Dhop036204.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus hopei
Gene Symbol
-
Assembly
GCA_033060865.1
Location
CM065425.1:69700243-69714665[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 37 0.0088 0.97 11.5 3.8 1 23 200 222 200 222 0.98
2 37 0.0047 0.52 12.4 3.8 1 23 227 249 227 249 0.98
3 37 0.0012 0.13 14.3 2.0 1 23 288 310 288 310 0.98
4 37 0.00036 0.039 15.9 2.3 1 23 316 338 316 338 0.98
5 37 5.6e-05 0.0061 18.4 3.7 1 23 344 366 344 366 0.98
6 37 0.9 99 5.2 0.7 2 20 373 391 372 394 0.92
7 37 0.00086 0.095 14.7 0.8 1 23 428 450 428 450 0.98
8 37 7.4e-05 0.0082 18.0 0.6 1 23 456 478 456 478 0.99
9 37 0.003 0.33 13.0 1.5 1 23 484 506 484 506 0.96
10 37 0.00064 0.071 15.1 2.4 1 23 512 534 512 534 0.98
11 37 9.7e-07 0.00011 24.0 2.0 1 23 540 562 540 562 0.99
12 37 7.8e-05 0.0086 18.0 4.6 1 23 609 631 609 631 0.99
13 37 0.00024 0.027 16.4 2.1 1 23 637 659 637 659 0.98
14 37 0.005 0.56 12.3 2.2 1 23 665 687 665 687 0.99
15 37 0.0081 0.9 11.6 1.8 1 23 692 714 692 714 0.98
16 37 0.037 4.1 9.5 5.7 1 23 720 742 720 742 0.98
17 37 0.39 43 6.3 5.2 2 23 749 770 748 770 0.90
18 37 0.067 7.4 8.7 7.9 2 23 777 798 776 798 0.97
19 37 0.00024 0.026 16.4 1.7 1 23 802 824 802 824 0.99
20 37 0.0063 0.69 12.0 4.8 2 23 830 851 829 851 0.95
21 37 0.55 61 5.9 3.4 2 23 857 878 856 878 0.96
22 37 0.00071 0.078 14.9 0.3 2 23 910 931 909 931 0.97
23 37 0.00031 0.035 16.1 1.2 1 23 937 959 937 959 0.99
24 37 0.005 0.56 12.3 3.3 2 23 969 990 968 990 0.96
25 37 0.7 78 5.5 0.8 2 23 997 1019 996 1019 0.94
26 37 0.00011 0.013 17.4 0.7 1 23 1075 1097 1075 1097 0.99
27 37 0.016 1.8 10.7 3.1 1 23 1103 1125 1103 1125 0.99
28 37 0.00015 0.016 17.1 1.9 1 23 1131 1153 1131 1153 0.98
29 37 0.02 2.2 10.4 2.9 2 23 1160 1181 1159 1181 0.96
30 37 0.00027 0.029 16.3 1.9 1 23 1187 1209 1187 1209 0.98
31 37 0.00041 0.046 15.7 0.5 2 23 1216 1237 1215 1237 0.96
32 37 3.7e-05 0.0041 19.0 1.7 1 23 1243 1265 1243 1265 0.98
33 37 0.00027 0.03 16.3 2.7 2 23 1272 1293 1271 1293 0.97
