Basic Information

Insect: Dorcus hopei
Gene Symbol: -
Assembly: GCA_033060865.1
Location: CM065425.1:76715635-76724037[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.00093 0.1 14.6 0.1 2 23 74 95 73 95 0.91

2 32 0.0018 0.19 13.7 4.3 1 23 101 123 101 123 0.97

3 32 0.25 27 6.9 1.1 1 21 129 149 129 151 0.84

4 32 0.00013 0.014 17.3 2.1 1 23 157 180 157 180 0.98

5 32 0.0073 0.81 11.8 3.8 1 23 192 215 192 215 0.94

6 32 6.3e-06 0.0007 21.4 2.9 1 23 252 274 252 274 0.99

7 32 5.4e-06 0.00059 21.6 1.8 1 23 280 302 280 302 0.98

8 32 0.065 7.2 8.8 0.1 2 23 391 412 390 412 0.88

9 32 0.019 2.1 10.4 7.7 1 23 418 440 418 440 0.98

10 32 2.1 2.3e+02 4.0 2.6 1 20 446 465 446 468 0.81

11 32 0.0047 0.52 12.4 0.7 1 23 474 497 474 497 0.97

12 32 9.8e-05 0.011 17.6 1.7 1 23 509 532 509 532 0.95

13 32 1.1 1.2e+02 4.9 1.5 3 23 543 563 542 563 0.97

14 32 0.00052 0.058 15.4 5.2 1 23 569 591 569 591 0.98

15 32 5.5e-06 0.00061 21.6 1.7 1 23 597 619 597 619 0.98

16 32 0.0037 0.41 12.7 0.1 2 23 760 781 759 781 0.88

17 32 0.023 2.6 10.2 10.2 1 23 787 809 787 809 0.98

18 32 1.4 1.5e+02 4.6 3.7 1 21 815 835 815 837 0.86

19 32 0.00018 0.02 16.8 1.2 1 23 843 866 843 866 0.98

20 32 0.0015 0.16 14.0 2.0 1 23 878 901 878 901 0.95

21 32 1.2 1.3e+02 4.8 1.4 3 23 912 932 911 932 0.97

22 32 9.3e-05 0.01 17.7 1.6 1 23 938 960 938 960 0.98

23 32 1.2e-05 0.0013 20.5 2.5 1 23 966 988 966 988 0.97

24 32 0.0037 0.41 12.7 0.1 2 23 1086 1107 1085 1107 0.88

25 32 0.13 14 7.8 8.9 1 23 1113 1135 1113 1135 0.98

26 32 0.53 59 5.9 1.5 1 21 1141 1161 1141 1163 0.83

27 32 0.00016 0.017 17.0 1.5 1 23 1169 1192 1169 1192 0.98

28 32 0.00041 0.045 15.7 2.9 1 23 1204 1227 1204 1227 0.95

29 32 0.0036 0.39 12.7 0.6 3 23 1238 1258 1237 1258 0.98

30 32 0.00013 0.015 17.2 3.7 1 23 1264 1286 1264 1286 0.97

31 32 1.6e-06 0.00018 23.3 1.8 1 23 1292 1314 1292 1314 0.98

32 32 0.13 15 7.8 0.0 1 21 1320 1340 1320 1341 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.00093	0.1	14.6	0.1	2	23	74	95	73	95	0.91
2	32	0.0018	0.19	13.7	4.3	1	23	101	123	101	123	0.97
3	32	0.25	27	6.9	1.1	1	21	129	149	129	151	0.84
4	32	0.00013	0.014	17.3	2.1	1	23	157	180	157	180	0.98
5	32	0.0073	0.81	11.8	3.8	1	23	192	215	192	215	0.94
6	32	6.3e-06	0.0007	21.4	2.9	1	23	252	274	252	274	0.99
7	32	5.4e-06	0.00059	21.6	1.8	1	23	280	302	280	302	0.98
8	32	0.065	7.2	8.8	0.1	2	23	391	412	390	412	0.88
9	32	0.019	2.1	10.4	7.7	1	23	418	440	418	440	0.98
10	32	2.1	2.3e+02	4.0	2.6	1	20	446	465	446	468	0.81
11	32	0.0047	0.52	12.4	0.7	1	23	474	497	474	497	0.97
12	32	9.8e-05	0.011	17.6	1.7	1	23	509	532	509	532	0.95
13	32	1.1	1.2e+02	4.9	1.5	3	23	543	563	542	563	0.97
14	32	0.00052	0.058	15.4	5.2	1	23	569	591	569	591	0.98
15	32	5.5e-06	0.00061	21.6	1.7	1	23	597	619	597	619	0.98
16	32	0.0037	0.41	12.7	0.1	2	23	760	781	759	781	0.88
17	32	0.023	2.6	10.2	10.2	1	23	787	809	787	809	0.98
18	32	1.4	1.5e+02	4.6	3.7	1	21	815	835	815	837	0.86
19	32	0.00018	0.02	16.8	1.2	1	23	843	866	843	866	0.98
20	32	0.0015	0.16	14.0	2.0	1	23	878	901	878	901	0.95
21	32	1.2	1.3e+02	4.8	1.4	3	23	912	932	911	932	0.97
22	32	9.3e-05	0.01	17.7	1.6	1	23	938	960	938	960	0.98
23	32	1.2e-05	0.0013	20.5	2.5	1	23	966	988	966	988	0.97
24	32	0.0037	0.41	12.7	0.1	2	23	1086	1107	1085	1107	0.88
25	32	0.13	14	7.8	8.9	1	23	1113	1135	1113	1135	0.98
26	32	0.53	59	5.9	1.5	1	21	1141	1161	1141	1163	0.83
27	32	0.00016	0.017	17.0	1.5	1	23	1169	1192	1169	1192	0.98
28	32	0.00041	0.045	15.7	2.9	1	23	1204	1227	1204	1227	0.95
29	32	0.0036	0.39	12.7	0.6	3	23	1238	1258	1237	1258	0.98
30	32	0.00013	0.015	17.2	3.7	1	23	1264	1286	1264	1286	0.97
31	32	1.6e-06	0.00018	23.3	1.8	1	23	1292	1314	1292	1314	0.98
32	32	0.13	15	7.8	0.0	1	21	1320	1340	1320	1341	0.93

