Dhop036640.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dorcus hopei
Gene Symbol
ZFX
Assembly
GCA_033060865.1
Location
CM065425.1:75626667-75640805[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 36 0.0058 0.64 12.1 4.2 1 23 63 85 63 85 0.98
2 36 0.0014 0.16 14.0 0.5 2 23 110 131 109 131 0.96
3 36 1.7e-05 0.0019 20.1 0.5 1 23 135 157 135 157 0.99
4 36 0.00025 0.028 16.4 6.7 1 23 163 185 163 185 0.98
5 36 0.00072 0.08 14.9 0.5 1 23 191 213 191 213 0.98
6 36 0.00083 0.092 14.7 2.1 1 23 219 241 219 241 0.96
7 36 0.0011 0.12 14.3 0.2 2 20 248 266 247 267 0.95
8 36 0.057 6.4 8.9 2.1 1 23 300 322 300 322 0.97
9 36 5.5e-05 0.0061 18.4 1.6 1 23 326 348 326 348 0.99
10 36 5e-05 0.0056 18.6 2.1 1 23 354 376 354 376 0.99
11 36 0.0015 0.16 14.0 0.5 1 23 382 404 382 404 0.98
12 36 8.4e-05 0.0093 17.9 1.2 1 23 410 432 410 432 0.99
13 36 0.037 4.1 9.5 0.6 2 21 439 458 438 458 0.94
14 36 0.12 14 7.9 1.2 2 23 527 548 526 548 0.96
15 36 6e-05 0.0066 18.3 1.3 1 23 552 574 552 574 0.99
16 36 0.00012 0.013 17.4 4.1 1 23 580 602 580 602 0.98
17 36 0.00024 0.027 16.4 0.4 1 23 608 630 608 630 0.97
18 36 0.00086 0.095 14.7 3.3 1 23 636 658 636 658 0.97
19 36 0.00099 0.11 14.5 0.2 2 23 665 686 664 686 0.96
20 36 0.0007 0.078 15.0 2.0 1 23 692 715 692 715 0.95
21 36 0.0014 0.15 14.0 0.8 1 23 756 778 756 779 0.96
22 36 4.9e-05 0.0055 18.6 1.2 2 23 792 813 791 813 0.97
23 36 0.0031 0.34 12.9 3.3 1 23 824 846 824 846 0.96
24 36 0.00075 0.083 14.9 2.0 1 23 852 875 852 875 0.97
25 36 5.9e-06 0.00065 21.5 1.9 1 23 887 909 887 909 0.99
26 36 0.0016 0.18 13.8 1.1 1 23 914 936 914 936 0.97
27 36 0.00013 0.015 17.2 1.5 1 23 949 971 949 971 0.98
28 36 0.00038 0.042 15.8 3.6 1 23 982 1004 982 1004 0.98
29 36 0.072 8 8.6 4.8 1 23 1010 1032 1010 1032 0.97
30 36 0.0018 0.2 13.7 0.6 1 23 1045 1067 1045 1067 0.98
31 36 0.091 10 8.3 1.4 1 23 1073 1095 1073 1095 0.98
32 36 3e-05 0.0033 19.3 1.6 1 23 1101 1123 1101 1123 0.96
33 36 0.0014 0.15 14.1 0.8 1 23 1129 1151 1129 1151 0.98
34 36 0.00045 0.05 15.6 4.4 1 23 1157 1179 1157 1179 0.98
35 36 4.6e-06 0.00051 21.8 2.0 1 23 1185 1207 1185 1207 0.98
36 36 0.0018 0.2 13.6 3.1 1 23 1213 1236 1213 1236 0.96

Sequence Information

Coding Sequence
