Basic Information

Insect: Dorcus hopei
Gene Symbol: Zfpm1
Assembly: GCA_033060865.1
Location: CM065425.1:21841576-21844638[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 4.7 5.2e+02 2.9 0.1 2 23 7 28 6 28 0.92

2 15 0.14 16 7.7 3.1 1 23 529 552 529 552 0.93

3 15 0.013 1.5 10.9 0.1 2 23 640 662 639 662 0.93

4 15 0.00046 0.051 15.5 1.2 1 23 670 692 670 692 0.98

5 15 0.00016 0.017 17.0 1.3 2 23 695 716 694 716 0.97

6 15 0.46 51 6.1 1.2 1 10 722 731 722 744 0.82

7 15 0.00015 0.017 17.0 5.1 2 23 751 772 750 773 0.95

8 15 0.87 96 5.2 1.3 6 23 787 804 785 804 0.95

9 15 0.00014 0.015 17.2 2.2 3 23 811 832 810 832 0.97

10 15 0.36 40 6.4 0.0 2 23 848 868 847 868 0.96

11 15 0.00028 0.031 16.2 1.4 1 20 874 893 874 896 0.92

12 15 0.00016 0.018 17.0 0.4 1 23 904 926 904 926 0.98

13 15 0.00061 0.067 15.2 3.5 1 23 932 954 932 954 0.98

14 15 1.3e-06 0.00014 23.6 3.7 1 23 960 982 960 982 0.98

15 15 0.00095 0.1 14.5 6.4 1 23 988 1010 988 1011 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	4.7	5.2e+02	2.9	0.1	2	23	7	28	6	28	0.92
2	15	0.14	16	7.7	3.1	1	23	529	552	529	552	0.93
3	15	0.013	1.5	10.9	0.1	2	23	640	662	639	662	0.93
4	15	0.00046	0.051	15.5	1.2	1	23	670	692	670	692	0.98
5	15	0.00016	0.017	17.0	1.3	2	23	695	716	694	716	0.97
6	15	0.46	51	6.1	1.2	1	10	722	731	722	744	0.82
7	15	0.00015	0.017	17.0	5.1	2	23	751	772	750	773	0.95
8	15	0.87	96	5.2	1.3	6	23	787	804	785	804	0.95
9	15	0.00014	0.015	17.2	2.2	3	23	811	832	810	832	0.97
10	15	0.36	40	6.4	0.0	2	23	848	868	847	868	0.96
11	15	0.00028	0.031	16.2	1.4	1	20	874	893	874	896	0.92
12	15	0.00016	0.018	17.0	0.4	1	23	904	926	904	926	0.98
13	15	0.00061	0.067	15.2	3.5	1	23	932	954	932	954	0.98
14	15	1.3e-06	0.00014	23.6	3.7	1	23	960	982	960	982	0.98
15	15	0.00095	0.1	14.5	6.4	1	23	988	1010	988	1011	0.95

Sequence Information

Coding Sequence: ATGGATTCAGAAAACGTGGTATGCCCCGTCTGTACCCTATTTTTACGTCCGGGGATCACGTTAAAGTCACATCTGACCAGCCATCCGAAACATAAAGTAATCGAAGCACTTGTCCGATTATCAAACCCCGAGAGTTCTCAGAAGACGCTAGAAAATGTCAGTCAGAGTGAAACAGGTTCACAATCGACGAGCGGTTCTGCGAATAATACTGCGTGGAACCAAAATGTGCTCCCGGCTAATGCACCTGCGCCAAATTTCAGTGCAATACCAGGTAATCACTCATTTATTTACCAACAGTTTATGAGTTCAACAAGTCCCCAAACAAATGTGTTGAATATAAATCCACTGACACAACAAGTTGTAACTATTCCAGCTGTATTTAATTCACAAATGATGTGCCCTCCATATGTATATCAACAACAACAAGTGATAATGTCCAGTGGTCCATCTATAATGCCACTATTGCCACGCTCCTTACCCATAGAATTGCCGGCATCATCTCAGTCTAGTTTGCAAGAACATGTGGAAGACGTCAGTTCAATTACAATAGAAAATGAAGATAACGAGGAAGATGAACCGGACTTAGTCGATATCGACATTGAAAAGACTAATGTGACGATCAGTGTCGAAACCAAACCAAAACAAGATGAACACATGCTAGATCGCCCAAAGGATGAAATTGATTTGAAGCcgaataaatttgaatattcccaagataataaagaaaatgagtgTAAGAAAACTATTGATTGTGAAACTGGTACTTCCGACTGTAATTTGACAACAGATGAATACACCGAGCATAACACAAATTCCCCGCATTCAAATGGAGACTTAGATTGGAACATCCGTGTAAGCAATGAACTGGACAAATCGTGTCAGacacaaattaataattacactGACATCCAAGAGCCTGAGAGTATTGAACGAATCTCTCAACAAATGGAATGCAAGCCTGATTGTTATTATGCGGATACTATCGTTAGCAGTGCGAATTATGCTGTGTTGCAAAATAGTTACAGTCAACACGAGCCTACGTACACAGTAGCTGAAAATCataatgaaaatatgtatgGTGCGCATACACAAGATTCTAACAACATAATCGACATGGATGGGATGAACTTATTGATAAGCAATGAATTTTTGAATAATCAGCTTGTATCACAAGTGGAAGACTTTGATTGCGTAAGTTCTGAAAGACCGAGGGTTTTAATGAATATTGGAGGTATAGAAACAAATTTTGCAGATCACAGAGAAGTTGGCGACGAGAGCTTGTCGAGAGAAAGCACAAATATAAGAGCAGATGAACACATGCCACCTCGTGGTGAACTCTCAGGCCAAGAAAGCAACGGAGGCACAAGCGATTTGAACTGGAATCGCATTCAGTATCATGAGGGTAGTTGTGGCATGTCCGTTTGCACTTCTTATGACCTCATCGCCAGAGAAACCTGGGATGGGTCTGATGTGTCAGATACGGAAGCGCAACCGGTACAAAATCAAAGTTCTCCACCTGCTTATATTTCATATGATAACGATGATACACCTACagtgtcaggttttcgagaacCACCCATAACATACAAGTGTCCAACCTGCAACGAGTCCTTCAATTGTCCCAAGGAACGCCGCCTACATCAAAAGGAACAACATGATAAACTTGAAGAGAAAACAAAGTCAAACGATATAATTGGTTCACAGTTAGGGACTAAACGTGTGAAGAAACTTGTAATTAAGCCAAAAAAGTCAGAGATTAAAACTGAGAATAACTTTGATAATGTATTTACCAATAAACTAAAAATTGAAAGcaatttagaaaatgaaaattatgatCGAGTTTCTGTAATTCTACCCCCGAATAGTTCACAAGTGGAAATTCAGAAGTCAGAGGAAGTCCTTGTGAATGACCCACTTATTTGCACCATGTGCAACACAGTCATTTCTGACAGTAATGCTCTTAAACAACATCAGCTGGAAGTACACAAATTTTCTTCTGACATTAGACATAAGTGTAGCACCTGCGGAGAATCATTtccaaatgaaattaaatacacCGAGCATTTAAAAGTACATCCTTTAGAATGCCGCTTGTGTGGAAAGTACTTTTACAGAAGACCTAACATGCAGTTGCATATGAAACGTCACTTGGGTATTAGGCCATACAAGTGTAATATTTGTCAAAAAGCATTTCTTACCAAGCAAAAACATGATGAGCACAAAAATATTCACACAGGCAATGCTccaataaaatgtaatttatgtGAAGAAACTTTCAGAAGGCATTCAAATTTGGTGCAGCATAGGAATCGTCatcatttcaatttgaagaaAAAGCTAAAGGATTATGTATGCTTCTGTGGGGAAATTTTTCATTCAAAGAAGAAACTAGCTTGGCACAAGGAGATACATGATGCAAAACCTAAAGCATGTTCTCAGTGCAGCGAAAAATTTATTCACATGTCGAGCTTAACTAGGCACATGAGACGAGCACATAATGAACGTTTTGTGCCAAACAAGGAACGCCACAATGAAAATGTGGAGTGCCCCATTTGTAAGGGTGTATATCTGCGTTCTTCTCTCGACGTTCACATTCGTAACCACAGCGGACAACGACCTTTCACTTGCCTAATTTGTAACAAAGATTTTACAACTAAGTGGAACCTAAAGTTGCATAAGTGGACCCACGCGTCACGCATGTCCAAACCATTCAGGTGCGATCAGTGTAAAGGTGCATTTATAAGGGAATCCGATTACACAGCCCATATGAACTCGCATAAGAGCATCAAACCTTATACTTGCAATTATTGTGGAGCACAATTCATTCGAAAGTACAACTGTCAGAGACATGTTAGGGAACATGAGAAAGACAAAACTTTTTCTTGTCAAGTGTGTGGTAAAACATTTCACAGGTCCTACTACCTTAAGGATCACATGAGAGTGCACAGTGGTTTACGTCCCTATGCATGTCACATTTGTGGAAAAACATCCACTACTAAGTCGAATCATAACAAACACGTTAGAATACACCATGCCAGAGAACCGGTTAGTACAGAAAATTAG
Protein Sequence: MDSENVVCPVCTLFLRPGITLKSHLTSHPKHKVIEALVRLSNPESSQKTLENVSQSETGSQSTSGSANNTAWNQNVLPANAPAPNFSAIPGNHSFIYQQFMSSTSPQTNVLNINPLTQQVVTIPAVFNSQMMCPPYVYQQQQVIMSSGPSIMPLLPRSLPIELPASSQSSLQEHVEDVSSITIENEDNEEDEPDLVDIDIEKTNVTISVETKPKQDEHMLDRPKDEIDLKPNKFEYSQDNKENECKKTIDCETGTSDCNLTTDEYTEHNTNSPHSNGDLDWNIRVSNELDKSCQTQINNYTDIQEPESIERISQQMECKPDCYYADTIVSSANYAVLQNSYSQHEPTYTVAENHNENMYGAHTQDSNNIIDMDGMNLLISNEFLNNQLVSQVEDFDCVSSERPRVLMNIGGIETNFADHREVGDESLSRESTNIRADEHMPPRGELSGQESNGGTSDLNWNRIQYHEGSCGMSVCTSYDLIARETWDGSDVSDTEAQPVQNQSSPPAYISYDNDDTPTVSGFREPPITYKCPTCNESFNCPKERRLHQKEQHDKLEEKTKSNDIIGSQLGTKRVKKLVIKPKKSEIKTENNFDNVFTNKLKIESNLENENYDRVSVILPPNSSQVEIQKSEEVLVNDPLICTMCNTVISDSNALKQHQLEVHKFSSDIRHKCSTCGESFPNEIKYTEHLKVHPLECRLCGKYFYRRPNMQLHMKRHLGIRPYKCNICQKAFLTKQKHDEHKNIHTGNAPIKCNLCEETFRRHSNLVQHRNRHHFNLKKKLKDYVCFCGEIFHSKKKLAWHKEIHDAKPKACSQCSEKFIHMSSLTRHMRRAHNERFVPNKERHNENVECPICKGVYLRSSLDVHIRNHSGQRPFTCLICNKDFTTKWNLKLHKWTHASRMSKPFRCDQCKGAFIRESDYTAHMNSHKSIKPYTCNYCGAQFIRKYNCQRHVREHEKDKTFSCQVCGKTFHRSYYLKDHMRVHSGLRPYACHICGKTSTTKSNHNKHVRIHHAREPVSTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01258433; iTF_00466736;
90% Identity: iTF_00466736;
80% Identity: -