Dpar001085.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus parallelipipedus
Gene Symbol
-
Assembly
GCA_958336345.1
Location
OY284475.1:8340249-8363595[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 39 4 3.7e+02 3.3 0.6 1 23 14 34 14 34 0.82
2 39 0.0013 0.12 14.3 1.8 1 23 40 62 40 62 0.98
3 39 0.0028 0.26 13.3 4.4 1 23 68 90 68 90 0.98
4 39 0.00056 0.052 15.4 4.1 1 23 96 118 96 118 0.98
5 39 0.00047 0.043 15.7 1.2 2 23 125 146 124 146 0.97
6 39 0.00086 0.08 14.9 1.2 1 23 152 174 152 174 0.98
7 39 0.00084 0.077 14.9 1.0 1 23 180 202 180 202 0.99
8 39 0.026 2.4 10.2 3.4 1 23 244 266 244 266 0.98
9 39 0.071 6.5 8.8 3.3 1 23 272 294 272 294 0.96
10 39 0.0065 0.59 12.1 2.3 1 23 300 322 300 322 0.97
11 39 0.0016 0.15 14.0 0.3 2 23 329 350 328 350 0.93
12 39 0.009 0.83 11.7 5.6 1 23 356 379 356 379 0.91
13 39 0.011 1 11.4 1.3 2 23 386 407 385 407 0.97
14 39 0.00034 0.031 16.1 0.7 1 23 413 435 413 435 0.99
15 39 0.73 67 5.6 4.5 3 23 492 512 490 512 0.96
16 39 0.003 0.28 13.2 2.1 1 23 518 540 518 540 0.97
17 39 0.24 22 7.1 7.5 1 23 546 568 546 568 0.98
18 39 0.00017 0.016 17.1 4.0 1 23 574 596 574 596 0.98
19 39 0.034 3.1 9.8 0.7 3 19 604 620 602 623 0.96
20 39 9.2 8.5e+02 2.2 0.2 10 23 624 637 621 637 0.87
21 39 0.00048 0.044 15.7 1.2 1 23 643 665 643 665 0.99
22 39 0.00041 0.038 15.9 1.8 1 23 671 693 671 693 0.99
23 39 0.004 0.36 12.8 4.9 1 23 778 800 778 800 0.98
24 39 8.5e-05 0.0079 18.0 1.1 1 23 806 828 806 828 0.99
25 39 0.00028 0.026 16.4 0.7 1 23 834 856 834 856 0.98
26 39 0.0072 0.67 12.0 1.1 1 23 862 884 862 884 0.98
27 39 0.037 3.4 9.7 5.9 1 23 890 912 890 912 0.98
28 39 0.00072 0.067 15.1 0.9 2 23 919 940 918 940 0.97
29 39 0.14 13 7.9 4.0 1 23 946 968 946 968 0.98
30 39 0.31 29 6.8 3.7 1 23 1030 1052 1030 1052 0.98
31 39 4.1e-05 0.0038 19.0 0.6 2 23 1059 1080 1058 1080 0.96
32 39 0.089 8.2 8.5 3.2 1 23 1086 1108 1086 1108 0.98
33 39 4.8e-05 0.0044 18.8 0.9 1 23 1114 1136 1114 1136 0.98
34 39 0.59 55 5.9 0.2 1 23 1142 1164 1142 1164 0.97
35 39 0.021 1.9 10.5 2.0 1 20 1170 1189 1170 1192 0.94
36 39 0.11 10 8.3 7.5 1 23 1198 1220 1198 1220 0.98
