Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284475.1:2228136-2236293[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.0018 0.17 13.8 0.1 1 23 490 512 490 512 0.97

2 29 0.0062 0.57 12.2 1.8 1 23 516 538 516 539 0.96

3 29 0.1 9.4 8.3 1.7 1 23 544 566 544 566 0.97

4 29 0.67 62 5.8 1.2 1 23 572 596 572 596 0.96

5 29 0.01 0.97 11.4 1.1 1 21 602 622 602 625 0.90

6 29 0.073 6.7 8.8 0.3 2 23 631 652 630 652 0.96

7 29 0.00034 0.031 16.1 0.2 3 23 659 679 657 679 0.95

8 29 6.3e-05 0.0058 18.4 3.7 1 23 685 707 685 707 0.98

9 29 7.5e-06 0.00069 21.3 2.3 1 23 713 735 713 735 0.97

10 29 2 1.9e+02 4.3 0.0 1 23 853 875 853 875 0.94

11 29 0.06 5.5 9.1 2.5 1 23 879 901 879 902 0.96

12 29 0.014 1.3 11.1 0.3 1 23 907 929 907 929 0.97

13 29 2.8 2.5e+02 3.8 1.5 1 23 935 959 935 959 0.93

14 29 0.00076 0.07 15.0 1.1 1 23 965 988 965 988 0.97

15 29 0.0013 0.12 14.3 0.8 1 23 996 1018 996 1018 0.97

16 29 0.00013 0.012 17.5 0.2 2 23 1024 1045 1023 1045 0.95

17 29 5.3e-05 0.0049 18.7 1.2 2 23 1052 1073 1051 1073 0.97

18 29 6.8e-08 6.2e-06 27.8 1.2 1 23 1079 1101 1079 1101 0.97

19 29 6.6 6.1e+02 2.6 2.0 1 21 1107 1127 1107 1128 0.93

20 29 0.001 0.096 14.6 0.1 1 23 1245 1267 1245 1267 0.97

21 29 0.013 1.2 11.1 0.3 1 23 1271 1293 1271 1293 0.97

22 29 0.014 1.3 11.0 0.9 1 23 1299 1321 1299 1321 0.98

23 29 0.006 0.55 12.2 1.3 1 23 1327 1351 1327 1351 0.95

24 29 0.014 1.3 11.1 0.5 1 23 1357 1380 1357 1380 0.96

25 29 0.25 23 7.1 1.5 2 23 1387 1408 1386 1408 0.94

26 29 0.00025 0.023 16.5 0.5 2 23 1414 1435 1413 1435 0.96

27 29 4.2e-05 0.0039 19.0 2.0 1 23 1441 1463 1441 1463 0.99

28 29 8.9e-06 0.00082 21.1 0.6 1 23 1469 1491 1469 1491 0.97

29 29 0.001 0.093 14.7 2.6 1 22 1497 1518 1497 1518 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.0018	0.17	13.8	0.1	1	23	490	512	490	512	0.97
2	29	0.0062	0.57	12.2	1.8	1	23	516	538	516	539	0.96
3	29	0.1	9.4	8.3	1.7	1	23	544	566	544	566	0.97
4	29	0.67	62	5.8	1.2	1	23	572	596	572	596	0.96
5	29	0.01	0.97	11.4	1.1	1	21	602	622	602	625	0.90
6	29	0.073	6.7	8.8	0.3	2	23	631	652	630	652	0.96
7	29	0.00034	0.031	16.1	0.2	3	23	659	679	657	679	0.95
8	29	6.3e-05	0.0058	18.4	3.7	1	23	685	707	685	707	0.98
9	29	7.5e-06	0.00069	21.3	2.3	1	23	713	735	713	735	0.97
10	29	2	1.9e+02	4.3	0.0	1	23	853	875	853	875	0.94
11	29	0.06	5.5	9.1	2.5	1	23	879	901	879	902	0.96
12	29	0.014	1.3	11.1	0.3	1	23	907	929	907	929	0.97
13	29	2.8	2.5e+02	3.8	1.5	1	23	935	959	935	959	0.93
14	29	0.00076	0.07	15.0	1.1	1	23	965	988	965	988	0.97
15	29	0.0013	0.12	14.3	0.8	1	23	996	1018	996	1018	0.97
16	29	0.00013	0.012	17.5	0.2	2	23	1024	1045	1023	1045	0.95
17	29	5.3e-05	0.0049	18.7	1.2	2	23	1052	1073	1051	1073	0.97
18	29	6.8e-08	6.2e-06	27.8	1.2	1	23	1079	1101	1079	1101	0.97
19	29	6.6	6.1e+02	2.6	2.0	1	21	1107	1127	1107	1128	0.93
20	29	0.001	0.096	14.6	0.1	1	23	1245	1267	1245	1267	0.97
21	29	0.013	1.2	11.1	0.3	1	23	1271	1293	1271	1293	0.97
22	29	0.014	1.3	11.0	0.9	1	23	1299	1321	1299	1321	0.98
23	29	0.006	0.55	12.2	1.3	1	23	1327	1351	1327	1351	0.95
24	29	0.014	1.3	11.1	0.5	1	23	1357	1380	1357	1380	0.96
25	29	0.25	23	7.1	1.5	2	23	1387	1408	1386	1408	0.94
26	29	0.00025	0.023	16.5	0.5	2	23	1414	1435	1413	1435	0.96
27	29	4.2e-05	0.0039	19.0	2.0	1	23	1441	1463	1441	1463	0.99
28	29	8.9e-06	0.00082	21.1	0.6	1	23	1469	1491	1469	1491	0.97
29	29	0.001	0.093	14.7	2.6	1	22	1497	1518	1497	1518	0.95

