Dhop009162.1
Basic Information
- Insect
- Dorcus hopei
- Gene Symbol
- nfxl1
- Assembly
- GCA_033060865.1
- Location
- CM065420.1:16492081-16540232[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.26 6.8e+03 -1.3 0.8 4 10 360 366 359 366 0.94 2 15 3.1e-07 0.0081 17.7 17.2 1 19 374 391 374 391 0.99 3 15 1.9e-06 0.049 15.2 14.8 3 19 429 445 427 445 0.92 4 15 2.5e-07 0.0067 17.9 11.9 1 18 480 497 480 498 0.96 5 15 2.4e-05 0.65 11.6 11.3 1 18 533 550 533 551 0.98 6 15 0.43 1.1e+04 -2.0 0.6 1 5 560 564 560 569 0.89 7 15 6.7e-05 1.8 10.2 17.1 1 18 585 602 585 603 0.94 8 15 6.4e-10 1.7e-05 26.2 13.4 1 18 612 629 612 630 0.97 9 15 0.071 1.9e+03 0.5 5.6 10 19 679 688 677 688 0.91 10 15 0.033 8.8e+02 1.6 4.7 2 11 699 707 698 708 0.85 11 15 0.64 1.7e+04 -2.5 4.4 14 18 736 740 736 741 0.95 12 15 0.24 6.4e+03 -1.2 0.6 6 10 767 771 766 773 0.86 13 15 0.001 27 6.4 8.2 1 11 777 787 771 788 0.80 14 15 0.0013 35 6.1 17.5 3 19 818 834 817 834 0.92 15 15 2.4e-06 0.063 14.8 13.9 1 18 877 896 877 897 0.89
Sequence Information
- Coding Sequence
- ATGAAGTGGCTGGTGCTGTTCGTTTTGGCCGTCATTCTCGTGAGCCTGGCGGTGGCCGAAGGTGAAATTTGGGAGGAAGATGATCACGAGGTCCTCATCCGAAACGAGAGGGGTGCCAAGAACACTGGTAAGAAACAATGCAGATATGCGAAGGGAGAGTGGTCAGAATGCGATTCGAAGACCAACATGCGCTCCAGAACATTGACTTTGAAGAAGGGTGACCAGAAGACTTGCGAGGCCACTAAAACGATGCAGAAGAAGTGCAGAAAAGCTTTGCACATAACGTCTTTGGTAACTAGATCCTTGCTTTTCCTAGCATGTCGATACGAGAGAGGAGCTTGGGGCGAATGCAATCAAAATCAGATGACGCGGAAGGACAAGCTTAAGCCAAACAGCGACCCATCCTGCGAGCAGAACAGACAGAtcacgaaaaaatgcaacggaTCCAAGCCCACGAAAGGTAAAGAAGCAAAAATGAGTGAGTACTTTAAGCCACCTAAACAAAAAAACCCATGGGCTAAAGGCAAGCAACAACAACAGCAAAATAGATCTACGAAGGTAACCTCAAATAACCTCAAAAACtctgaaaataaattcaaagaGGCAACTAGCAAGCATCAAGCAGCTGCCCAAAAGTATGCCAAAGATTATGAATCTTCATCCGAGGAAGAAGAACTTGAGTCGCAACATATAATAGATAAGATATTAGAGGGTTATGCACTCGGTGAGGCAGACAAGGAAAATTTAAGCCGCACTAAGAATTACTTAGAAGACGCTTTTGTATCAGGTGCTGCCACCTGTCTCATTTGCATATCAAGCATCAAGAGGAACGATTCTATATGGAGTTGTTCCGAGTGTTACTGCTTTTTTCACTTAATGTGCATTCAACGATGGTCGAAGGATACGATCACTCAAAAGAAACTGGCTTTGGAGGGGCAGGTGCAAGTAAAGAAGATAAAAGTCGCCTGGGGTTGCCCTAAATGTAGACACGACTATGAACCTGCTGATATTCCAACTCAGTATTTGTGCTTCTGTGGTAAAACTACCAATCCTGTATTTCAGTCACTGCTTGTACCACACTCATGTGGAGAAAAATGTGGTAGAAGTTTGAAGCCAGAGTGTGGTCATGAATGCGTTTTACTTTGTCATCCAGGGCCTTGTCCTCCTTGTCCTAAAACTGTTACTGTTAAATGTTATTGTGGTGTTCAACCACCAAAAGTCCAGCGATGCAGCAATAAAGAATGGTCATGTGGAAATCCATGCAATAAATTACTAGCTTGTAAAAAACATAAATGTGTGCAGCCATGTCATTCTGGTGAATGTGAACCATGCTCGAAAAAAAGCATTCAGAAATGTTTGTGCGGATCTAGTCAGAAATTACGTGACTGTGCCTCGCCCATCTGGCAATGTGATAAGATTTGCAATAAACCATTGGAATGCGGCTTTCATAATTGCTCTGAAGTATGTCATGTCGGTGAATGTGGAGGTTGTGAATTGTCGAAGCTAAGGACTTGCCCCTGTGGAAAGTCCTCGTTTTTGCTTCCATGCACAGAAGAAACACCAGCATGTGATGACACTTGCCTTAAAGTTTTAGAATGCGGACAGCACGTATGCTATCAAAAGTGTCACAAAGACAAATGCGGAAgtTGTGTGGAAGTAGTAACAAAGACTTGTCAATGTGGATTACATACAAAGGAAGTTCAGTGCAAGAAACCTTTTCTCTGTGAAACCAAATGCAAACAGCTCAAAGATTGTAACAAACATCCTTGTAATCGTAAGTGTTGTGATGGTAATTGTCCTCCATGCGAGAAACCTTGTGGGAGGACCCTCTCCTGTGGCACTCACAAATGCAAGTCAGTATGCCACAGAGGCCCGTGCTACCCTTGTAATTTAACGGAGAAGGTTTTCTGTCGGTGCGGGGGTACTTTTGTGACAGTTCCATGTGGTAAAAAGAATAGGACACGTCCTCCAAAATGCTACAAGCCTTGTTTGTTACCACCAGATTGTCACCATCCAAAAAGGGAGCATCACAACTGTCATTTCAACGATTGTCCACCTTGCAagcaaatttgtaataaatcaCGTGAAAGCTGTGCCCATAATTGCCCTGCACGCTGTCACGCTGCAATCACAGTAAAAATTGAAGGGAAGAAAGGATCCATGCCTTGGGAACAAACGGGGCCGCAATTTGAAGTCAAAGAATTTCCTTGTCCGCCTTGTATTGTTCCTGTATTAGTTACATGCTTAGGTGGACATGAGACTCGTTACTGGCCTTGTCATGCAGCTGTGGCTTCCAGTTGTCAAAGACCATGTGGTCGAGTTCTACTATGTGAAAATCACACTTGCAAGAAACTTTGCCACAATATTATAGCTGCTCCTGATAACATTAAAGCAGGTGAAAATTGTGATGTGTGTGAAAGTGAATGCCTAAAAGTTAGACCAGAAGGTTGTACGCATGCATGTCCGAAACCATGTCATCCAAATGAATGCCCGCCGTGCAAACAAATGTTGCGCATCAAATGCCATTGTGGCCTCAACCAGCCTTACGTACCTTGCAGTGAATGGAACAACATTGAAAGCAGAGAACAGTTGCAATGCTGTGGAAATCAATGCCCGAACAACTACGAGTGCGGGCATCGATGTCGATCCAGCTGTCATTCAGGGCCGTGCCCCAACCCCGAATCATGCAAGAAAAAAGTCAAAGTCTTCTGCAAATGCAAGAGAATTAAAAAGGAGTTTCCTTGTGAAACACTCAGAAAGGGTGAGGCCGTCGTAAACTGCGATGAGATCTGCGAGCAAAAGAAAGAAGAGGAGAGAAAGCAAAAAGAACTGGAGAGGGAGCAGaggaagaaagaagaagatttaaaaaatcagagagAGCTTGAAAAGTACGAGAAAATGTTCCATGGTAAGAAAAAGAATCGAGAGCGTAAGATACAAGAAGAAACCGAGGATAAATCAGTTTTACGTAAATATTGGTTGCTATGTGCGTGTTTCGTTGTTGCTATCTTAGCagttactttttattattatattaatgtGTAG
- Protein Sequence
- MKWLVLFVLAVILVSLAVAEGEIWEEDDHEVLIRNERGAKNTGKKQCRYAKGEWSECDSKTNMRSRTLTLKKGDQKTCEATKTMQKKCRKALHITSLVTRSLLFLACRYERGAWGECNQNQMTRKDKLKPNSDPSCEQNRQITKKCNGSKPTKGKEAKMSEYFKPPKQKNPWAKGKQQQQQNRSTKVTSNNLKNSENKFKEATSKHQAAAQKYAKDYESSSEEEELESQHIIDKILEGYALGEADKENLSRTKNYLEDAFVSGAATCLICISSIKRNDSIWSCSECYCFFHLMCIQRWSKDTITQKKLALEGQVQVKKIKVAWGCPKCRHDYEPADIPTQYLCFCGKTTNPVFQSLLVPHSCGEKCGRSLKPECGHECVLLCHPGPCPPCPKTVTVKCYCGVQPPKVQRCSNKEWSCGNPCNKLLACKKHKCVQPCHSGECEPCSKKSIQKCLCGSSQKLRDCASPIWQCDKICNKPLECGFHNCSEVCHVGECGGCELSKLRTCPCGKSSFLLPCTEETPACDDTCLKVLECGQHVCYQKCHKDKCGSCVEVVTKTCQCGLHTKEVQCKKPFLCETKCKQLKDCNKHPCNRKCCDGNCPPCEKPCGRTLSCGTHKCKSVCHRGPCYPCNLTEKVFCRCGGTFVTVPCGKKNRTRPPKCYKPCLLPPDCHHPKREHHNCHFNDCPPCKQICNKSRESCAHNCPARCHAAITVKIEGKKGSMPWEQTGPQFEVKEFPCPPCIVPVLVTCLGGHETRYWPCHAAVASSCQRPCGRVLLCENHTCKKLCHNIIAAPDNIKAGENCDVCESECLKVRPEGCTHACPKPCHPNECPPCKQMLRIKCHCGLNQPYVPCSEWNNIESREQLQCCGNQCPNNYECGHRCRSSCHSGPCPNPESCKKKVKVFCKCKRIKKEFPCETLRKGEAVVNCDEICEQKKEEERKQKELEREQRKKEEDLKNQRELEKYEKMFHGKKKNRERKIQEETEDKSVLRKYWLLCACFVVAILAVTFYYYINV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01258905;
- 90% Identity
- iTF_01258905;
- 80% Identity
- -