ATGGCCGGTCAAACGGCTGCAGCCGATAACGATTCCCAGGAAGCACAGCAATGCGTAAAGCGTGAGTTGGGAGTAGGGCTACCACACGAGATTGTAACCCAGTCGCAGAGTCAATTgtTGACCTCAAAAAGTACTCGCCCCGAAGTTTCGAGAGTCTCTCTTATCAAGGACAAGCAAACGAAACTGTTTAGTTGTCAACACTGCGACTACAAATCAAACCGTTCCTATTCCGTGAAGAGACATGTTTTGACGCACTTCAAGGGAGACCTACTCGTATGCGAGTTGAAACCTTTAAAAACGCACGCGAAGGAAGTTAAAAAACAACTGGTGTGTCAGATTTGCGGTTATAAAACGGATAAACTCTCGTATCTCAAGAGGCACGTCGAGAGACATCAGAAATCGTATCAGTGCGATCGCTGCGGCAACACGTTCAACGCACCTGAAAGCTTGCAATCGCATATGAGGCGACACACCGGGGAGAAACCGTACAGGTGcaacctttgcgattataaatgtacCCAATCCAGTCACCTCTCGACACATATGAAGctgcacaccggcgagaagcctttTCAGTGTGACAAGTGTGATTACAGAGCTGCCCTGAAAGGCAACCTCACGAAACATATGGTTAAGCATTTCGCGGAGAGGCCGTTCGCGTGTAACCTCTGcgattttaaaacgaaaacCTCCAAGAGTTTGAAGAGACATTTGAAGGCGCACACGGGCGAGAGGACGATAGAATGTAGCGTTTGCACTAAGCGATTCGTTAATTCGAAGGACATAAAGAGGCATATGTTGCCCAACGTCAAAGCTATTTCAATCCCCTCATCATTTTCTTCCGTCGAAAACGAGTTGAAACACACTAGGAAACTTACGAGGGAAGTTAAAAAGCAATTCGTATGTGAGACTTGCGATTATAAAGCGGACAAACTTTGGCATCTCAGGAGGCACTTCAACAGTCACGAGAAACCGTATCAGTGCGATCGCTGCGGCAACACGTTCACCGCACTTGCCCATTTGAAGTCCCATATGAGGCTACATACCGGGGAAAAACCGTATAAGTGCAAGCTTTGCGATTATGAATCTATTCAATCCTCTCACCTCTGGACACATATGAGGCTACATTCCGGCGCGAGGCCTTTTCAGTGTGACAAGTGCGATTACAGAGCTGCTCTGAAAAGTGGCCTCACGAAACATATGGTCAGACATTCCGCGGAAAAGCCGTTCAAGTGTAAGCTTTGCGATTTTGAAACGAAAACCTCCGGGGATTTAAACAGACATTTAAAGGTGCACACGGGCGAGAAGGCTTTAGAATGTGGCGTTTGCGCCAAAAGATTCGGCAATTCGAAGGATATAAAAAGGCATATGTGCCCCAACGTCGAAGCTATTTCAATCCCCTCATCATTTTCTTCCGTCGAAAAAAtgcaaattataaaaacagatCCTGATCTACTCTTATGCGAGTTGGAAACTTCAAACACTGAAATACTGGGAATTGTAAAAACAGATCCTGATCCACTCGTACGCGAGTTGAAACCTTCAAAGAAACACACGAGGGAAGTTAAAAAGCAACTCGTATGTGAGACTTGCGATTTTAAAGCGGACAAACTTTGGCATCTCAAGAGGCACCTCAGCAGTCACGAGAAACCGTACCAGTGTGATCGCTGCGGCAACACGTTCACCGCACTTGCCCACTTGAACTCGCATATGAGGCTACACACCGGGGAAAAACCGTATAAGTGCAACCTTTGCGATTACGAATGTATTCAGTCCTCTCACCTCTGGACACATATGAAGCTACACACCGGCGCGAAGCCGTTTCAGTGTGACAAGTGCGATTACAGAGCTGCTCTGAAAAGCAACCTCACGAAACATATGGTCATACATTTCGCGGAGAAGCCGTTCGAGTGTAACTTCTGcgattttaaaacgaaaacCTCCAAGAGTTTGAAGAGACATTTGAAGGCGCACACGGGCGAGAAGGCGTTAGAATGTGGCGTTTGCGCTAAAAGATTCGGTAATTCGAAGGACGTAAAACGGCATATGTTAATACATACGGGGAAGAAACCGTTCGCGTGCAGCCTGTGCGATTATAGATCAACTCAGGCGGCAAATCTAAAATCGCATATGAAGCACAGACACAAACAGTTGCCTAACGTCGAAGGTATTTCTATCCCTTCCGTAGAGGAAATACGCGGTTACGAAACGAATCGTGCCCGTACTCCGAAGAAGCACGTTTTCAGGCATACCGGCGAAAAGCCGTACGAATGTAAATCGTGCGACTACAGGAGTGCTATGCCTGGAAATCTCAGGAAGCACGTGAGGGCACATCACGCTAAGGCAAAAGGCAAAGCGACCGAGTCTGATTTGACATGCGAGATTTGCGATTTTAAAACGACGCAAGCCGATTACTTGAGGAAGCACATGAAGAGACACGGCGATCAGAAACCGGGCCAGAGCTTGAAGTTCAATTGTCAGTACTGTGATTATAAGACGAATCGGGCCTACACCCTCAAGAAGCATGTTTTTAGGCACACCGGCGAAAAACCGTACGCGTGTAAATTGTGCGAGTACAGGTGCACCATGTCTGGAAGCCTCAACCGGCACATCAGGGTTCGTCATGCGAATCAAAAGGGCACAGGAGCCGAATCTGGGTTCACATGTGAGATTTGTGATTTCAAAACGACGCAAGCCGATTATTTGAAGAGGCACATGAGAAAGCACGGCGATCAGCGATTTGCCTGTAAATTGTGCGATTACCGAGGCACCGAGTCCAGAAACTTCAAGAGGCACATGATAATGCACGAGGTAAAGGAGAAAGGCGAAGGATATGAATATAAATTCACGTGCAAGATTTGTGGTTTTAAAACCATTCTAGCTAGTTACCTGAACAAACACATGAAGCGACACAGTGGTCACAAACCATCTAATGGTGTGTGGCACAAATGTGACTATTGCGATTATAAGTCGAGTCTCCCCTCCACTCTCAGGAAACATATGTATACCCATAgtggtgagaagccgttcgcATGTAAATCGTGCAGTTACAGATCCTGCACGTCCGGAAGCCTCCGAAGGCACTCGAAGACGCACATGGCGAAAGAAAAAGTCCAGGATGCTGACAAGAAATTCATGTGTGATGTCTGCAGTTTCAAAACCACGACGGCCAGATACCTGGCGAAACACATGTTGATACACAGCGTTGACAAGTCGTTCCAATGCGATCGCTGCGGCGACAAATTCTCGTCGAATACCATTTTGAAAATGCATACAATGCGACATACCGGGGAGAAACCGTACGAGTGCAACATTTGCGGCTATAAGTGCACCCAAAGCGGCTCGCTGAAACGTCACCTCGTGCTGCACACCGGCGTGAAAACCTTTCAGTGTAACAAGTGCGATTATAAGGCTGCCCTAAAAGGTACCCTCACGAAGCACATGGCTAAACACTCCACGGAGAAGCCGTTCGAGTGCAACGTCTGTAAATACAAGACGAAAACCTCTAATCATTTAAAAAGCCACATGCTATCGCACACCGGCGAGCAGTTGTATAAATGTAACATCTGTAATAAAGGATTCTCTCGCAACAAAGATATGAAGAAGCATACGTTGATACACACAGGAGAGAAACCGTTCGCGTGTAATTTATGCGATTACAGATCTACGCAGAAGTCGAACGTGAAGATACATATGAAGCACAGACATAAggaatgtttttttaatgaatttagtGCAAGTAAAATTGAAGCAACGCAAGACGATTGA
Protein Sequence
MAGQTAAADNDSQEAQQCVKRELGVGLPHEIVTQSQSQLLTSKSTRPEVSRVSLIKDKQTKLFSCQHCDYKSNRSYSVKRHVLTHFKGDLLVCELKPLKTHAKEVKKQLVCQICGYKTDKLSYLKRHVERHQKSYQCDRCGNTFNAPESLQSHMRRHTGEKPYRCNLCDYKCTQSSHLSTHMKLHTGEKPFQCDKCDYRAALKGNLTKHMVKHFAERPFACNLCDFKTKTSKSLKRHLKAHTGERTIECSVCTKRFVNSKDIKRHMLPNVKAISIPSSFSSVENELKHTRKLTREVKKQFVCETCDYKADKLWHLRRHFNSHEKPYQCDRCGNTFTALAHLKSHMRLHTGEKPYKCKLCDYESIQSSHLWTHMRLHSGARPFQCDKCDYRAALKSGLTKHMVRHSAEKPFKCKLCDFETKTSGDLNRHLKVHTGEKALECGVCAKRFGNSKDIKRHMCPNVEAISIPSSFSSVEKMQIIKTDPDLLLCELETSNTEILGIVKTDPDPLVRELKPSKKHTREVKKQLVCETCDFKADKLWHLKRHLSSHEKPYQCDRCGNTFTALAHLNSHMRLHTGEKPYKCNLCDYECIQSSHLWTHMKLHTGAKPFQCDKCDYRAALKSNLTKHMVIHFAEKPFECNFCDFKTKTSKSLKRHLKAHTGEKALECGVCAKRFGNSKDVKRHMLIHTGKKPFACSLCDYRSTQAANLKSHMKHRHKQLPNVEGISIPSVEEIRGYETNRARTPKKHVFRHTGEKPYECKSCDYRSAMPGNLRKHVRAHHAKAKGKATESDLTCEICDFKTTQADYLRKHMKRHGDQKPGQSLKFNCQYCDYKTNRAYTLKKHVFRHTGEKPYACKLCEYRCTMSGSLNRHIRVRHANQKGTGAESGFTCEICDFKTTQADYLKRHMRKHGDQRFACKLCDYRGTESRNFKRHMIMHEVKEKGEGYEYKFTCKICGFKTILASYLNKHMKRHSGHKPSNGVWHKCDYCDYKSSLPSTLRKHMYTHSGEKPFACKSCSYRSCTSGSLRRHSKTHMAKEKVQDADKKFMCDVCSFKTTTARYLAKHMLIHSVDKSFQCDRCGDKFSSNTILKMHTMRHTGEKPYECNICGYKCTQSGSLKRHLVLHTGVKTFQCNKCDYKAALKGTLTKHMAKHSTEKPFECNVCKYKTKTSNHLKSHMLSHTGEQLYKCNICNKGFSRNKDMKKHTLIHTGEKPFACNLCDYRSTQKSNVKIHMKHRHKECFFNEFSASKIEATQDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00465606;
90% Identity
iTF_00465606;
80% Identity
iTF_00465606;