Basic Information

Gene Symbol
ncor1
Assembly
GCA_958336345.1
Location
OY284480.1:36248493-36261442[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.7e-08 0.00012 23.6 0.1 4 43 411 450 409 452 0.98

Sequence Information

Coding Sequence
ATGTTTGAATTGTACACGAAGCAAGAGCGTACgcAAAACCATGCTCAACAGGAACTGTACAAGCCCGCCAGGTCACCCTTACCGCCGAGTCAGTCCCGTTATCCTTTCCCAGGATCGCCCCAGCTGCAGCCACAGGTTAACCAACTGTCGAGCCAACGTTACAACCTGTCGGCGGCAGCGCAACAGACGGGCTACAGGGATTACAGACAACATAGGATATCACTGTTGCACCCTGAGTATGGCTCTCGTCCGAGGGAAGTGCTGCAAGGTGGCGCGTCCATACACCACCTGGAGCCGATACCCGGGTTGGGCCAACAACCCTTTAAGAAAATTAGGCTGCAGGACCACAAGGACGTCCAACCTTTGCGGATCGATACAAGGGAACAACCTGGCGTTTATAATCCACAAGTAGAAGCGATTTCCCCGACCCTGCCCGATCACATTCAACAGGAAGATCAAGCATTCCGTACGACGAAAGACGAGCTTCTTCAGCAGATCGGCAAGGTCGACCGGGAGATAGCGAAAACAGAATCGCAGATTAGCATCCTGCGCAAGAAACAGCAGGAACTTGAGGAGTCCGCCCTCAAGCCGAACCAAAAATCCGAGGTGGAAGAAGACAATCAACCGAAGCACCAGAGCCTGGCGCAGAAGAGTTACGCCGAGAACCGCAAGAAGGCGCAAAGCTCGCACGCCAAATTGGACAACCTCGGGCCGAAAGTCGACTGGCCCATCTACAACCAACCCCTGGACACCCCTGTGTACCACGAAAATAAACGAAAGCACGTCGCGTTTAAGCGGCGGTTGCTCGATTATTTTAAGAAGAGGCAAGCGGATAAGGAGACGAGGAACTCTTACTTAACCGAGACCTATAGCAAAATGATGCAGGAGTGGCTGAGGAAAGTCGACAAGATCGAGTCCAGCACGAAGAGGAAAGCCAAGGAGGCGAAGAACCGTGAGTTCTTTGAGAAGGTTTTCCCCGAAATACGTAAACAAAGGGAAGACAAAGAAAGGTTCATTCGAGTAGGGGCGAGGATCAAATCCGAGGCGGACATGGACGACTTCATCGACAACCTCCAGGAGCAGGAAGTCGAGGATAAAAAGATGAGAAGCTATGCGGTGATTCCCCCTCTGATGTTGGACGCGAAGGAACGCAAGTTGGTTTACCAGAATAACAACGGGCACATCGCCGACATGGGGGCCGTGCATAAAAGCAGGCAGTTTCTTAACATATGGACGCGAACGGAGAAGGAGATATTCAAGGAGAAGTACTTGCAGCACCCTAAGAACTTCCATGTTATTTCGTCGTACCTCGAGAAGAAATCAGTATCGGACTGTGTGGAATATTATTATCTGAGTAAGAAAACGGAGAATTACAAGCAGTTGTTGAGGAAGTCGAAGATGAGGCCGAGGACGAGGAATAACCCCCAGAAGGCTAACGCCCCTGCCGTAGATATTTTAACCCCCGGAGTGACGACCAGGCTTCAGAGAGAGCAGCAACAAAAGACCGGTGTACAACCGACTCGAGATAACACTAGTGATATAAGCACGAGCGTAGCGAACACATCGACGACGCCTCCTAACAGTAGCACCCCTACGCTTACGACGTCGACGTCCACCGTGAGTACTACTAGTGTTACGTCCAGTGCGGTTAGTAGTGTTACTGCGTGCGAGGCAACACCGACGCCAACCTCGACGCCTTGCTCTGTCATTTCAAGCACGAGCGTCGCAAGCACCATCACGTCGGTCATGGTGACGTCCGTGGCTGTGCCGAGTGTCATCAAGAACGAACCAACTACAGACGGTGGTAACGCGACAGGCACTGGTGAAGACTCAAAAAATTCCAGCGACCTAAACAGTGCAGACGGTGGTAAAAAGTTTCTCAACGACGTCGTCGTCAAGGTGGAGAACAACTCGAGTAGTAACGACGGAAGCAACAATGAAACCACCCCCCTGACACCGATGATAACGACGGTCAAAAAAGAAGAGGGTTCAACTGAGAACAGTGGAAGTGACCAGAATTTGTCGTCCAGTGCTGTagtagaaaacaaaaagaagaaggaaCGAAGAAAAGACAAGGAGAATTCGCAACTGGAGACCAGCGAGGACGAGTCCCCGGATCTTCACGGGCTGTGGTGTCGGTACATAAAACCTTCGACTCCAACTCTGACTCCGATTCCGATTCCAACCCTGCCTCCGACTACGAGTCTTTTATAA
Protein Sequence
MFELYTKQERTQNHAQQELYKPARSPLPPSQSRYPFPGSPQLQPQVNQLSSQRYNLSAAAQQTGYRDYRQHRISLLHPEYGSRPREVLQGGASIHHLEPIPGLGQQPFKKIRLQDHKDVQPLRIDTREQPGVYNPQVEAISPTLPDHIQQEDQAFRTTKDELLQQIGKVDREIAKTESQISILRKKQQELEESALKPNQKSEVEEDNQPKHQSLAQKSYAENRKKAQSSHAKLDNLGPKVDWPIYNQPLDTPVYHENKRKHVAFKRRLLDYFKKRQADKETRNSYLTETYSKMMQEWLRKVDKIESSTKRKAKEAKNREFFEKVFPEIRKQREDKERFIRVGARIKSEADMDDFIDNLQEQEVEDKKMRSYAVIPPLMLDAKERKLVYQNNNGHIADMGAVHKSRQFLNIWTRTEKEIFKEKYLQHPKNFHVISSYLEKKSVSDCVEYYYLSKKTENYKQLLRKSKMRPRTRNNPQKANAPAVDILTPGVTTRLQREQQQKTGVQPTRDNTSDISTSVANTSTTPPNSSTPTLTTSTSTVSTTSVTSSAVSSVTACEATPTPTSTPCSVISSTSVASTITSVMVTSVAVPSVIKNEPTTDGGNATGTGEDSKNSSDLNSADGGKKFLNDVVVKVENNSSSNDGSNNETTPLTPMITTVKKEEGSTENSGSDQNLSSSAVVENKKKKERRKDKENSQLETSEDESPDLHGLWCRYIKPSTPTLTPIPIPTLPPTTSLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00464773;
90% Identity
iTF_00464773;
80% Identity
-