Basic Information

Insect: Dorcus parallelipipedus
Gene Symbol: -
Assembly: GCA_958336345.1
Location: OY284483.1:9495858-9499155[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.7e-11 2e-08 35.2 0.1 1 40 3 43 3 47 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.7e-11	2e-08	35.2	0.1	1	40	3	43	3	47	0.87

Sequence Information

Coding Sequence: ATGTGGTCTGAAGAGGATATGAAAAGTGCTGTAACCGCAGTGAAATCTGGAATCCTCAGTCAAAATAAAGCTGCTCGACAATTTGGAATTCCAGTAGCTTCATTGAACAGACGCATTAAAAGTGGTAAAACTGCAGAAGAGGCCTCAATAAAAAAGCTGGGGGTTGCGCTTCGAAAATCTAGAAGGGAGATTTTTCAAATATGGCTTGAGAAGAAAGGTCAGAGCAGCAGCGTTAAACGCAATCATGTAGTAGATACTATGACTAGTACGTTTGACGATGACCAAGTtatagaacaaataaaaaaagatattggTCGATTCTGCAGCGAAGTTGAAAAACGGTGGCAAAAGTGCAATAGAACGGAAAACTTATTTCTAATTAAGAATTCCGATTGGTTGGACGACGCTCTATTGGAATGGCCATCTGAGGCCATAGCTGAAGAAGTGGATGAAAACGTACCATCAACAAGTAGTGGCCGACCTGCTACGTCATTTCGTGAATGCGGAGAACGCTCCAAAAGGCGAAAAACGAAAGAGCTTCGCGAGCAATACAGCGCTGAGGAACTAGCATATGCAGCTCAAATGAGTCTGCGAAGTGCTGGCCAAAAGGACGCTACTACATTACTTTTTGAATCAGTTGAGACCACACCAACTAGACCTTCCCGAATAAGAGAGGCGTGGACAAAAAGCAAAGAGACGGAAATAAAGCCGTATTCATCCGACGAAGCACTGGCCTTGTTCATTGACACACGATTGACAAAGAGTCAATATATGAAAATAAGAATACAAGCCAAAACGAGGAAGGCGGATATCTATCCAAGTTACCACAAAGTGCAAGTTGCGAAAAACTCATGCTATCCTCCAGACGAAGCTATTACAATCACTGAAGCTCTAATGGAAGTACAATTACAAGCTCTTTTAGATCTAACAATCAGAAGGATCATATTGTTGCAAGAGGATGTATTTGCAGCCATGTCTGGTGAGATCACACGAGAAGTTGTACTTATTTCAAAATGGGGTTGTGATGGAAGTACTGGACACAgtgaatacaaacaaaaatctaGCGATAATTTGCGTGATAGTGATATGTTCATAAGTTCTTTTGTCCCAATTCAATTGTATTCTACGTCGAcatcaaaaaagaaagttattttgtgGCAAAATCCAAGACCATCTTCAGTCAGGTATTGTAGACCAATTCGCTTGCAGTTCAAGAAAGAAACAACAGAACTATCAAAACATGAGATCGAATACATTGAAGAGCAAATTGATAATTTACACAAAACTGAAGTTGCTGTTGCAGGGAAAACGTTTTTTGTAACACATCAACTGGCACTTACAATGTTAGATGGTAAAATTTGTAATGCCATTACTTCAACAACATCAGCCCAGAAATGCTATATTTGTAACGCAACGCCTACAAAAATGAACGACCTGGAAGCAGTACGTGCAAGAGACGTCGATGAAACTACCTACCGTTTTGGTTTGTCACCATTGCACGCCTGGATAAggttttttgaatgttttattcatatttcCTATCGCATGGATTTTAAAAAGTGGCAAGTTAGACAACCCGAGGAGAAAAACttgtttgaaaataagaaaaagattatacaacaagatttaaaaaatcaattggGGCTATTAGTTGATCATGTAAAACCTGGAGGTAGTGGTACCTCAAACAATGGCAACACGGCTCGGCGGTTCTTTAAGAACTTTCAAATCTCTGCAAAAATTACGGGGATTCACGAAGGGCTGCTTAAAAGATGTGCAGTGATATTGGAAGCCATCTCTTCCGGTTTCATTTTGGACCGAGAAGCATTCAGAAATTATGCATTTGAAACAGCCAAATTATATGTACAATTATATCCGTGGTATTACATGCCTGCTTCAATGCATAAGATTTTAATTCATGGCTCGGATATAGTTGCTCATGCCTTACTTCCAATGGGACAGCTTTCTGAAGAAGCGCAAGAATGCCGGAATAAAGACTTAAAGCTTTATAGAAGGAGTCACACTAGGAAAACTTCTAGGGAAACGACAAATCAAGACTTACTAAATTTACTGTTCGTTTCATCGGATCCTTATATAACATCTTTAAGAAAGTTGCCTCAGAAATTTAGAAAGAATCTTTCTCATGAAGTGCTGCAGCTTTTAGCTCCTCCCAGCGAAGAAGAGGACGTTTTAGTAAACGTCATGTCAGAAGATATATCGGAAGAATCCAGCGAAACTTTATCAGATAGTGATAGTGACTGA
Protein Sequence: MWSEEDMKSAVTAVKSGILSQNKAARQFGIPVASLNRRIKSGKTAEEASIKKLGVALRKSRREIFQIWLEKKGQSSSVKRNHVVDTMTSTFDDDQVIEQIKKDIGRFCSEVEKRWQKCNRTENLFLIKNSDWLDDALLEWPSEAIAEEVDENVPSTSSGRPATSFRECGERSKRRKTKELREQYSAEELAYAAQMSLRSAGQKDATTLLFESVETTPTRPSRIREAWTKSKETEIKPYSSDEALALFIDTRLTKSQYMKIRIQAKTRKADIYPSYHKVQVAKNSCYPPDEAITITEALMEVQLQALLDLTIRRIILLQEDVFAAMSGEITREVVLISKWGCDGSTGHSEYKQKSSDNLRDSDMFISSFVPIQLYSTSTSKKKVILWQNPRPSSVRYCRPIRLQFKKETTELSKHEIEYIEEQIDNLHKTEVAVAGKTFFVTHQLALTMLDGKICNAITSTTSAQKCYICNATPTKMNDLEAVRARDVDETTYRFGLSPLHAWIRFFECFIHISYRMDFKKWQVRQPEEKNLFENKKKIIQQDLKNQLGLLVDHVKPGGSGTSNNGNTARRFFKNFQISAKITGIHEGLLKRCAVILEAISSGFILDREAFRNYAFETAKLYVQLYPWYYMPASMHKILIHGSDIVAHALLPMGQLSEEAQECRNKDLKLYRRSHTRKTSRETTNQDLLNLLFVSSDPYITSLRKLPQKFRKNLSHEVLQLLAPPSEEEDVLVNVMSEDISEESSETLSDSDSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -