHRREAAAMQDLRLGESNYCFYKCKSLGALNSHRRRHTGEKLPQCKICGMRSSCLKKHMMSRHTDEKPFKRDLCDLRFRPLVCIKRGPHSFKCELCDYTSTISRNFLRHAYTHTEEKPFRCKTCSYQCFQAKEFRAHVLTHGGEKPQGKPSRYKPVQCDRCGRQLTSAVHLKAHMLIHTGEKPYKCDLCDYRSRQSGTLNTHRLIHTGEKPFKCDLCDYRCASKGSLRKHIKTHSGVKPHKCHLCKYEGRTARHLKMHIRSHTDERPHGCSTCFRKFKSPRDLKRHALTHTGDKPFKCDLCDYRSTQRSNGGSKKRFKCGRCDHEFTRLRNLKRHMSTHASRKSFDCDECDYNVCVKRGSRSFKCELCYYTSTISRNFLRHAYTHTEEKPFRCDTCPYQCFQAKEFGAHVLTHGGEKPQEKPYRYKPVHCDRCGRRLTNAVHLKAHMLIHTGEKPYKCDLCDYRSRQSGSLNTHRLIHTGEKRFKCDLCDYRCASKGSLRHHIMTHSDVKPHKCNLCDYRVSTAGNLRSHMRSHTGEKPYSCSTCFWKFKSPKDLRRHVFTHTGEKPFKCDYCSYRSTHSSNVKTHMSKHKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -