Basic Information

Insect: Dorcus hopei
Gene Symbol: -
Assembly: GCA_033060865.1
Location: CM065425.1:76809400-76820855[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0063 0.7 12.0 0.3 1 21 30 50 30 51 0.94

2 17 0.34 38 6.5 3.3 1 23 57 79 57 79 0.94

3 17 1.6 1.8e+02 4.4 1.1 1 21 263 283 263 284 0.95

4 17 0.21 24 7.1 0.1 2 21 291 310 291 313 0.88

5 17 0.035 3.8 9.6 1.5 3 23 319 339 318 339 0.97

6 17 0.036 3.9 9.6 4.1 1 23 345 368 345 368 0.96

7 17 1.5e-05 0.0016 20.2 1.6 1 23 373 395 373 395 0.97

8 17 0.0031 0.34 12.9 0.4 1 19 1288 1306 1288 1308 0.96

9 17 0.00012 0.013 17.4 0.8 1 23 1313 1335 1313 1335 0.92

10 17 0.054 6 9.0 1.2 1 23 1341 1363 1341 1363 0.98

11 17 0.0045 0.5 12.4 0.1 1 23 1369 1392 1369 1392 0.93

12 17 0.08 8.9 8.5 0.7 1 23 1397 1419 1397 1419 0.96

13 17 0.00084 0.094 14.7 1.8 1 23 1427 1449 1427 1449 0.96

14 17 0.024 2.7 10.1 1.5 1 23 1454 1476 1454 1476 0.97

15 17 6.7e-05 0.0074 18.2 1.1 1 23 1482 1505 1482 1505 0.97

16 17 0.19 22 7.3 5.5 1 23 1510 1532 1510 1532 0.98

17 17 0.07 7.8 8.7 0.8 1 23 1539 1562 1539 1562 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0063	0.7	12.0	0.3	1	21	30	50	30	51	0.94
2	17	0.34	38	6.5	3.3	1	23	57	79	57	79	0.94
3	17	1.6	1.8e+02	4.4	1.1	1	21	263	283	263	284	0.95
4	17	0.21	24	7.1	0.1	2	21	291	310	291	313	0.88
5	17	0.035	3.8	9.6	1.5	3	23	319	339	318	339	0.97
6	17	0.036	3.9	9.6	4.1	1	23	345	368	345	368	0.96
7	17	1.5e-05	0.0016	20.2	1.6	1	23	373	395	373	395	0.97
8	17	0.0031	0.34	12.9	0.4	1	19	1288	1306	1288	1308	0.96
9	17	0.00012	0.013	17.4	0.8	1	23	1313	1335	1313	1335	0.92
10	17	0.054	6	9.0	1.2	1	23	1341	1363	1341	1363	0.98
11	17	0.0045	0.5	12.4	0.1	1	23	1369	1392	1369	1392	0.93
12	17	0.08	8.9	8.5	0.7	1	23	1397	1419	1397	1419	0.96
13	17	0.00084	0.094	14.7	1.8	1	23	1427	1449	1427	1449	0.96
14	17	0.024	2.7	10.1	1.5	1	23	1454	1476	1454	1476	0.97
15	17	6.7e-05	0.0074	18.2	1.1	1	23	1482	1505	1482	1505	0.97
16	17	0.19	22	7.3	5.5	1	23	1510	1532	1510	1532	0.98
17	17	0.07	7.8	8.7	0.8	1	23	1539	1562	1539	1562	0.96