Sequence Information

Coding Sequence: atgtattttatgACGTTCGAAAGCGCCCTAACACGTATACCTGCGTGCTCAGAGGTGTTCATCAAAGAAGATCCTGACGCCACGTTCTACGCAACGGAAAATCATTCAGAGCTACAAAATACCACGGAGATCAAGGCGAGATTGAAACGGCGATTGAGAAAGCAGAAACGAGTGAAGAAAACTCACGCTTCGGACGTGAACGAGCTCAGTCAAGCGATCGAGTGCGAAATTTGCGACAAAACTTTCAAGGACAACGTAGATTTCGCGTTGCACTCAATCGCGCACAGCACTAACAAAAAATTCGCGTGCCACATGTGCGAGTACTCGTGCGTTTCGAAGTACAACTTCACGATGCACATACGCGCGCACGAAGGTAGCACTCAGCACAAGTGTGAGATCTGCAACCAGGCTTTCATCACCAGGGCTTTCGCAATCGAGCACAAGTACTTTCACACCGGCGAGACGCCCTTCCAATGTGAAGTCTGCGGCAAAAGTTTCATGTACTCCCGATTTCTATCTTCTCATCGGCGATCGCAACACTGGGAGGTTGCAACGGGGACACCCTTGGTCAACTACGACTGCCTCATTTGTAACAAGCACTATAAGACGTCGGCGGGTCTTAAACAACACAAGAAATTCAAACATGATGAGGTACAGGTCGAATCTTCCGTGCTGTGCCATATCTGCGGGAAAGTCCTGTCTTGCATGGAGAGTCTGAAGTTCCACAGCAGGACTCACACGGGCTATAAACCGTACACGTGCAAGTTTTGCAGCAAGTCTTTCACGCGTAGGGAGCAACTTAAGGAGCACGAGAGAGTGCACACGGGAGAGAAACCGTTCGTCTGCAAGTTCTGCGAGAAAGGCTTCACGCAGAGAAGTTCCCTAAAGATACACGAGAGGACTCACACCGGTGAACGGCCTTACGTGTGCAGGTTATGCGGCAAGGGGCCACTAACACGCAGATTACCAAATCCCGATTTGTTGATTAAAGAAGAGACCAAAGTCACCGCCTGCGCAACGGCCAATCATGCCGAGCAACAAAACGCGGAGATCAAAGCGATTTTGAGACGAAAGCGACGGCGTGAATTAAGGCAGCTGAAACGCCTGAAGCAACTCGACGGTTCTGGTTCGGACAAAGCCGGTGATGTGGACGAGGTCAGTCAAGCGATCGAGTGCGAAATTTGCGTTAAAACTTTCAAAAACAACATGGATTTCGGACTGCACTCGATTGAGCACAGCGCCGATAAAAAATTTTCCTGCCACATGTGCAAGTTCGCGTGCATCACGAAATCCCACTTCACGATGCACATCCGCGCACATGAAGGAAACACTCAACATAAGTGCGAAATTTGTAAGCAGGCTTTCGTCAAGAAGACTTTCGCACTCGAGCACAAGTACTttcacaccggcgagaaaccgttcgagtGCGAAGTTTGCGGTAAAAAATTCATGTACTCCCGAATCTTAGCTTCCCACCGGCGGTCACAGCATTGGGAGATTGTGACCGGCACGCCTTTCATTAAGTACGACTGCCCCATTTGCAGTAAACATTACAGGAGCGCATCGGGTTTGAAGCGTCACAAAATTAGTAAACACGATGACGTAGACGTTGAAGCTTCCGTGTTGTGTGACGTTTGCGGGAAAAGGCTGTCGTGTGGGGAGACCCTGAAGTTACACAGGAGGATTCACACAGGTTATAAGCCGTACACGTGCAAGTTTTGCAGCAAGACCTTCACACATAGGGAGCGACTTAAGGAACACGAGAGGGTACACACGGGAGAAAAACCGTTCGTCTGCAAGTTCTGCGAGAAAGGCTTTACACAGAGAAGTTCCTTGAGGATACATGAGAGGACCCACACCGGTGAACGGCCTTACGTGTGCAGATTATGCAGCAAAGGACCGAGCGCTGCGAGGGCGAGGCGAGAGGGCCTTGGGTGGGACGAGAACATCGGGTACACTCTCGCGCTCGGTTGGTCTCGGGTCacctcggcgagcgtgtactgccggcatGACGGAATACACGAGAGGCTCGTGTCAGGCTGGAGAGGGTCGGCCGAAGGTCATCTTACACGCAGATTGGCGAACTCAGATTTGCTTGTTAAAGAAGAGCCTACTATTACTGTCTTTGCAAGGGGCACTCGTGCAGAGCAAGAAAATTCGGAGATCAAAGCGATGTTAAGACGGAAGCGAAGGCGCGAATTAAGAAACCAGAAACGCCTGAAgcaaaataatgatttggacaaAGCCGGTGACGTGAACGAGGTCAATCAAGCGATCGAGTGCGAAATTTGCGATAAGACTTTCAAGGACAACGTAGATTTCGGGTTGCACTCAATCGAGCACAGCGCCGATAAAAAATTCTCGTGCCACATGTGCAAGTACACGTGCGTTTCGAAATTCCACTTCAAGAAGCACATCCGCGCGCATGAACTTAACACTCAACATAAGTGCGAGATTTGTGAGCAGGCTTTCGTCAGGAAGACTTGCGCACTCGAGCACAAGTACTttcacaccggcgagaaaccgttccaGTGTGAAGTTTGCGGTAAAAACTTCATGTACTCCCGACTTTTGGCTTACCATCGGCGGTCACAACATTGGGAGACTGTGACCGGCACGCCTTTCGTTATGTACGACTGCCTCATTTGCAGTAAACATTACAGGAGCGCATCGGGTTTGAAGCGTCATAACATTACTAAACACGGTGACGTAGACGTTGAGGCTTCCGTGTTGTGCGACGTTTGCGGGAAAAGGCTGTCGTGTGGGGAGACCCTGAGATTACACAGAAGGATTCACACGGGTTATAAACCATACACGTGCAAGTTTTGCAGCAAGTCCTTCCCAAATAGTGAGCGACTTAAGGAACACGAAAGGGTTCACACGGGAGAGAAGCCGTTCGCCTGCAAGTTCTGCAAGAAAGGCTTCACGCAGAGAAGTTCCTTGAAGATACATGAGAGGACCCACACCGGTGAACGACCTTACGTGTGCAGATTATGCGGCAAGGGGTCGGCCGAAGCTCAACTTCCACGCAGATTGGCGAACTCagatttgtttgttaaagaggAGCCTAGTGTTACTGTCTACGCTAGGAGCAAACGTGCAGAGCAACATAATTCGGAGAACAAAGCGATATTGAGACGTAAGCGAAGGCGCGAATTAAGAAATCAGAAACGTTTGCAGCAAAATGATAAACGCTTGAAGCAAAGTGATGATTTGGACAAAGCGGGTGACGTCAACGAGGTCAATCAGGCGATCGAGTGCGAAATTTGCGATAAGACTTTCAAGGACAACGTAGATTTCGGGTTGCACTCGATCGAGCACAGCGCCAATAAAAAGTTCTCCTGTCACATGTGCAGGTACACGTGCGTTTCGAAATTCCACTTCACGATGCACATACGCGCGCACGAGGGTAACACTCAACACAAGTGCGAGATTTGCAAGCAGGCTTTCGTCACCAGGATTTACGCACTCGAGCACAAGTACTttcacaccggcgagaaaccgttccaGTGTGAAGTTTGCGGCAAAGGCTTCATGTACTCGCGTTTTCTAAATTCCCATCGGCGGTCGCAGCACTGGGAGATAATGACCGGTACGCCTCTGGTTAAGTACGACTGCCTCATTTGCAATAAACATTACACGAGCTCATCGGGTTTGAAGCGTCATAAGATCAGCAAGCACGATGTTGTAGGTGCTGAAATTTCCGTCCTATGCGATATCTGCGGGAAGAGGCTGGCCAGTAAGGAGAATCTAAAATTCCACCGCAGAATCCACACGGGTTATAAACCGCACTCGTGCGAGTTTTGCAGCAAGTCTTTCACGAAAAAGGAACAACTTAAGGAACACGAAAGGGTTCATACGGGAGAAAGACCGTTCGTCTGCAAGTTCTGCGACAAAGGCTTCACGCAGAGAAGTTCCTTGAGGATACATGAGAGGACTCACACCGGTGAACGGCCTTACGTGTGCAGATTATGCGGCAAAGGGTACATTTCTAAAGGCGTCATGGATATACACATGAAAAACTGCCAAGGCAGATAA
Protein Sequence: MYFMTFESALTRIPACSEVFIKEDPDATFYATENHSELQNTTEIKARLKRRLRKQKRVKKTHASDVNELSQAIECEICDKTFKDNVDFALHSIAHSTNKKFACHMCEYSCVSKYNFTMHIRAHEGSTQHKCEICNQAFITRAFAIEHKYFHTGETPFQCEVCGKSFMYSRFLSSHRRSQHWEVATGTPLVNYDCLICNKHYKTSAGLKQHKKFKHDEVQVESSVLCHICGKVLSCMESLKFHSRTHTGYKPYTCKFCSKSFTRREQLKEHERVHTGEKPFVCKFCEKGFTQRSSLKIHERTHTGERPYVCRLCGKGPLTRRLPNPDLLIKEETKVTACATANHAEQQNAEIKAILRRKRRRELRQLKRLKQLDGSGSDKAGDVDEVSQAIECEICVKTFKNNMDFGLHSIEHSADKKFSCHMCKFACITKSHFTMHIRAHEGNTQHKCEICKQAFVKKTFALEHKYFHTGEKPFECEVCGKKFMYSRILASHRRSQHWEIVTGTPFIKYDCPICSKHYRSASGLKRHKISKHDDVDVEASVLCDVCGKRLSCGETLKLHRRIHTGYKPYTCKFCSKTFTHRERLKEHERVHTGEKPFVCKFCEKGFTQRSSLRIHERTHTGERPYVCRLCSKGPSAARARREGLGWDENIGYTLALGWSRVTSASVYCRHDGIHERLVSGWRGSAEGHLTRRLANSDLLVKEEPTITVFARGTRAEQENSEIKAMLRRKRRRELRNQKRLKQNNDLDKAGDVNEVNQAIECEICDKTFKDNVDFGLHSIEHSADKKFSCHMCKYTCVSKFHFKKHIRAHELNTQHKCEICEQAFVRKTCALEHKYFHTGEKPFQCEVCGKNFMYSRLLAYHRRSQHWETVTGTPFVMYDCLICSKHYRSASGLKRHNITKHGDVDVEASVLCDVCGKRLSCGETLRLHRRIHTGYKPYTCKFCSKSFPNSERLKEHERVHTGEKPFACKFCKKGFTQRSSLKIHERTHTGERPYVCRLCGKGSAEAQLPRRLANSDLFVKEEPSVTVYARSKRAEQHNSENKAILRRKRRRELRNQKRLQQNDKRLKQSDDLDKAGDVNEVNQAIECEICDKTFKDNVDFGLHSIEHSANKKFSCHMCRYTCVSKFHFTMHIRAHEGNTQHKCEICKQAFVTRIYALEHKYFHTGEKPFQCEVCGKGFMYSRFLNSHRRSQHWEIMTGTPLVKYDCLICNKHYTSSSGLKRHKISKHDVVGAEISVLCDICGKRLASKENLKFHRRIHTGYKPHSCEFCSKSFTKKEQLKEHERVHTGERPFVCKFCDKGFTQRSSLRIHERTHTGERPYVCRLCGKGYISKGVMDIHMKNCQGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -