Dpar011892.1
Basic Information
- Insect
- Dorcus parallelipipedus
- Gene Symbol
- -
- Assembly
- GCA_958336345.1
- Location
- OY284476.1:52784728-52785120[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.4e-12 1.3e-09 39.0 0.1 1 43 17 59 17 60 0.94
Sequence Information
- Coding Sequence
- ATGCCTAATAAATACAAGAGAAAGGCAGTAGCTCTGAGAGGAAATTGGTCTGAAGAAGCACTAAAAGCAGCCATTAGTGCTGTGAAAAATGACGGATTATCCGTGCGTGCGGCAGCTATTCAGTATAAAATACCGAGAAAAACATTAGAAAGAAGATTAAAGAAGAATAATGACAAGAAAGGGCCTATGAGACCATCTTCTTTAtttggagaagaaaatgagaagATTTTGGTTGCCCATATCAAATCGATGCAAGCCAATGGTTTTCCATTGACGATAGATGATGTCAGAAGGATAGCTTACAGTTTTGCAGagcagttaaaattaaaacatagaTTTAACAAAGAAACTCAGAAAGCAGGATATGACTGGTTGCAAATGATATTACACTAA
- Protein Sequence
- MPNKYKRKAVALRGNWSEEALKAAISAVKNDGLSVRAAAIQYKIPRKTLERRLKKNNDKKGPMRPSSLFGEENEKILVAHIKSMQANGFPLTIDDVRRIAYSFAEQLKLKHRFNKETQKAGYDWLQMILH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01091685;
- 90% Identity
- iTF_00465934; iTF_00465936;
- 80% Identity
- -