Sequence Information

Coding Sequence: ATGATTGAcgaggtaattaaaaaatccccAAGTTTCTTAAACTGGTTTGGCCTGTTGCACGTCGAATCGGAATCGCTTGCGACCGGATACGCCTGCGAAATTTGCTCGCAAATCTACAGCACGCAGAAGGAGTTCCTTCGCCATTACATGAGGAGGTGCGAGGCGGGTTTCCTGTGCTGCAAGTGTGGCTCGGTCTTCGAAACCACCACCGAGCTGCTGCAGCACCATCAAGCCCACAAAATCGAAGAGATCGTCATCGAGCCAAGACGTATACAATACGAAGAggaagaggaggaggaggaagaagaagaagaggagtaCACAGAGGAGGTCGTGGATGTGCCCCCGGAAAACTCCAACGATCTACTGTATATTTTGGATGATTCGCAGTGCGTAAACGAGGTCGTCATAGAAGAGACGGAACTGCAGCACCATCAAAAAACCACCGACGGCGCCGCGGCTGCCGCCAGTAATAATTTCAACGTGGTCCACGTGGATCACATCTACGGTTACACGATGCCGAGTGTCTTCAAGGGGCAGTTAGAATCGAAGAAGCGTCACACAAAAAAGAAAGAGCTCAAGGAAACGGTCGATAGCGACGACCCCGAGTGCAATAACTTGCTACTGCCGATGGAATCGACCTCCACCAGTCGAAAGCAAGCCTCCCCAAGGCAAGCCTCTCCAAGGGCCAGGGTGGTTCAGGCGAAACGCCGCCATGAAATCCCGGATTTTTCCGCCCCCAGCTACATCATGTTGAACCCCAACGAGGAGGTGGACGTGCCTCACTACAAGTGCTTACGCTGCGAGCAACTGTTCATTAACAAATTCGTCTTCTTCAGGCACATCGAGAAGGGGAAGTGCTTCGTGAACAGCTGCGATGTCTGCACCGCGGTTTTCGAGAAGAACAGCGACTTCTTCGATCATTACGTCGCCGAGCACACGGACCGCGCCATCTGCAACTTTTGCTTCCGCACGTTCATGTACGAGAAGAACGTCAAGGAGCACATGCTGAGGCACCTCGACCAGTTCAGGCATCGCTGTGAGGAGTGCAGCAAGGGATTTTATACGGTGAGGGAGTACCGAAATCACTATAAGAATAGGCACATGGGAATTCGCCATCGATGCGATGAGTGCGGGAGGTCCTTCGCTGATGAGTACTATTTTAAGAGGCACCTGGCCATGCATAAAAGAACTGTGTTGAAAGCAAAGAATAGTAGACAAGAACGACAAGAAGACAGTGGTCGATTATTATCGATAGTCACATCGATTACTATCGATGGTGTCAACTATCGATATTTCTCCACcagactgatttatttcgacctcggtccGAGGTGGAAGTCGTCGGAAACAGCTGTAAAGGCGAAAGCGGGTGCCGTAAAGAAGCCCTTACTTTACGTCATTCAGAAATCCAACGGGGTAATATTGGTGGTCGAAAACCCGGATGGCTCAATCAAACCGGTTAATCTCACCCGCCCCCCCATTAAGAATACAAGAGTTGTTGGCGACGCACCTCAACCTCAAGCAAGAGTTGAAGCAAACCCTGTACATTTCGGCGAAAAATCCGATGTTTTAGACGAGAGAACCAAGCCCTTAGCTCACAATACGGTAAAGTTGCCGGTCAAAATTCCAACTGACAAGGTTAAGCCGGTGCTACCTGCTACTACCCCAAGTATTATTGGCAACACATCTCAAGCAAGAGTTGAGGTCCCTCAAGAAGCGAAACCTGTAAATTCCGTCGCTTTAGACAAGCAAGCCAAGCCCTTAATTCACAACATGGTAATATTTCCGGCCAAAGCTTCGGATGACAAACTTCAACCGGTGCCATCCCCTATTATGACTACAAACATTGTTGGCAACACACCTCAAGCAAGAGTTGAAGTCCCTCAAGAAGCGAAACCTGTAAATTCCGTCGCTTTAGACAAGCAAGCCAAGCCCTTAATTCACAACATGGTAATATTTCCCGCCAAAGCTCCAGGTGACAAAGTTAAACCGGTGACACCCCCTATTATGACTACAAGCATTGTCGGCAACACGCCTCAAGGAAGAGATGAAGTCCCTCAAGAAGCGAAACCAGTAAACTCCGAGAAAAGATCCGTTGCTTCAGACAAACAAGGCAAGGCTTTAATTCACAGCATGGTAATAATTCCGGCCAAAGCTCCAGGTGACAAACTTCAACCGATGCCACCCCCTATTACGACTACAAGCATTGTTGGTAACACACCACAAGCAAAAGTTGAGGCCCCTCAAGAAGCCAAACCAATAAATTTCGAGAAAAGATCCGTTGCTTCAGACAAGCAAGGCAAGGCTTTAATTCACAACATGGTGACATTTCCACCCAAAGCCCCAGGTGACAAAGTTAAACCGGTGCCACCCCCTATTATGACCACAAGCCCACCCCAAGCGAGATATAAAGTACCTCAAGAGGCGAAAGCTGTAAATTCCGGGAAAAAATCCGTCGCTCTAGACCAACAAGCCAAGCCCTTAATTCACAACATGGTGATATTTCCGCCCAAAACTTCAGATGACAAACTTAAGCCGGTGCTACCAGCTACCCCCCCTATTATGAATACAAGCGTCGTTGGCGACACACTTCTGCCTTCAAGAGTTGAAAAATCCGTCGTTTTAGACAAGCAAGTCAACATTGAGAAATCAAATGTAGCAATATTGCCGAATACTTCACATGATAAAGCGGAACAGGTGCTGCTTAATACAACCTCTATCGTTATGAATACAAGCGTTGTTGGCAACACACTTCAAACTGCAAGCGTTGTAGTCCCCCGAGAAGCAAACACTGTTTTAGACAAGCAAGACCCCTTGCTTCACAAAATGGTAATATTGCCGATAAAAACTACAGATGATGAAGTTAAGCCGATGCTATTTCATGTCGTCCCTATTAGGAAAACAAGCGCAGTTGACAACACCCCTCCACCTGGAGCCGAAGAATCCGTTGTTTCGGAAAAGCAAATCGACAACATTGagaaatcaaacaaaattaCTTCAACCCCAACTGTAAGCACAAGCGTTGTTGGCAACACTCTTCAGCCTAAAAGTGTTGAAGCCCCTCAAGAGTCAAAAACTGTAAACTTCGAGAAAAAATCCGTTGTTGTAAACGAGCAAGCCAAGCCCATAATTCACAGCATGGTAATACTACCGGCCAAAAATCCCGATGATAAAGTTAAGCCGGTGGTACTTACTACGACCCCTACTATGAATACAAGCGTCGTTGACGACACACTTCAAACTACAAGAGTTGAACTCCCTCAAGAAGCAAAAACTGCAACAGACAAGCAAGTCGAGCCCTTACGTCACAACATGGTAGTATTGCCGATGAAAACTGCCGATGACAAAGTTAAACCCATGCTGTTTCATGCCATCCCTATTAGGAATCCAAACTTAATCGGCAACATACCTCAACCCCAAGCAAGAGTTGAGGTCCCTCAAGAAGCAGAAGGACCCATCACTCTAGACCAGCAACTCAACCCCCCGCTTCACAACAATCAACAATCAAGCACGGGGGTGATGTTGGTCAAAACTGCGGATGGTAAAATTCAGCCGCTGCTACTTAACATCCCCCCTATTACGAACAGAAGCACTGCTGGCAACGCGCCTCAAACTACGAGAGTCCCCAAGCAAACACAAACTTCACGTTTAGAGAGATACGAGAAGATCAGGGCCCAACGGGAAGCAAGGGGTGCGAAGGAGAAAGAGGCAAAGGAAGAAAGGCGCGCGAAGGAGAAAAAGGCAAAGGAAGAAGTGCGCGCGAGGAAGAAAAAGGCAAAGGAGGAAATGCGCGCGAGGAAGGAAAAGGAAATGGAAGAAATACGCGCGATGGAGGAAAAGGCAAATGAGGAGAAGTTGTACACGTGCAAGATTTGCGACGAGTCATTCCCCTCTGTCGCCAAGTTGAAGTGGCATTCGCATCCTAGAGGAAAATTCACGTGTGCTACGTGCGGGAGATCATACAGCCGTTTGAGTTACTTGCGGAAGCACGAAGGCCTTCACAAGGAGACATCACAATACAGTTGTAAAATTTGCTCTAAACTATTGGAGAATAAGCCCAAGTTTGATGTGCACATGAAAAAGCACAAGGGCGAGTTCACGTATACGTGCGAGGAATGTGGAAAGGGCTACTACAGTGTCGATGCGTACAAGCTGCACATCGACGCAGTACACAAAGGGATACGGTACAAGTGTGACATTTGCGGGTCCGTCTTGCGAAGCCATAGGTATTGGAAAGAGCACGTGGCTAACCACACAAACCCGGACGTAAGAAGGTATCTCTGTCACATCTGCAATCAGTCGTATAGCAGTAAGATAACCCTAAGCCTCCACTTAAAAATCCACTCCGACACACGTTACGTTTGTTCCCTGTGCGGAAAAAAGACGACGCAGAGGGCCGCCCATCAGGCGCACCTTCGGTTTCACAGGGGCCAGAAAGATTTCGTCTGCGAAACTTGCGGCAAAGATTTCACGACGAAACTCATGCTGGTGAGGCACAGGAATAAATCGCACGAGAAGCCGCAATTCCCTTGCCAACACTGCGAATCGATTTTCAAGTCGGAATACTGCCTCCTCGTCCACTTGCACACCCACGATGAGGTCCAGAAGGACTTCCCGTGCGAGACCTGCGAGAAACGATTTTTGAACGTCAACTTTTTGCGTCGCCATGTGAACAGGGTGCACGTCTTAAATCTGCCAGACGAATTTGTCAAGCGACAAACGAAGAGGAAGAGAAAGCGCCGAAGCCTTGACCCCGAAGCGTCGTCCGAATACCCTCACGTTGTTGGCGACGACACTGCGGAAGATTCTGCGCAAGAAATCTTTGAATTTCAAAGCGACCTAGTCACTTCCGATGGACTAGTCGAAGTGTACGATGACGGTGAAGGCGGAGGATCAGAAGCTCAAGCTTCGGAATGTGAAAACTACGAAGTTGATCAAAATTCAAGGGACAATTAG
Protein Sequence: MIDEVIKKSPSFLNWFGLLHVESESLATGYACEICSQIYSTQKEFLRHYMRRCEAGFLCCKCGSVFETTTELLQHHQAHKIEEIVIEPRRIQYEEEEEEEEEEEEEYTEEVVDVPPENSNDLLYILDDSQCVNEVVIEETELQHHQKTTDGAAAAASNNFNVVHVDHIYGYTMPSVFKGQLESKKRHTKKKELKETVDSDDPECNNLLLPMESTSTSRKQASPRQASPRARVVQAKRRHEIPDFSAPSYIMLNPNEEVDVPHYKCLRCEQLFINKFVFFRHIEKGKCFVNSCDVCTAVFEKNSDFFDHYVAEHTDRAICNFCFRTFMYEKNVKEHMLRHLDQFRHRCEECSKGFYTVREYRNHYKNRHMGIRHRCDECGRSFADEYYFKRHLAMHKRTVLKAKNSRQERQEDSGRLLSIVTSITIDGVNYRYFSTRLIYFDLGPRWKSSETAVKAKAGAVKKPLLYVIQKSNGVILVVENPDGSIKPVNLTRPPIKNTRVVGDAPQPQARVEANPVHFGEKSDVLDERTKPLAHNTVKLPVKIPTDKVKPVLPATTPSIIGNTSQARVEVPQEAKPVNSVALDKQAKPLIHNMVIFPAKASDDKLQPVPSPIMTTNIVGNTPQARVEVPQEAKPVNSVALDKQAKPLIHNMVIFPAKAPGDKVKPVTPPIMTTSIVGNTPQGRDEVPQEAKPVNSEKRSVASDKQGKALIHSMVIIPAKAPGDKLQPMPPPITTTSIVGNTPQAKVEAPQEAKPINFEKRSVASDKQGKALIHNMVTFPPKAPGDKVKPVPPPIMTTSPPQARYKVPQEAKAVNSGKKSVALDQQAKPLIHNMVIFPPKTSDDKLKPVLPATPPIMNTSVVGDTLLPSRVEKSVVLDKQVNIEKSNVAILPNTSHDKAEQVLLNTTSIVMNTSVVGNTLQTASVVVPREANTVLDKQDPLLHKMVILPIKTTDDEVKPMLFHVVPIRKTSAVDNTPPPGAEESVVSEKQIDNIEKSNKITSTPTVSTSVVGNTLQPKSVEAPQESKTVNFEKKSVVVNEQAKPIIHSMVILPAKNPDDKVKPVVLTTTPTMNTSVVDDTLQTTRVELPQEAKTATDKQVEPLRHNMVVLPMKTADDKVKPMLFHAIPIRNPNLIGNIPQPQARVEVPQEAEGPITLDQQLNPPLHNNQQSSTGVMLVKTADGKIQPLLLNIPPITNRSTAGNAPQTTRVPKQTQTSRLERYEKIRAQREARGAKEKEAKEERRAKEKKAKEEVRARKKKAKEEMRARKEKEMEEIRAMEEKANEEKLYTCKICDESFPSVAKLKWHSHPRGKFTCATCGRSYSRLSYLRKHEGLHKETSQYSCKICSKLLENKPKFDVHMKKHKGEFTYTCEECGKGYYSVDAYKLHIDAVHKGIRYKCDICGSVLRSHRYWKEHVANHTNPDVRRYLCHICNQSYSSKITLSLHLKIHSDTRYVCSLCGKKTTQRAAHQAHLRFHRGQKDFVCETCGKDFTTKLMLVRHRNKSHEKPQFPCQHCESIFKSEYCLLVHLHTHDEVQKDFPCETCEKRFLNVNFLRRHVNRVHVLNLPDEFVKRQTKRKRKRRSLDPEASSEYPHVVGDDTAEDSAQEIFEFQSDLVTSDGLVEVYDDGEGGGSEAQASECENYEVDQNSRDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -