Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: SMARCC2
Assembly: GCA_958336345.1
Location: OY284479.1:3596421-3599837[-]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.8 1.6e+04 -2.5 0.0 32 43 199 210 197 212 0.85

2 3 1.3e-14 2.6e-11 44.9 0.1 3 44 592 633 590 635 0.95

3 3 7.7 1.6e+04 -2.5 0.7 6 16 740 750 739 751 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.8	1.6e+04	-2.5	0.0	32	43	199	210	197	212	0.85
2	3	1.3e-14	2.6e-11	44.9	0.1	3	44	592	633	590	635	0.95
3	3	7.7	1.6e+04	-2.5	0.7	6	16	740	750	739	751	0.85

Sequence Information

Coding Sequence: ATGATCGCTTTTGGGCCTAAAAAGGATGGAAGTCCTAATGTGAAATACTTCGAATCTCCAGAAACGCTATGTGCGCTAGAAATAGTAAAACAATGGTTGCAGAAGACTGCAAGAAAGTACATACAATCAGATCCCCCCACAAACAAGAGTTTGTCGTCTCTAATTATTCAATTACTTCAATTTCAAGAAGACAACTTGGGAAAAAATGTTCAGAAACCTCCGATGACCAGAATACCCGTGAAGTATTTCATGGATTTCAAGTCGGGTGGTGCAGTCTGTCAAATGATGGCAGTTGCCTACCGGTACAAAAGTGAACAAGGATGGAGGAAATTTGATTTGCAACCGGGAAAAAATCCCGCACGACTAGACAGATTAATAGAAATGTTTCAATCAATGGAGAAATGCTTGGTCCAAAGCAAACTGTATACATTGCCAATAATTTATGTAAAGCCGGAAGTAGATAAGAGTCTTGCGGTGAAGTTAAAAGAAATCATTCGCAAAAGAAACGGACAAGTTGTGGATGCAGAAGAAGCCGCCACGCATATTTTGTATCCACACTGTGATCCTTTAGAAGAAGAATATGCAAGACCGGGCCTCCGAAGGGATAAAATGATCATGATGCATTGGTATTATTTTCCAGATTCTTATGATACATATGTTAACGTTGAAGGTGCTCTTGAAGGACTTCCTGTAGATATGACTCCTCCACATACTGGACCTTGGAGAGTATCTTCAACGTGGCTTTTGGATTCAGATCAGTACAACGAGTGGATGACTGAAGAAGATTATGAAGTTGATGAAATTGGAAGAAAGAAGGTGCACAGAATGAGAATGTCTGTGGAAGATTTAATGAATCCTTCGGGAGACTTGGACAGAAATAAGAAAAAGCAAAAAAGGAAGCGATCACCCTCACCTCCTCTTAAGGCAGGAAAACGGAAAAGTGGAAGAAGCCCGGCAATTGGGAAGAAAACAAGACCGGAAGACGCCGAATCTGAAGACCTTACGAAGGATATGGAAGAGCCAGTTGCAGAGCCTAACATCACAGAAATTAATCCTACACTACCGGGGCAACCTGGTAAGAAAGACCATGAATTACAACCGTTAAAAGGCGGTTCACTGACGGACTTGGATGATGTAGAAGAGCGTGGTGAAGATTCTCAAACTGGCAAGAATAGTGATAGTAACACGCAAGATGATGGTCAAGAAGATAATGTAACAGAACAAACGCATCATATAATTGTGCCATCGTATTCTTCTTGGTTTGATTATAATTCAATACATGAAATAGAAAAACGGGCCTTGCCTGAATTTTTTAACGGCCGTAACAAATCTAAGACGCCTGAAATTTATTTGGCTTATAGAAACTTCATGGTTGATACGTACAGGTTAAACCCAACCGAATACATAACGAGCACCGCATGTCGTCGGAATTTAGCAGGGGATGTTTGTGCTATCATGCGAGTCCACGCATTTTTAGAGCAGTGGGGTCTTATTAATTATCAAGTCGATACAGACTCCCGCCCCACACCTATAGGGCCACCTCCTACATCTCATTTCCATATTTTATGTGATACACCATCAGGTTTGCAACCCGTTAATCCACCTAAAACTTCTCAACCGAGTGCTGCTAAGACCTTGCTGGATTTAGACCGAGCGCAGGAAGCTAAGAAATCTGATTTAACCGACCAAATATCAGGATTCGGCTTAAAATTGGATCAATACTCGAAGAAACCAGCTgcattaagaaataaaagtgcAGCATCTTTGGCAAGAGATTGGACAGAGCAGGAAACACTTCTTTTATTGGAAGGCTTAGAAATGTACAAGGATGATTGGAATAAAGTGTGTGAGCATGTGGGTTCGCGCACACAAGACGAATGTATTTTACATTTCTTACGTTTGCCTATAGAAGATCCGTACCTTGAAGACCCTGAAGCCGGTGGTGCACTGGGGCCTTTAGCTTATCAGCCGATACCTTTCAGCAAAGCAGGAAATCCCATCATGTCGACTGTTGCATTTTTGGCATCTATAGTTGACCCGAGAGTAGCTGCAGCCGCAGCAAAATCAGCCATGAACGAATTTGCTAGTATAAAAGACGAAGTCCCAGCTGCTATAATGGATGCACATTTAAAGAACGTAGAGGCATCATCAACGGATGGCAAATTCGACCCGGCTGCCGGTTTAGCACTCAGCGGCATCGCAGGCACTGTACCAGAGAAAGAAGAAgacgataaaataaaaaaggaagtCGATGTAAAAGAAGAAGATTCTGGAGACTCGAAGAAAAACGGGTTGGAATCGAACGAAGACAAACTTGCTGATAAATCCGTGATGAAAACCGAACCTGTAGAATCTGACAAGGATGAGAAAATGGATACATCTGATATTAAAGCCGAGAAAGTAATACGCGACAGTGAAATGCAAAGTGCAGCAGCGGCAGCCTTGGCGGCTGCTGCTGTAAAAGCGAAACATTTGGCAGCCGTTGAAGAACGTAAGATAAAATCACTCGTTGCTTTATTAGTGGAAACCCAAATGAAGAAGCTCGAGATTAAATTGAGGCACTTTGAGGAGCTTGAAACTACGATGGAAAGAGAAAGGGAAGGTTTAGAATATCAAAGACAGCAGTTGATTACGGAGAGGCAACAGTTTCATTTAGAGCAGTTAAAGGCTGCGGAATTTAGAGCAAGACAGCAAGCACATCAACGGTTGCAAGCTGAACAAGGTCAGTGGGCGCAGCAGCAAACGGTAATACCTCACACTGTACCATCGTCTGACACAGGTCCTAGTACTACACCAACTCCACCTTCACCACAAGCTGCTGCGGTTGCATCACCTGCACCTCCTCACCATCAtatataa
Protein Sequence: MIAFGPKKDGSPNVKYFESPETLCALEIVKQWLQKTARKYIQSDPPTNKSLSSLIIQLLQFQEDNLGKNVQKPPMTRIPVKYFMDFKSGGAVCQMMAVAYRYKSEQGWRKFDLQPGKNPARLDRLIEMFQSMEKCLVQSKLYTLPIIYVKPEVDKSLAVKLKEIIRKRNGQVVDAEEAATHILYPHCDPLEEEYARPGLRRDKMIMMHWYYFPDSYDTYVNVEGALEGLPVDMTPPHTGPWRVSSTWLLDSDQYNEWMTEEDYEVDEIGRKKVHRMRMSVEDLMNPSGDLDRNKKKQKRKRSPSPPLKAGKRKSGRSPAIGKKTRPEDAESEDLTKDMEEPVAEPNITEINPTLPGQPGKKDHELQPLKGGSLTDLDDVEERGEDSQTGKNSDSNTQDDGQEDNVTEQTHHIIVPSYSSWFDYNSIHEIEKRALPEFFNGRNKSKTPEIYLAYRNFMVDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDTDSRPTPIGPPPTSHFHILCDTPSGLQPVNPPKTSQPSAAKTLLDLDRAQEAKKSDLTDQISGFGLKLDQYSKKPAALRNKSAASLARDWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDPEAGGALGPLAYQPIPFSKAGNPIMSTVAFLASIVDPRVAAAAAKSAMNEFASIKDEVPAAIMDAHLKNVEASSTDGKFDPAAGLALSGIAGTVPEKEEDDKIKKEVDVKEEDSGDSKKNGLESNEDKLADKSVMKTEPVESDKDEKMDTSDIKAEKVIRDSEMQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLQAEQGQWAQQQTVIPHTVPSSDTGPSTTPTPPSPQAAAVASPAPPHHHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00902171;
90% Identity: iTF_01257957;
80% Identity: -