34 37 0.0083 0.92 11.6 0.7 2 23 1300 1321 1299 1321 0.97
35 37 2.7e-05 0.003 19.4 0.4 2 23 1328 1349 1327 1349 0.97
36 37 0.00012 0.014 17.3 1.3 2 23 1356 1377 1355 1377 0.97
37 37 0.014 1.5 10.9 1.0 2 23 1384 1405 1383 1405 0.93

Sequence Information

Coding Sequence
ATGTCTCTGCAGAGGCTCGACCTGGATTACATCATCGATCTATACTTGATTCACATGCCAGTCTCCTTCTGGTATTGTCCGAAGACGTTCCAACCGTTGAGAAGCgaaggcggcacctttgatccgGACCTCACCAACGATAACATCGCAACGTGGAAGCGTCGGTTCATGACCTTGAGGATCGCTGCATTTCGGCTAGTTGGCGCCCTAATAAATTGTAACATCGGGATCGTTCCCCCCTTGTACGGGTTGACACTTGTGCGTTTTAATTATCGCACCGCACGGCCGTCTTCGCTGAGCTATTGGGAAGACAGCGAATCCATCCAAAAGAGAGCCACCcacacagGAAACAGAGCTGATGACGTAGAGAAATTCCTCCACATGTCTCTGCAGAGGCTCGACCTGGATTACATCATCGATCTATACTTGATTCACATGCCAGTCTCCTTCTGGTATTGTCCGAAGACGTTCCAACCGTTGAGAAGCgaaggcggcacctttgatccgGACCTCACCAACGATAACATCGCAACGTGGAAGTGCAGAAGATTAGAAAGTTTGAAAGAGCATTTCTTGACGCACAccggtgaaaaaccgtttaaGTGCAACAAATGCGATTATAAGTGCAGAGAGCGCAGGGCTTTAAATCTACACTTAAAGGCCCACATTGAACAGCCGTTCAGATGCAAGATGTGCGATTTTGGATGTGCAACTTCACGTGATTTAAAAACCCACAAGTTGACACACGCCGGCGAAATATCGTTCAAATGTGACAAgTCTTCCTCCGACTATATCGTTTCTTCAACCGACCTCACGACTCAAACAGTTAAAAAAAGCCACAGAAATAGAACTGAAAAATCGTTCGAATGCGCTCTCTGCGTTTACAAATGCAACAGCTCGTCGAACCTGAGGATTCACATGTtgaaacacaccggcgagaagccctTTAAATGTAACGTATGCGGCTACAAGTGCGGCTTACCTTCGTACTTAAGAAAGCACATGCTTCAGCACAACGGCGAAAAGGATTTCAAATGtaacctttgcgattacaagtgcagCGTACCTTCGTACTTAAGAAGGCACATGCTGAAGCACGACGCCGGAAAGGATCTCAAATGtaacctttgcgattacaagagCAACGTGCccaacaattttaaattgcacGTGTGGAAGCACACCCACGAGAAGTCGTACAAATGCGACTTATGTGATTACGGAAGCTGGTGGCCCAATGCTTTAAAAAGACACTCGCTGtcgcacaccggcgagaagccgttcaagTGTAGTATTTGTGACTTCCGCACCAAACTCAAGGCAGGCCTTAAGACGCACATGTTGATACACACCGATCAGAAGACGTTCAAATGTAGCTCCTGCGATTACGAGTCCGATCGAcccggaaatttgaaaacgcaCATGATGACACATTCCGAAGAAAAACCGTTCAAGTGTGACGTTTGCGAGTTCCGATGCAGGAGGCCCGGCGACTTGAAATCGCACGCGTTGCAACACAGCGACGAGAAGCCATTCGAATGTCAagtctgcgattataaatgtcgctGGGCCGCAAATTTAAGGAAGCACATGAGGAAACACCCCACGGAGATGCCGTACAAGTGTAATATCTGCGGTAGGAAATATCAGCGTTCCGGGAATTTAAAAAGGCATCTGATGAAGCATGGAGAACGAAAAGTAAAGGAGGATCCGAGCGAGAAAGAAACtttatgcAAAGAAAATATCTTGACGCATCTCTTTCCTAAAAGACGCGACGCCGAGGAACAACCGAAGCGGAGTAAAACCCGAAACGCCGAAAACCTGTTCAGATGCGTCATTTGCAATTACAGGTGCAAGCGGTCAACAAACTTAAAACTTCATATGATGACacacaccggcgaaaagccATACGAATGTAACGCGTGCGAACGCCGATACAGGAGCAGACACAACTTAAACTTGCACATATTGACGCACGCCGATGAGAAACAGTATAAATGCAACAGCTGCGAGTACAAGGCCCGGACGAGCAATGAATTAAGCCGGCACCTAAAGAAACACATCGAAAGATGGTTCGAATGTACCATTTGTGCTTACAAATGTAAAATTGCCGCTCGTTTAAAAAGACATATGATGACGCATACCGGCGACAAACCGTTCAAGTGTCACGTATGTAGCTTCGAATGTAGAAGAAGGACGACTTTACAAGATCACGCGTTAACGCATACCGGTGAGCAACCGTTAAAATGTGGCGTGTGCGAGTACAGATGCAGGACGCGCGAATCCTTGCGCAAGCATTGCATAAGACACAACGACGAGAAGCTACTGAAATGTACTCTGTGCGATTACACGAGCGTGCGACACTGTCACTTGAGGACGCACATGTTGAAACACACGAACTCATTCAAATGTAACGTCTGCAGTTACACGTCGACTTCGTCGAAGTTATTAGACAGACACATGAAAGTGCACGTCGACAAGCCACTCAAATGTGACGTTTGCGACTATCGTTGCAAGTACCGTAGCCATTTGAAAGCACATTCGGCGAAGCATGAtgctaaaaaattgaaatgcagCTTTTGCAATTACAAATGTACCCTGCCAACACTTTTCAAACAACACGAGGCGACTCACGCAAAATGTGACGCACCCGGAGATCTGAAGCAACACACTATGACGCACACCGATGAAAACACCTTCAAAGTTTCTGTGAGCGAAAAACTTCTGACATGTGACCTCTGTGATTACAAAACGCGGAGCGCCGGGAACTTGAGAGTCCATCGGGCGacacacacggacgagaaaCGGTACAAGTGCGGTACTTGCGGCGAAAAGTTTAAATATCCTCAAGTTTTCAAAAGTCACATGATTAAACACATGGACGTGAAGCCGGAGAAACCGTTGAAGTGCAACTCTTGCGATTATCGTTGCGACTTTCCGTCGCAATTAAAGAAGCATCTTATGCAACACACCGGTGAAAAACCGCTCAAGTGTGAACTGTGCGATTACCGTACCATTTGGACCTCGACTTTAAAAAGGCATGTGTCGAAGAATCACACCGACATCAAACCGAACGGAAATGTAGACGAGTCGAGGCGTATTAACGAGACCGACTTGGAGAATAATACTTTTGGTAAACGTCGGGTCGTCGCTTTGGCTCGTTGCGTAGAGCCATCTGCAAGCAAACGTCTGAAATCTCGGAAGTGTTACCGCGAAAAGTGGTACAGATGCGATCTTTGCGGTTACAAGAGCAACAGGCCCGGGAAGTTAAAAACTCACATAATGAGACACACCGGTGAAAAGCCTTTCAAATGTAATCTTTGCGAGTTTAAATGTGTGACGTCGGCAGGTCTAAAATATCACACTATGACGCACACCGGTGAAAGACTATTTAAGTGCAACAAGTGCGATTACAGTGCCGCAACCCGTACAAATTTACGCCGGCACTTATTTATGCATAGTAACGAAGAGCCGCTTAGATGTTACAGGTGTGATTATAGTACTAAAATCCATGAGAATTTACGTCGGCACATTCTGAGACACGGTCATGAAAAACCCTTCAAATGTAACATGTGCGATTATAGGGGCAAGACGCGTGACAATTTACGTCAACACGTGTCGAGGCATAGTAGTAAAAAAACCTTAAAGTGTGACATGTGCGATTACAGTAGCGACACGCCTCGCAATTTACGGCGTCACGCATTGAGACATACCGAGGAAGAACCCTTCAAGTGTGACATGTGCGATTACAGTGGCAAAACGCTCGACAATTTACGTCGACACATGTTTAGACATAGTAACGAAACGCCCTTGAAATGTGACATGTGCGATTACAGTAGCAGAACGCCTTGCAATCTACGGCGACACCTACTGAGACATAAGAAGAAGGAACTCTTAAAATGTAACGTGTGCGATTACAGCGACACATCGCTTGCCAAATTACGTCGACACATGCTGAGACATGAGAAGGAAGAACTCTTAAAATGTAACTCGTGCGATTACACAGGCACAACGCCTGCCAATTTACGTCGGCACATGTTGACACATACCGACGAAGAGCCCTTAAAATGTAATATGTGCGATTACAGTGGCAAATCGCGTGAATATTTACGTCGGCACATGCTGAGACATGCCGACCAAAAAGTAAAGGAATGTAACGTTTGTGATTTCAAAAGCTTATCATCTGGCAATCTAAAAGAACATATGCGTAAACACACGAATTAA
Protein Sequence
MSLQRLDLDYIIDLYLIHMPVSFWYCPKTFQPLRSEGGTFDPDLTNDNIATWKRRFMTLRIAAFRLVGALINCNIGIVPPLYGLTLVRFNYRTARPSSLSYWEDSESIQKRATHTGNRADDVEKFLHMSLQRLDLDYIIDLYLIHMPVSFWYCPKTFQPLRSEGGTFDPDLTNDNIATWKCRRLESLKEHFLTHTGEKPFKCNKCDYKCRERRALNLHLKAHIEQPFRCKMCDFGCATSRDLKTHKLTHAGEISFKCDKSSSDYIVSSTDLTTQTVKKSHRNRTEKSFECALCVYKCNSSSNLRIHMLKHTGEKPFKCNVCGYKCGLPSYLRKHMLQHNGEKDFKCNLCDYKCSVPSYLRRHMLKHDAGKDLKCNLCDYKSNVPNNFKLHVWKHTHEKSYKCDLCDYGSWWPNALKRHSLSHTGEKPFKCSICDFRTKLKAGLKTHMLIHTDQKTFKCSSCDYESDRPGNLKTHMMTHSEEKPFKCDVCEFRCRRPGDLKSHALQHSDEKPFECQVCDYKCRWAANLRKHMRKHPTEMPYKCNICGRKYQRSGNLKRHLMKHGERKVKEDPSEKETLCKENILTHLFPKRRDAEEQPKRSKTRNAENLFRCVICNYRCKRSTNLKLHMMTHTGEKPYECNACERRYRSRHNLNLHILTHADEKQYKCNSCEYKARTSNELSRHLKKHIERWFECTICAYKCKIAARLKRHMMTHTGDKPFKCHVCSFECRRRTTLQDHALTHTGEQPLKCGVCEYRCRTRESLRKHCIRHNDEKLLKCTLCDYTSVRHCHLRTHMLKHTNSFKCNVCSYTSTSSKLLDRHMKVHVDKPLKCDVCDYRCKYRSHLKAHSAKHDAKKLKCSFCNYKCTLPTLFKQHEATHAKCDAPGDLKQHTMTHTDENTFKVSVSEKLLTCDLCDYKTRSAGNLRVHRATHTDEKRYKCGTCGEKFKYPQVFKSHMIKHMDVKPEKPLKCNSCDYRCDFPSQLKKHLMQHTGEKPLKCELCDYRTIWTSTLKRHVSKNHTDIKPNGNVDESRRINETDLENNTFGKRRVVALARCVEPSASKRLKSRKCYREKWYRCDLCGYKSNRPGKLKTHIMRHTGEKPFKCNLCEFKCVTSAGLKYHTMTHTGERLFKCNKCDYSAATRTNLRRHLFMHSNEEPLRCYRCDYSTKIHENLRRHILRHGHEKPFKCNMCDYRGKTRDNLRQHVSRHSSKKTLKCDMCDYSSDTPRNLRRHALRHTEEEPFKCDMCDYSGKTLDNLRRHMFRHSNETPLKCDMCDYSSRTPCNLRRHLLRHKKKELLKCNVCDYSDTSLAKLRRHMLRHEKEELLKCNSCDYTGTTPANLRRHMLTHTDEEPLKCNMCDYSGKSREYLRRHMLRHADQKVKECNVCDFKSLSSGNLKEHMRKHTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-