37 39 0.0015 0.14 14.1 1.2 1 23 1226 1248 1226 1248 0.99
38 39 0.00048 0.044 15.7 1.3 1 23 1254 1276 1254 1276 0.98
39 39 0.0011 0.1 14.5 2.5 2 23 1281 1302 1280 1302 0.97

Sequence Information

Coding Sequence
ATGAGACGACACGTTAAGACCCATTCCGACGAGAAACCTTTCGTCTGTGAGATCTGCAACTATAGATCCCGAATCCCattgaaacagcacatgttaaaacacacTGGCGAAAAGCAGTTCGTTTGCGATCGTTGCGGTTTCAGTTGCTTCACGATTGGAGCTTTGAATAACCACATGCGaaaacacaccggcgaaaaaCTGTTTAGTTGTGACCTGTGCACTAAAAAGTTTCAACAACTGGGACATATGAGAAGGCACAGgttaacgcacaccggcgagaagcggTTCACGTGTGAAGTTTGCGATTACAGATGTCAACGTTCAGAAGATCTGAAACGTCACATGTTCAAACATAAGGGTGAAAAGTCGATCAAATGCGccctttgcgattttaaatgcgcAAGACCTGACTACCTGAAAAATCACATGTTAACACATACCGGTGAAAAACCCTTCAAATGCCATCTTTGCAGTTACGAGTCCAGTCGGTCCGGAAATTTATGGGCACATGTTTTAAAGCATAGCGACGAGAGGCCATTTAAGTGCGGACGTTGTGAATATGTAAGCAAATCAGCAAGATATTTAAAACTGCACATGCGAGTGCATTCGGATGAGAAGCCGTTTAGATGTTCTGGAATTTCTAAACCTACGATTTCGGATATATGGAAACCTGAACGTGCTACTGCTCAGCCCGAATATAATGTACTGTTTTTTAATGGCATGAGGCAATTCATTTGCaaactttgcgattataaatgccaacGAATCGACAGCATAAAACGACACATCAAGACCCATTCCGACGAGAAACCTTTCGCCTGTGAGTTTTGCGATCACAAATGCAAATTCGCCGCAAATATGAAACAGCACATGgtaatacacaccggcgaaaagAAGTTCGTCTGCGACCGTTGCGGTTTCAAATGCCTCACGGCCGGAactttgaagcagcacatgcgAACGCACACCCACGAGAAACTCTTAAGTTGTAGCCTGTGCGCGAAGAGATTCAAGAACCCAAGAAATTTGAACGAGCACGAACTAGCCCACAccagcgagaagccgttcaagTGCAAATCTTGCGATTATAGATGTCGACGTTCGGATTATCTAAAACGTCACGTCGCGTTCAAACATGAGCGTGAGAAACCGATCAAATGtggcctttgcgattataaatgcgcaACGGTTGATAATATGAAACGGCACACGGcgacgcacaccggcgagaaacaaTTCAAATGCAACTTGTGCAGTTATAAGAGCAGTCAGGCcggcaatttaaaattacacgTGCGAGTGCATTCGGAGGAGAAACCGTTTAAGTGTGACCTTTGCGAATATGCGTCCAGatgGCCTGTGGTTCCAGACGAATGGACAACCGAACATGACCACAGTGGTTCTGACCTTGAATCTTCCAAGTATGTACCGGAATGTATACTGTTAAACACCGACGACGCGAAGCCGTTGTtctgcgatctttgcgattataaatgccagcTAATCAAACACTTGAGGCAGCACATGAAGATCCATTCCGACGAGAAGCCCTTCGCCTGTGCGACCTGCAATTATAGATGCCGATTCGCCGGAAGCTTGAGACAgcacatgttaacacacaccgacgagaagcacTTCGTTTGCGATCGTTGCGCTCACAAGTGCCGCACGCACGGAACCTTGAAGCGCCACATGGAGAAACACGTCAGCGAGAAACTGTTCAGTTGCGATCTGTGCCATAAAAGATTCAATCTATCTGGGAATTTGAGGCGGCACAAGTTAACACACACAGGCGGCAAGCCGTTCGGCTGCGAATTTTGCGACTTAAAGTTTCACCGTTTATCGGACCTGCGCCGCCACAGCTACGAATGCAATAAGCCTGCGAACTTGAGGTTGCACTTGCTGACGCACACCGACGAGAGACCGTTCAAGTGCGAACGCTGCGAATACGTAAGCAAGTCGGCCAGATATTTAAAGCTGCACATGCGAGTGCATTCGAATGAGAAGCCGTTCAAGTGTAACCTTTGCGAGTTCGCGTCTAAATTTCAGGGTAACTTACAGAAACACATGACGACGCACGAGAAACCGCCGCTCAAGTGTAACACTTGCGAGTATACGTCTTATTGTCATGCGGCTAGACGCCTCTCTACCTGCAACTCCGGATGCACTACTGCCCTACAAACGCTACGCCCTGCGGCGGCCCTTCTAGGGAGCTACCTGAGGTGCCTTGGAGATTATAAACCGACAATTCCGGACATAGGCATGTGTGATTCCGATCAGTGTATACCCAACCCCGAATATAGTAGACTGTTATCTAATGGCGTGAAACTATACGTTTGCAACcactgcgattataaatgccaacCGAAGAGCAACATGAAACGACACATCACGATCCATTCCAACGAGAGGCCTTTCACCTGTGAgatttgcaattataaattcCGAGTCGACGGATATCTGAAACAGCACATGTTgacgcacaccgacgagaagcatTTCGTTTGCGATCGTTGCGGTCACAAATTCCGCGCGGCCGCAGCTTTGAGGCAGCACATGCTGAAACACGTCGGCGAGAAACTGTTTAGTTGTGATCTGTGCGCTAAGAAGTTTCTAAACTCTGGAAACTTGAGCAGGCACAAGCtgacgcacaccggcgagaagcggTTCAAGTGTGAATTTTGCGATTACAGATGTCAGCGCTTGGAATACCTGAAAAGTCACATGTTCAAGCATAAGGGTGAAAAACCGATCAAGTGCGCcgtttgcgattttaaatgcgcAAAACCCGCCTACCTGAGAAGGCACATGTTAACGCATACCGGCGAGAAACGCTTCAAGTGCCACCTTTGCAGTTACGACTGTAACCGGTCCGAAGGTTTAGGGCAACATCTTTTAAAGCATTCCGATGAGAGGCCGTTTAAGTGCGAGCGTTGTGAATTTGCGAGCAAAACGGCAAGATGCTCTGGGATTTCCAAATCTACACTTTTGGAGTTGTTGCAACAAGAACCTCGCACAAGTGGTTCCGATTTGAAATCTCTCGAATACGTACCCAAATACTTACTGTCACCTAACGGTGTGAAGCAATTCgtttgcgatctttgcgattataaatgccaacAAAGCCGACGCATGAAGGAGCACAGGAGGATCCATTCTTGTGAGAAGCCCCTCGTTTGTCAGACTTGCAATCGTAAGTTCCGTTTCGCCGGAAACTTGACGCAGCACATGTTGGTACACTCCGACAAAAAGCAGTTCGTTTGCGATCGTTGCGGTTACAAATGCCACTTGGTTGGATCTCTAATGCGGCACATGCTAAGACATACCGGTGAGAAACCGTACAGTTGTGATCTATGCCCTCGAAAATTTCAGCAGCCTGGTAGTTTGAAAAGGCACAAGTTAACTCACAACGGCGAGAAGACGTTCAGTTGTGAATTGTGCGATTACAAAGGTCGAAGTTTAGAAGATGTGAAAGGCCACGCGAAAAGACATAACAGCGAAAAACCGTTCAAATGTGCCCTTTGTGATTTTAAGTGCGCGCGGCCAGCATATTTGAAACGACACCTGTGgaggcacaccggcgagaaaagCCACAAATGTCACATTTGCAGTCACGAATGCAATCTGGCGTCTAATTTGAGGTTACACTTATTAACGCACACCGACGAGAGGCCGTTTAAGTGCGAACGCTGTGAATTTGCGAGCAAAACGGCAAGATATTTAAAGTTGCACATGCGAGTGCATTCGGATGAAAAGCCGTATAAGTGCGACCTTTGCAAATACGCGACTAAGTTTCAAGGTAATCTACAGAAACATCTGACGATTCACGAGAATCTGCTCAAGTGTAATATTTGTGAGTACACGTGTAAATTAGCGAGGGACTTAAAAAAGCACATGTTATCACATGCAGTAAAAGAGGCAATTTATAGTTACTTTGGCGATAAAAGAGATTTCGCTCAGTTAGCGCAAGAATTTGGCAATACCAAAATGTTACAAAGAGAGGACCCATTGTCATTTGGCAACAGATTACAAGATTTATTATCACAATTAATGACAAAACTTTCACAGTCCGACTTAGATCACAAAATTCAACGAGCAAAAATTTATTCACAGACAGCATTAGAAGTTTATTTATTGAATCTTCCCGAAGATATTCAAGTTCATGTCAAACCTTTACAACCAGAAACCTTAGAAGAAGCTATGGGTTATGTCCAAGATGCGAGAACAGCACATCCGAATGTGATCGTGGAAGAACTACATAACAATGAAATTCAGGAAAATCTACAACCAATTTATAACGAAGAAAATGGTTTGTGGTACGCTCCGATGCATGTGCCAAATATGCCGGAACAAATGTATGAAAACGAGAAGAATGTCGAGGAGTTTCAAATCGACGAGGAGGAAGAAAATTTTACTATACCTGCCTCACCGGAGAACTCAATCGATTAG
Protein Sequence
MRRHVKTHSDEKPFVCEICNYRSRIPLKQHMLKHTGEKQFVCDRCGFSCFTIGALNNHMRKHTGEKLFSCDLCTKKFQQLGHMRRHRLTHTGEKRFTCEVCDYRCQRSEDLKRHMFKHKGEKSIKCALCDFKCARPDYLKNHMLTHTGEKPFKCHLCSYESSRSGNLWAHVLKHSDERPFKCGRCEYVSKSARYLKLHMRVHSDEKPFRCSGISKPTISDIWKPERATAQPEYNVLFFNGMRQFICKLCDYKCQRIDSIKRHIKTHSDEKPFACEFCDHKCKFAANMKQHMVIHTGEKKFVCDRCGFKCLTAGTLKQHMRTHTHEKLLSCSLCAKRFKNPRNLNEHELAHTSEKPFKCKSCDYRCRRSDYLKRHVAFKHEREKPIKCGLCDYKCATVDNMKRHTATHTGEKQFKCNLCSYKSSQAGNLKLHVRVHSEEKPFKCDLCEYASRWPVVPDEWTTEHDHSGSDLESSKYVPECILLNTDDAKPLFCDLCDYKCQLIKHLRQHMKIHSDEKPFACATCNYRCRFAGSLRQHMLTHTDEKHFVCDRCAHKCRTHGTLKRHMEKHVSEKLFSCDLCHKRFNLSGNLRRHKLTHTGGKPFGCEFCDLKFHRLSDLRRHSYECNKPANLRLHLLTHTDERPFKCERCEYVSKSARYLKLHMRVHSNEKPFKCNLCEFASKFQGNLQKHMTTHEKPPLKCNTCEYTSYCHAARRLSTCNSGCTTALQTLRPAAALLGSYLRCLGDYKPTIPDIGMCDSDQCIPNPEYSRLLSNGVKLYVCNHCDYKCQPKSNMKRHITIHSNERPFTCEICNYKFRVDGYLKQHMLTHTDEKHFVCDRCGHKFRAAAALRQHMLKHVGEKLFSCDLCAKKFLNSGNLSRHKLTHTGEKRFKCEFCDYRCQRLEYLKSHMFKHKGEKPIKCAVCDFKCAKPAYLRRHMLTHTGEKRFKCHLCSYDCNRSEGLGQHLLKHSDERPFKCERCEFASKTARCSGISKSTLLELLQQEPRTSGSDLKSLEYVPKYLLSPNGVKQFVCDLCDYKCQQSRRMKEHRRIHSCEKPLVCQTCNRKFRFAGNLTQHMLVHSDKKQFVCDRCGYKCHLVGSLMRHMLRHTGEKPYSCDLCPRKFQQPGSLKRHKLTHNGEKTFSCELCDYKGRSLEDVKGHAKRHNSEKPFKCALCDFKCARPAYLKRHLWRHTGEKSHKCHICSHECNLASNLRLHLLTHTDERPFKCERCEFASKTARYLKLHMRVHSDEKPYKCDLCKYATKFQGNLQKHLTIHENLLKCNICEYTCKLARDLKKHMLSHAVKEAIYSYFGDKRDFAQLAQEFGNTKMLQREDPLSFGNRLQDLLSQLMTKLSQSDLDHKIQRAKIYSQTALEVYLLNLPEDIQVHVKPLQPETLEEAMGYVQDARTAHPNVIVEELHNNEIQENLQPIYNEENGLWYAPMHVPNMPEQMYENEKNVEEFQIDEEEENFTIPASPENSID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-