Dhop036751.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus hopei
Gene Symbol
ZNF639
Assembly
GCA_033060865.1
Location
CM065425.1:76780383-76783751[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.069 7.6 8.7 0.1 1 23 54 76 54 76 0.99
2 21 0.13 14 7.9 6.3 1 23 80 102 80 102 0.96
3 21 0.0044 0.49 12.4 0.0 2 23 109 131 108 131 0.94
4 21 0.035 3.8 9.6 1.4 1 23 137 159 137 159 0.91
5 21 0.032 3.5 9.8 0.0 1 23 165 188 165 188 0.96
6 21 4.8e-06 0.00053 21.8 1.4 1 23 198 221 198 221 0.98
7 21 5.3e-06 0.00059 21.6 3.5 3 23 229 249 227 249 0.96
8 21 1.3e-05 0.0014 20.4 2.7 1 23 255 277 255 277 0.99
9 21 1.8e-06 0.0002 23.1 0.6 1 23 283 305 283 305 0.99
10 21 0.044 4.9 9.3 0.0 1 21 311 331 311 332 0.95
11 21 0.26 28 6.9 2.2 2 23 363 385 362 386 0.94
12 21 0.35 39 6.5 0.0 1 23 401 423 401 423 0.98
13 21 0.88 98 5.2 8.8 1 23 427 449 427 449 0.96
14 21 0.0044 0.49 12.4 0.0 2 23 456 478 455 478 0.94
15 21 0.44 48 6.2 1.5 1 22 484 505 484 506 0.87
16 21 0.11 13 8.0 0.1 1 23 512 535 512 535 0.95
17 21 3.8e-05 0.0043 18.9 1.6 2 23 546 568 545 568 0.97
18 21 1.3e-05 0.0014 20.5 3.7 3 23 576 596 574 596 0.96
19 21 1.1e-05 0.0012 20.6 3.9 1 23 602 624 602 624 0.99
20 21 1.7e-07 1.9e-05 26.3 1.0 1 23 630 652 630 652 0.98
21 21 0.0033 0.36 12.9 0.1 1 21 658 678 658 679 0.95

Sequence Information

Coding Sequence
ATGAATAAACCGGACCTATATGCTGTGAAGCTTTTGGAAAGACTAAAACGCTGGTCGAGGCAAAATCCTCTCCAAAGAAGAACACACATAGAGCTCGTGCTGCAGCATCGCAGAGACGATGAGCACGATCGTACCTACTACACCTACCTAGACGAGGTTTATCGTTGCAAGTTGTGTAGCGTCGCGGTGCCCTCGAAGATAGAGATCGAAAACCACTTGCTCACCCACGCTGATTTTCATGCTTGCACCTTTTGCGAGCAGAGCTTCACTTCGACCCACAGATACTTGCAGCACTTAAAGACTCACACATCGGACGATCCGACTTCGTGTCCGTTTTGCGACTTAAAAGCGAGCACTCCGGATAGCCTCGTGGTTCACATGAACGCAGcgcatttgaaaaattttccctACTATTGCGCGCAGTGCGATAAGGGTTTCTTCCAAAAGGATGTCTTTAAGGAACACGAAGATTTTCACGCGCTTGGTAAAAAATTCGTTTGCGTCGTGTGCGGTTCGAAGTCCTCGTATTGGCGAGGTCTCTTGGCCCATCAGATTCGGGCTCATACCGTTTCGACTACCGAACAGGTCAAGTATGAATGCGGGATGTGTACGAGACACTATGCCAGGGCCGAGAACTTGGAAAAACACATGCGGATGAAGCACAAGGAGTTCAGGCCTCACCTATGCGATAACTGCGGCAAGAGTTTCAAAGATAAGACGTCGCTAAGATTGCATTATAGGATGCACACGGGAGAGAAGCCCTTTAAATGTGGTCACTGCGAGAAGAGTTTCTCCAAAAAGCCTTACTTGGTATTGCACGTGCGTActcataccggcgagaagccttACACCTGCGAGTACTGCAGCAAGTCGTTTAGCCAGCCCACACCGCTTAGGATTCACGTGCGATCGCATACGGGCGAGAAACCATTTGTCTGTCAGATTTGTTCGGCAGCTTATCCTGTTAGGGCTTCGCTAACGGCGCACTATAAAGGAGAAATTGAAGATGCCGTGAAGCTTTTGGAAAGACTAAAACGCTGGGCGACGCAAATTCCCCCCCAAAGAAGAACGCTCGGACGGAACTGGCATTGCCGAGAGTGCAACCAAAGATTTGCAAGTATCGAGCTCGTGCTGCAACATCGCAGATACGTCCACCACGACGAGCACGATCATATCTACTACACGTACCTGGATGAAGTTTATCGTTGCAAGTTGTGTAGCGTCGCGGCGCCCTCGAAGATAGAGATCGAGAGCCACTTGCTCACCCACGCTGATTTTCACTTTTGCACCTTTTGCGAGCAGCACTTCACTTCGACCCACGGATACCTGCAGCACTTAAAGACTCACACCTCGGACGATCCGACTTCCTGTCCGTTTTGCGACTTAAAAGCGAGCACTCCGGATAGCCTCGTGGTTCACATGAACGCAGcgcatttgaaaaattttccctACTATTGCATGCAGTGCGATAAGGGTTTCTTCCAAGAGAATGTCTTTAAGGAACACGAAGATTTTCACGTGTTTGGTAGAAAATTCGCTTGCGTCGTGTGCGGTTCGAAATCTTCTTATTCGCGAGGTCTCTTGGCTCATCAGATTCGGGCACATACCGTTTGGACTACCGAACAGGTCAAAAATCAGTGCGGGATGTGTAAGAGGCACTTTGCTAACGCCGAGAACTTGGAGAAACACGTGCGGATGAAGCACAAGGAGTTGAGGCCTCACCTCTGCGATAACTGCGGCAAGCGTTTCACGACTAAGACGAAGCTAAGAGTGCATTATAGGATTCACACGGGCGAGAAGCCCTTTAAATGTGGCTACTGCGAGAAGTGTTTCTCCAAAAAGGAGTACCTAGTATTGCACGTGCGTActcataccggcgagaagccttACACCTGCGAGTACTGCAGCAAGTCGTTTAGCCAGCCCTCGACGCTCAAAATTCACGTGCGATTGCACACAGGAGAAAAGCCCTATGTTTGTCAGATGTGTTCAACTGCTTACTCTGTTAAGGCATCGCTAACGGCACATTATAATTCCTGCAAGGGAAAATAA
Protein Sequence
MNKPDLYAVKLLERLKRWSRQNPLQRRTHIELVLQHRRDDEHDRTYYTYLDEVYRCKLCSVAVPSKIEIENHLLTHADFHACTFCEQSFTSTHRYLQHLKTHTSDDPTSCPFCDLKASTPDSLVVHMNAAHLKNFPYYCAQCDKGFFQKDVFKEHEDFHALGKKFVCVVCGSKSSYWRGLLAHQIRAHTVSTTEQVKYECGMCTRHYARAENLEKHMRMKHKEFRPHLCDNCGKSFKDKTSLRLHYRMHTGEKPFKCGHCEKSFSKKPYLVLHVRTHTGEKPYTCEYCSKSFSQPTPLRIHVRSHTGEKPFVCQICSAAYPVRASLTAHYKGEIEDAVKLLERLKRWATQIPPQRRTLGRNWHCRECNQRFASIELVLQHRRYVHHDEHDHIYYTYLDEVYRCKLCSVAAPSKIEIESHLLTHADFHFCTFCEQHFTSTHGYLQHLKTHTSDDPTSCPFCDLKASTPDSLVVHMNAAHLKNFPYYCMQCDKGFFQENVFKEHEDFHVFGRKFACVVCGSKSSYSRGLLAHQIRAHTVWTTEQVKNQCGMCKRHFANAENLEKHVRMKHKELRPHLCDNCGKRFTTKTKLRVHYRIHTGEKPFKCGYCEKCFSKKEYLVLHVRTHTGEKPYTCEYCSKSFSQPSTLKIHVRLHTGEKPYVCQMCSTAYSVKASLTAHYNSCKGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
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80% Identity
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