Sequence Information

Coding Sequence: ATGAATCCTACGATTCCCAGATTATACGGGCTCCCTAAATCCCATAAACCGGACTGCCCTATAAGACCCGTTGTATCTTTCACGGGCTCACCAGCCTCCcctatttctaaatttctagtCAATACTTTTAAATGTCATTTAAATCTACAAACTAAATTTAGCTTAACTAACTCACAACATTTGATTCAGAAATTACAATCCGTTCAACTTTCGAAGAATAGCATCTTAGTGTCCTTCGATGTGACAAACCTATTCACCTCCATCCCAGTCACAGAAGCTATCGGTATCGTGAATAATCTTCTTACATCCTCTGATCTCTCTGATTCCCGTTCTCAATTCTTACAATCATTGTTAAGAATAACTCTACagcaaaatttctttattttcaataaaaaatattatacacAAACTGATGGCCTGGCTATGGGTTGTAGCCTTTCCCCCCTTCTTGCCGACCTATTTATGGACAAGCttgaaaacattttcttttcttctaacAGCAGTCACAAAGACCACATCCAATTCTATGGGAGATACGTGGACGACATCTTAATTATCTATGATGGCCCTTTGACCGCTATTCATTCACTGCTATCCGAGTTTAATGCTTTACACCATAAAATTAAGTTTACTCTAGAAACGGAAAAAAACTGTTCTATAAATTTCTTAGACCTAACCATTTCCAAATCTAATAATTCTCTGCATTACAAAATTTACAGGAAACCTACCTACACGTCCAACTGCATCCACTACAGCTCTTTCCACCCTACAGAACATAAATTTGCGGCGTTTCGTTCTTTATTCCACAGGGCCTTCACCACCCCCATGTCGTACCAGGATTTCATTTCTGAAATTGGTACTATTATCCAGATCGCCTTTTCAAACGGTTTCCCCATCAAACCTGTTCATAATATTTTTAGGCGTACAAAAAATAATCTCACCAACCAAATCATCTTTCCGACTTTAAAACCACCCGAGGATCACTCCAAGAAATACTTTGCCATTCCCTTCACAGAGATCTCATCACAACAGTGTTCATTAGCATCTACAGAAGGGAACGAAAATAGCTTCTCTGCATCTCTGTCACCGCCTCGATCTAAAGAAGATTTAATTGACAAATTGAATACATATGAGAAGATGTATTTACATGAAAAAAAGATGGCTAGGTACTACAAAAACATTTGCAGAAATGCCAAGAGAAAACTCAGGAACATCGAGGAAAGgttGGGATCAACCGAATGCGAAGTGAAATGGACGATACCATCGAGCCACCACCCGGAAAAGGCGAAACCTAAAAGAATTCGTAAAAAGTGGAAGGAAGACGTTGAAGTGAGGACGTACACGTGCGAGATATGTTCGTTCACTGCGGAGTTAACGAGGACCGAACTGAACGCCCACTATAACACCCACGGGAAGGCGCTCGGGTTGAAGAAGTCCAGGAGGGGGCCCCCAAATCCCGACCGGATTTTCGACTGCGAAATCTGCTCGGCGAAATTCTCCTCCGAGGAAGACCTAGACGAGCACATACTAACTCACGACGACCAATACAAATGCGAAGTCTGCCAAATGGGTTTCAGGAAGATCATAGATTACACCATGCATATGCAGTCGCACCACGATGATAAATTGTACAAGTGCCCCCTTTGCGACTACAAAACGGCCAACGTCTATCACATTAAAATGCACGTGTTTTCGCACGGCTTCGTCAGGAGGTACGAGTGTCCCGTTGAGGGATGTAAGAAGGGCTTCATGTGGTCCACTCATTTTCAGGAGCATAAGAATTATCACTCGGGTGAAAAGCCTTTCGTTTGCGAAACGTGCGGAACTGCGTTTATGTACAGTCGCCAATTGTGTGTGCACAGGGGAGCGAAGCACAGCACCAAACCAATCACGTGCAAGATCTGCTCGGGAGTCTTCGTCGGCCTAAAAAACTTCCGCTCGCACTTATCACTACACAAGGAACCCGATTGGATTTGCGCAACCTGCGGGAAGACCTTCAAGAAGCGCGTTGGCTTGAAGGCTCACGAGTTAATGCACGCCGGGTATAAGCCGCATAAATGTAGGTACTGCGACAAAGTTTTCGGCAAGAGAAGCTACTTGATTCAGCACGAGCGCACACACACGGGTGATAAGCCGTATGATTGTGAGCACTGCGAGAAAAAGTTCACGCAGAGATCCAGTTTGGTCAGGCACGTGCGCGGACATACGGGCGAAAAACCTCACACCTGCCGCTTCTGCAACAACGCATATACTACAAAAACAACGCTCGCTTGCCACTTGAAAAATTGCAAAGGGCCTTCTGATTTACAAATGTTAGGATCAATCGAGTGCGAAGTGAAATGGACGATACCATCGAGCCACCACCCGGAAAAGGCGAAACCTAAAAGGATTCGTAAAAAGTGGAAGGAAGACGTCGAAGTGAGGACGTACACGTGCGAGATATGTTCGTTCACTGCGCAGTTAACGAAGACCGAGCTGAACGCTCACTACAACACCCACGGGAAGGCGCTCGGGTTGAAGAAGTACAGGAGGGGACCCCCGAACCCCGGGCGGGTTTTCGATTGCGAAATCTGCTTGGCGAAATTCTTCTCTGAGGAAGACCTAGACGGGCACATACTAGATCACAACGACCAATACAAATGCGAGGTCTGCAAGATGGGTTTCAAGAAGATCATAGACTACACCATGCACACGCAGTCGCACCACGATGATAAATTGTACAAGTGTCCCCTGTGCGACTACGAGACGGCTAACGCCTACCAAATTAAAACGCACGTGTTTTCGCACAACTTCATTAAGAAATACGAGTGCCCCGTCGAGGGGTGCAAGAAGGGCTTCATGATTTTCACGCATTTCGAGGAGCATAAGTATTaccacaccggcgagaaaccttTTGTCTGCGAGACCTGCGGGTTGGCGTTTATGTACAGTCGCTACCTTAGGTCGCACATGACGAGAAAGCACAGCATCGACGCCAGCAAGAAATTCAAATGTGATATTTGCTTAGAGGTCTACTCGAGCTATCAAAATTATCGCCGGCATTTACTCGAACATAAACAATCCGAGTGGGTTTGTGCGACCTGCGGCAAGACGTTCAGAAAACAAGCGGGCTTAAAGACCCACGAGCTGATGCACGCCGGGTCTAAGCCAAATAAATGTAGGTTTTGCGACAAGGCGTTCACCCGAAAGGGCTACTTGAATGAGCACGAGCGCGTACATACCGGTCACAGGCCGTATGACTGTGACTATTGTGGAAAGAAGTTCACGCAGAGGTCGAGTTTGGTGAGGCACATGCGTGgtcacaccggtgagaagccctACATCTGTCGCTTCTGTAACAACGGATATACCTCGAAAGCCACCCTCACTTGTCACTTAAGAAACTGCAAAGGCCCTTCTGAgGTACGATCGTTCAGGCTTGTACTGAATCCGGAATTTTCAATCGACGCCTGTGGTAAGCCCGCGGGCtccaaaaatattaacaatgcAAATTACTTATGGAGAGAAATAAGCAACGAGGAATATCAAGCTGGCGCGGAGGCGTTCCTGAAAGGCCCCAAGAAAAATCGTAAGAAATGGCCGAAAGACACCGAAGCGAGGATGTACACGTGCGAAATCTGTTTGATGACCGCGAAGCTGACCAGACCCGAACTGAACGCTCACTATGACACCCACGGGAGTTCGCTCGGCCTGAAGAAGTTCCGGAAACGCCCGCCGAAACCCGGCCAGTTGTTCGTCTGTGAAATCTGCTCCGAGAATTTCTCCTCGGAGGAAAACCTGGACGACCACATCGTAAGCCACGACGACCATTACATATGCGACGTTTGTGAAAAGGGTTTCAAGAAAATCATGGATTACACCATGCACGTGCAGTCCCACCGCGAAGATAAACTGTACAAGTGCCCCCTGTGCGACTACGACACCCCCAAGGCCTACCACATCAAATCACACTTGCTTTCGCACCAAGTCACCAAGAAATACGAGTGCCCCATCGAGGGGTGCAAGAAAGGCTTCACGCAGTTCAGCTATTTCCAGGAGCACAAGTATTaccacaccggcgagaagccctTCACCTGCGAAACCTGCGGCGCCGCTTTTATGTACAGCCGCTATTTGTCCTCGCACAAGATAAGAGTGCACAGCCCCGCCGTGCAAATCACGTGTGAGATTTGCTCGAAGATTTGCGTCGGCCGCAGAAATTTCCGCTCGCACTCCTTGCTGCATAAAGAGCCGGAGTGGGTTTGCGTGACTTGTGGGAAGGCCTTCAAGAAACGCGTGAGCTTGAAGACCCACGAGTCGACGCACGCTAAGGACAAGCCGTACAAGTGTAAGCACTGCGAGAAGGATTTCGCCAGAAGGGAGTACTTGATTGAGCACGAGCGCATACATACCGGTTATAGACCGTACGATTGTGAACTGTGCGGGAAAAAATTCTCGCAGAGGTCTAGCATGGTTAGGCACGTGCGCGGTCACACAGGCGATAAACCACACGTCTGTCGCTTCTGCAACAAAGGGTTTACCACGAAAACGACCCTCACTTCCCACTTAAAAACCTGCAAAGGACcataa
Protein Sequence: MNPTIPRLYGLPKSHKPDCPIRPVVSFTGSPASPISKFLVNTFKCHLNLQTKFSLTNSQHLIQKLQSVQLSKNSILVSFDVTNLFTSIPVTEAIGIVNNLLTSSDLSDSRSQFLQSLLRITLQQNFFIFNKKYYTQTDGLAMGCSLSPLLADLFMDKLENIFFSSNSSHKDHIQFYGRYVDDILIIYDGPLTAIHSLLSEFNALHHKIKFTLETEKNCSINFLDLTISKSNNSLHYKIYRKPTYTSNCIHYSSFHPTEHKFAAFRSLFHRAFTTPMSYQDFISEIGTIIQIAFSNGFPIKPVHNIFRRTKNNLTNQIIFPTLKPPEDHSKKYFAIPFTEISSQQCSLASTEGNENSFSASLSPPRSKEDLIDKLNTYEKMYLHEKKMARYYKNICRNAKRKLRNIEERLGSTECEVKWTIPSSHHPEKAKPKRIRKKWKEDVEVRTYTCEICSFTAELTRTELNAHYNTHGKALGLKKSRRGPPNPDRIFDCEICSAKFSSEEDLDEHILTHDDQYKCEVCQMGFRKIIDYTMHMQSHHDDKLYKCPLCDYKTANVYHIKMHVFSHGFVRRYECPVEGCKKGFMWSTHFQEHKNYHSGEKPFVCETCGTAFMYSRQLCVHRGAKHSTKPITCKICSGVFVGLKNFRSHLSLHKEPDWICATCGKTFKKRVGLKAHELMHAGYKPHKCRYCDKVFGKRSYLIQHERTHTGDKPYDCEHCEKKFTQRSSLVRHVRGHTGEKPHTCRFCNNAYTTKTTLACHLKNCKGPSDLQMLGSIECEVKWTIPSSHHPEKAKPKRIRKKWKEDVEVRTYTCEICSFTAQLTKTELNAHYNTHGKALGLKKYRRGPPNPGRVFDCEICLAKFFSEEDLDGHILDHNDQYKCEVCKMGFKKIIDYTMHTQSHHDDKLYKCPLCDYETANAYQIKTHVFSHNFIKKYECPVEGCKKGFMIFTHFEEHKYYHTGEKPFVCETCGLAFMYSRYLRSHMTRKHSIDASKKFKCDICLEVYSSYQNYRRHLLEHKQSEWVCATCGKTFRKQAGLKTHELMHAGSKPNKCRFCDKAFTRKGYLNEHERVHTGHRPYDCDYCGKKFTQRSSLVRHMRGHTGEKPYICRFCNNGYTSKATLTCHLRNCKGPSEVRSFRLVLNPEFSIDACGKPAGSKNINNANYLWREISNEEYQAGAEAFLKGPKKNRKKWPKDTEARMYTCEICLMTAKLTRPELNAHYDTHGSSLGLKKFRKRPPKPGQLFVCEICSENFSSEENLDDHIVSHDDHYICDVCEKGFKKIMDYTMHVQSHREDKLYKCPLCDYDTPKAYHIKSHLLSHQVTKKYECPIEGCKKGFTQFSYFQEHKYYHTGEKPFTCETCGAAFMYSRYLSSHKIRVHSPAVQITCEICSKICVGRRNFRSHSLLHKEPEWVCVTCGKAFKKRVSLKTHESTHAKDKPYKCKHCEKDFARREYLIEHERIHTGYRPYDCELCGKKFSQRSSMVRHVRGHTGDKPHVCRFCNKGFTTKTTLTSHLKTCKGP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -